RNA–Protein interactions for RNA: ENST00000544588.1

CIT-214, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-214ENST00000544588 RFX6Q8HWS3 928 aa13.2□□□□□ -0.3
CIT-214ENST00000544588 CCDC13Q8IYE1 715 aa13.2□□□□□ -0.3
CIT-214ENST00000544588 PQLC3Q8N755 202 aa13.2□□□□□ -0.3
CIT-214ENST00000544588 FAM181AQ8N9Y4 354 aa13.2□□□□□ -0.3
CIT-214ENST00000544588 IFI44Q8TCB0 444 aa13.2□□□□□ -0.3
CIT-214ENST00000544588 SCG3Q8WXD2 468 aaKnown RBP13.2□□□□□ -0.3
CIT-214ENST00000544588 RFFLQ8WZ73 363 aa13.2□□□□□ -0.3
CIT-214ENST00000544588 NUS1Q96E22 293 aa13.2□□□□□ -0.3
CIT-214ENST00000544588 WDR92Q96MX6 357 aa13.2□□□□□ -0.3
CIT-214ENST00000544588 LRRC61Q9BV99 259 aa13.2□□□□□ -0.3
CIT-214ENST00000544588 SALL4Q9UJQ4 1053 aa13.2□□□□□ -0.3
CIT-214ENST00000544588 PNMA8BQ9ULN7 279 aaPredicted RBP13.2□□□□□ -0.3
CIT-214ENST00000544588 LMO7DNF2Z398 122 aa13.19□□□□□ -0.3
CIT-214ENST00000544588 TPP1O14773 563 aa13.19□□□□□ -0.3
CIT-214ENST00000544588 APOL1O14791 398 aa13.19□□□□□ -0.3
CIT-214ENST00000544588 OPA1O60313 960 aa13.19□□□□□ -0.3
CIT-214ENST00000544588 HEXIM1O94992 359 aaKnown RBP13.19□□□□□ -0.3
CIT-214ENST00000544588 JCHAINP01591 159 aa13.19□□□□□ -0.3
CIT-214ENST00000544588 CELA2BP08218 269 aaPredicted RBP13.19□□□□□ -0.3
CIT-214ENST00000544588 KELP23276 732 aa13.19□□□□□ -0.3
CIT-214ENST00000544588 SLC1A1P43005 524 aa13.19□□□□□ -0.3
CIT-214ENST00000544588 DYNLT1P63172 113 aa13.19□□□□□ -0.3
CIT-214ENST00000544588 AP1B1Q10567 949 aa13.19□□□□□ -0.3
CIT-214ENST00000544588 SLC10A2Q12908 348 aaPredicted RBP13.19□□□□□ -0.3
CIT-214ENST00000544588 TBX2Q13207 712 aaPredicted RBP13.19□□□□□ -0.3
CIT-214ENST00000544588 CAMK2BQ13554 666 aa13.19□□□□□ -0.3
CIT-214ENST00000544588 PTPRRQ15256 657 aa13.19□□□□□ -0.3
CIT-214ENST00000544588 SPA17Q15506 151 aa13.19□□□□□ -0.3
CIT-214ENST00000544588 CNGA3Q16281 694 aa13.19□□□□□ -0.3
CIT-214ENST00000544588 PNCKQ6P2M8 343 aa13.19□□□□□ -0.3
CIT-214ENST00000544588 GUSBP11Q6P575 273 aa13.19□□□□□ -0.3
CIT-214ENST00000544588 SARM1Q6SZW1 724 aa13.19□□□□□ -0.3
CIT-214ENST00000544588 CRTC1Q6UUV9 634 aa13.19□□□□□ -0.3
CIT-214ENST00000544588 FSTL5Q8N475 847 aaPredicted RBP13.19□□□□□ -0.3
CIT-214ENST00000544588 TEX26Q8N6G2 289 aa13.19□□□□□ -0.3
CIT-214ENST00000544588 FUBP1Q96AE4 644 aaKnown RBP13.19□□□□□ -0.3
CIT-214ENST00000544588 CLPBQ9H078 707 aa13.19□□□□□ -0.3
CIT-214ENST00000544588 WDR26Q9H7D7 661 aa13.19□□□□□ -0.3
CIT-214ENST00000544588 SYNDIG1Q9H7V2 258 aa13.19□□□□□ -0.3
CIT-214ENST00000544588 USP29Q9HBJ7 922 aa13.19□□□□□ -0.3
CIT-214ENST00000544588 NCKIPSDQ9NZQ3 722 aa13.19□□□□□ -0.3
CIT-214ENST00000544588 SEPT10Q9P0V9 454 aa13.19□□□□□ -0.3
CIT-214ENST00000544588 SIRPGQ9P1W8 387 aa13.19□□□□□ -0.3
CIT-214ENST00000544588 CHKBQ9Y259 395 aa13.19□□□□□ -0.3
CIT-214ENST00000544588 RAXQ9Y2V3 346 aa13.19□□□□□ -0.3
CIT-214ENST00000544588 A0A0U1RQS6 177 aa13.18□□□□□ -0.3
CIT-214ENST00000544588 KCNK1O00180 336 aa13.18□□□□□ -0.3
CIT-214ENST00000544588 PDE2AO00408 941 aaPredicted RBP13.18□□□□□ -0.3
CIT-214ENST00000544588 PDHA1P08559 390 aa13.18□□□□□ -0.3
CIT-214ENST00000544588 ALPIP09923 528 aa13.18□□□□□ -0.3
CIT-214ENST00000544588 COMTP21964 271 aa13.18□□□□□ -0.3
CIT-214ENST00000544588 CES1P23141 567 aa13.18□□□□□ -0.3
CIT-214ENST00000544588 ETV3P41162 512 aa13.18□□□□□ -0.3
CIT-214ENST00000544588 AGERQ15109 404 aa13.18□□□□□ -0.3
CIT-214ENST00000544588 LLGL1Q15334 1064 aa13.18□□□□□ -0.3
CIT-214ENST00000544588 C19orf48Q6RUI8 117 aa13.18□□□□□ -0.3
CIT-214ENST00000544588 NYAP1Q6ZVC0 841 aa13.18□□□□□ -0.3
CIT-214ENST00000544588 HSD11B1LQ7Z5J1 315 aa13.18□□□□□ -0.3
CIT-214ENST00000544588 TAF8Q7Z7C8 310 aa13.18□□□□□ -0.3
CIT-214ENST00000544588 TSPAN33Q86UF1 283 aa13.18□□□□□ -0.3
CIT-214ENST00000544588 GKN2Q86XP6 184 aa13.18□□□□□ -0.3
CIT-214ENST00000544588 RHOT1Q8IXI2 618 aa13.18□□□□□ -0.3
CIT-214ENST00000544588 TC2NQ8N9U0 490 aa13.18□□□□□ -0.3
CIT-214ENST00000544588 OR56A4Q8NGH8 313 aa13.18□□□□□ -0.3
CIT-214ENST00000544588 TPCN2Q8NHX9 752 aa13.18□□□□□ -0.3
CIT-214ENST00000544588 PIH1D2Q8WWB5 315 aa13.18□□□□□ -0.3
CIT-214ENST00000544588 MAML1Q92585 1016 aa13.18□□□□□ -0.3
CIT-214ENST00000544588 FAF2Q96CS3 445 aa13.18□□□□□ -0.3
CIT-214ENST00000544588 NXPE2Q96DL1 559 aa13.18□□□□□ -0.3
CIT-214ENST00000544588 SCRN2Q96FV2 425 aa13.18□□□□□ -0.3
CIT-214ENST00000544588 TSGA13Q96PP4 275 aa13.18□□□□□ -0.3
CIT-214ENST00000544588 LGMNQ99538 433 aa13.18□□□□□ -0.3
CIT-214ENST00000544588 CYP4F12Q9HCS2 524 aa13.18□□□□□ -0.3
CIT-214ENST00000544588 MRPL40Q9NQ50 206 aaKnown RBP13.18□□□□□ -0.3
CIT-214ENST00000544588 DTLQ9NZJ0 730 aa13.18□□□□□ -0.3
CIT-214ENST00000544588 INTUQ9ULD6 942 aa13.18□□□□□ -0.3
CIT-214ENST00000544588 GPR34Q9UPC5 381 aa13.18□□□□□ -0.3
CIT-214ENST00000544588 PLXNA2O75051 1894 aa13.18□□□□□ -0.3
CIT-214ENST00000544588 USP24Q9UPU5 2620 aa13.18□□□□□ -0.3
CIT-214ENST00000544588 LY6G6EA0A0G2JKS1 128 aa13.17□□□□□ -0.3
CIT-214ENST00000544588 TMEM202A6NGA9 273 aa13.17□□□□□ -0.3
CIT-214ENST00000544588 NPIPB15A6NHN6 443 aaPredicted RBP13.17□□□□□ -0.3
CIT-214ENST00000544588 MTA2O94776 668 aa13.17□□□□□ -0.3
CIT-214ENST00000544588 HLA-DQB2P05538 268 aa13.17□□□□□ -0.3
CIT-214ENST00000544588 ZFXP17010 805 aaPredicted RBP13.17□□□□□ -0.3
CIT-214ENST00000544588 CA4P22748 312 aa13.17□□□□□ -0.3
CIT-214ENST00000544588 CYLC1P35663 651 aaPredicted RBP13.17□□□□□ -0.3
CIT-214ENST00000544588 NAP1L1P55209 391 aaKnown RBP13.17□□□□□ -0.3
CIT-214ENST00000544588 C6orf132Q5T0Z8 1188 aa13.17□□□□□ -0.3
CIT-214ENST00000544588 FAM182AQ5T1J6 154 aa13.17□□□□□ -0.3
CIT-214ENST00000544588 KAZNQ674X7 775 aa13.17□□□□□ -0.3
CIT-214ENST00000544588 RAET1GQ6H3X3 334 aa13.17□□□□□ -0.3
CIT-214ENST00000544588 NPNTQ6UXI9 565 aa13.17□□□□□ -0.3
CIT-214ENST00000544588 Q6ZVL8 140 aa13.17□□□□□ -0.3
CIT-214ENST00000544588 B4GALNT4Q76KP1 1039 aa13.17□□□□□ -0.3
CIT-214ENST00000544588 SLC35F3Q8IY50 421 aa13.17□□□□□ -0.3
CIT-214ENST00000544588 LPCAT1Q8NF37 534 aa13.17□□□□□ -0.3
CIT-214ENST00000544588 HNRNPLLQ8WVV9 542 aaKnown RBP13.17□□□□□ -0.3
CIT-214ENST00000544588 OR1E3Q8WZA6 343 aa13.17□□□□□ -0.3
CIT-214ENST00000544588 HDAC11Q96DB2 347 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms