RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 TREX1Q9NSU2 369 aa7.04□□□□□ -1.28
HMGCS2-204ENST00000544913 GEMIN8Q9NWZ8 242 aaKnown RBP7.04□□□□□ -1.28
HMGCS2-204ENST00000544913 DEC1Q9P2X7 70 aa7.04□□□□□ -1.28
HMGCS2-204ENST00000544913 EVLQ9UI08 416 aaPredicted RBP7.04□□□□□ -1.28
HMGCS2-204ENST00000544913 PCDHGC4Q9Y5F7 938 aa7.04□□□□□ -1.28
HMGCS2-204ENST00000544913 WASF2Q9Y6W5 498 aa7.04□□□□□ -1.28
HMGCS2-204ENST00000544913 A0A0U1RQS6 177 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 MROH6A6NGR9 719 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 SDR42E2A6NKP2 422 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 AURKAO14965 403 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 PSMD3O43242 534 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 SPINT1O43278 529 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 LDB2O43679 373 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 MGRN1O60291 552 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 SPAG7O75391 227 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 ALDH1A2O94788 518 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 PIGNO95427 931 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 SRPRAP08240 638 aaKnown RBP7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 SERPINF2P08697 491 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 FOXN2P32314 431 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 CCNHP51946 323 aaPredicted RBP7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 METAP1P53582 386 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 SULT2A1Q06520 285 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 CDK18Q07002 472 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 CDH17Q12864 832 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 GALNT3Q14435 633 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 EIF4HQ15056 248 aaKnown RBP7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 SKIV2LQ15477 1246 aaKnown RBP7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 SNCBQ16143 134 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 CDKN3Q16667 212 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 KBTBD12Q3ZCT8 623 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 C2orf27AQ580R0 203 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 RALGPS1Q5JS13 557 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 C9orf64Q5T6V5 341 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 EGFLAMQ63HQ2 1017 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 FSTL4Q6MZW2 842 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 CYB5D1Q6P9G0 228 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 TIFABQ6ZNK6 161 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 KDELC2Q7Z4H8 507 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 CCDC117Q8IWD4 279 aaPredicted RBP7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 PARP9Q8IXQ6 854 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 PLPP6Q8IY26 295 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 PIP4P2Q8N4L2 257 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 PCDH20Q8N6Y1 951 aaKnown RBP7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 TCP10LQ8TDR4 215 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 ACMSDQ8TDX5 336 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 NSMCE1Q8WV22 266 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 PIH1D2Q8WWB5 315 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 ZNF75CPQ92670 426 aaPredicted RBP7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 EID2BQ96D98 161 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 STAMBPL1Q96FJ0 436 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 PPP1R2P1Q96PQ5 205 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 TACO1Q9BSH4 297 aaKnown RBP7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 KIFC1Q9BW19 673 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 MANSC1Q9H8J5 431 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 BRD9Q9H8M2 597 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 ZDHHC4Q9NPG8 344 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 MOCS1Q9NZB8 636 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 THAP10Q9P2Z0 257 aaPredicted RBP7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 CHKBQ9Y259 395 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 RAI2Q9Y5P3 530 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 SCN8AQ9UQD0 1980 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 BDP1A6H8Y1 2624 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 NCOR1O75376 2440 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 A0A1W2PPM1 405 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 TSPAN11A1L157 253 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 MAGEB16A2A368 324 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 CXorf49A8MYA2 514 aaPredicted RBP7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 SPECC1L-ADORA2AF8WAN1 911 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 PGLSO95336 258 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 NDST3O95803 873 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 ASLP04424 464 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 DHRS4L1P0CG22 281 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 POLR2EP19388 210 aaKnown RBP7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 CES1P23141 567 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 GRIA2P42262 883 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 IL12RB1P42701 662 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 ARCN1P48444 511 aaKnown RBP7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 GALK1P51570 392 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 ZP2Q05996 745 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 ITKQ08881 620 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 FRG1Q14331 258 aaKnown RBP7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 PRPSAP1Q14558 356 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 ZNF234Q14588 700 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 CRYMQ14894 314 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 MYLK3Q32MK0 819 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 CARD16Q5EG05 197 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 SWT1Q5T5J6 900 aaKnown RBP7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 ARMC3Q5W041 872 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 ATG16L1Q676U5 607 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 CES3Q6UWW8 571 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 CAPN12Q6ZSI9 719 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 CCDC91Q7Z6B0 441 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 METTL3Q86U44 580 aaKnown RBP7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 YAF2Q8IY57 180 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 C4orf33Q8N1A6 199 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 TTC30BQ8N4P2 665 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 KDM1BQ8NB78 822 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 OR13J1Q8NGT2 312 aa7.03□□□□□ -1.28
HMGCS2-204ENST00000544913 INPP5DQ92835 1189 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms