RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 AP1B1Q10567 949 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 PRPSAP1Q14558 356 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 NR0B2Q15466 257 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 SLC14A2Q15849 920 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 CA9Q16790 459 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 PRRT3Q5FWE3 981 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 ZDHHC20Q5W0Z9 365 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 SEL1L3Q68CR1 1132 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 C11orf63Q6NUN7 778 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 DPPA4Q7L190 304 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 RAB44Q7Z6P3 723 aaPredicted RBP5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 ZNF605Q86T29 641 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 NT5DC3Q86UY8 548 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 ARHGAP12Q8IWW6 846 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 CCDC13Q8IYE1 715 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 NRSN1Q8IZ57 195 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 LSMEM2Q8N112 164 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 EID2Q8N6I1 236 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 FAM181AQ8N9Y4 354 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 CCDC112Q8NEF3 446 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 OR2I1PQ8NGU4 316 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 OR4C6Q8NH72 309 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 TFB1MQ8WVM0 346 aaKnown RBP5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 KLK6Q92876 244 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 CENPTQ96BT3 561 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 FAF2Q96CS3 445 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 HDAC11Q96DB2 347 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 NUS1Q96E22 293 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 SCRN2Q96FV2 425 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 BTBD6Q96KE9 485 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 EXOC2Q96KP1 924 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 WDR92Q96MX6 357 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 RNF157Q96PX1 679 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 DEPDC7Q96QD5 511 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 BAG1Q99933 345 aaPredicted RBP5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 MYOCQ99972 504 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 ORAI3Q9BRQ5 295 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 TRIM7Q9C029 511 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 STN1Q9H668 368 aaKnown RBP5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 WDR26Q9H7D7 661 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 IL21RQ9HBE5 538 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 PDFQ9HBH1 243 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 NT5MQ9NPB1 228 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 FSCN3Q9NQT6 498 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 SPTLC3Q9NUV7 552 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 PKD2L2Q9NZM6 624 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 AKAP7Q9P0M2 348 aaPredicted RBP5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 LHX3Q9UBR4 397 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 APOBEC3BQ9UH17 382 aaKnown RBP5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 SALL4Q9UJQ4 1053 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 TRHDEQ9UKU6 1024 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 ZFR2Q9UPR6 939 aaKnown RBP5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 EFR3BQ9Y2G0 817 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 HEY1Q9Y5J3 304 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 EPN1Q9Y6I3 576 aaPredicted RBP5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 DOPEY1Q5JWR5 2465 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 MUC22E2RYF6 1773 aaPredicted RBP5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 PTPRBP23467 1997 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 DOPEY2Q9Y3R5 2298 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 PTPRQQ9UMZ3 2332 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 BTNL10A8MVZ5 291 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 MIF4GDA9UHW6 222 aaKnown RBP5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 GPR89AB7ZAQ6 455 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 LMO7DNF2Z398 122 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 TRAFD1O14545 582 aaPredicted RBP5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 RRP8O43159 456 aaKnown RBP5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 BUB1BO60566 1050 aaPredicted RBP5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 PPFIA2O75334 1257 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 TCEA3O75764 348 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 PIAS2O75928 621 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 RECQL5O94762 991 aaPredicted RBP5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 TJP3O95049 919 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 NDUFA10O95299 355 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 PGLSO95336 258 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 LCA5LO95447 670 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 JCHAINP01591 159 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 WNT1P04628 370 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 NTRK1P04629 796 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 GPR89BP0CG08 455 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 CKMT1AP12532 417 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 TNNT1P13805 278 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 COMTP21964 271 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 ACP1P24666 158 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 MSNP26038 577 aaKnown RBP5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 TEAD1P28347 426 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 GKP32189 559 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 HK3P52790 923 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 RWDD2BP57060 319 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 CLDN2P57739 230 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 KIAA1024LP59773 190 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 SRP54P61011 504 aaKnown RBP5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 PDE1BQ01064 536 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 IL9RQ01113 521 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 BNC1Q01954 994 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 PPIDQ08752 370 aaKnown RBP5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 SLC10A7Q0GE19 358 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 ILF3Q12906 894 aaKnown RBP eCLIP5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 TBX2Q13207 712 aaPredicted RBP5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 INPP5AQ14642 412 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 NFATC4Q14934 902 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms