RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 HNRNPA1L2Q32P51 320 aaKnown RBP30.51■■■□□ 2.48
CCM2-219ENST00000544363 OR4K2Q8NGD2 314 aa30.51■■■□□ 2.48
CCM2-219ENST00000544363 OR6P1Q8NGX9 317 aa30.51■■■□□ 2.48
CCM2-219ENST00000544363 GABPB2Q8TAK5 448 aaPredicted RBP30.51■■■□□ 2.48
CCM2-219ENST00000544363 CALML6Q8TD86 181 aa30.51■■■□□ 2.48
CCM2-219ENST00000544363 PPM1EQ8WY54 764 aa30.51■■■□□ 2.48
CCM2-219ENST00000544363 KLHL32Q96NJ5 620 aa30.51■■■□□ 2.48
CCM2-219ENST00000544363 PHF7Q9BWX1 381 aaPredicted RBP30.51■■■□□ 2.48
CCM2-219ENST00000544363 THAP10Q9P2Z0 257 aaPredicted RBP30.51■■■□□ 2.48
CCM2-219ENST00000544363 ADAM21Q9UKJ8 722 aa30.51■■■□□ 2.48
CCM2-219ENST00000544363 EDDM13A0A1B0GTR0 161 aa30.51■■■□□ 2.47
CCM2-219ENST00000544363 CCL22O00626 93 aa30.51■■■□□ 2.47
CCM2-219ENST00000544363 BMPR2Q13873 1038 aa30.51■■■□□ 2.47
CCM2-219ENST00000544363 ARSIQ5FYB1 569 aa30.51■■■□□ 2.47
CCM2-219ENST00000544363 GPR153Q6NV75 609 aa30.51■■■□□ 2.47
CCM2-219ENST00000544363 NDUFAF2Q8N183 169 aa30.51■■■□□ 2.47
CCM2-219ENST00000544363 HLA-CQ95604 372 aa30.51■■■□□ 2.47
CCM2-219ENST00000544363 SMC6Q96SB8 1091 aa30.51■■■□□ 2.47
CCM2-219ENST00000544363 RBBP8Q99708 897 aa30.51■■■□□ 2.47
CCM2-219ENST00000544363 SELENOSQ9BQE4 189 aa30.51■■■□□ 2.47
CCM2-219ENST00000544363 OSBPL1AQ9BXW6 950 aa30.51■■■□□ 2.47
CCM2-219ENST00000544363 TMEM245Q9H330 911 aa30.51■■■□□ 2.47
CCM2-219ENST00000544363 LIMD1Q9UGP4 676 aa30.51■■■□□ 2.47
CCM2-219ENST00000544363 TICRRQ7Z2Z1 1910 aa30.51■■■□□ 2.47
CCM2-219ENST00000544363 CAPN8A6NHC0 703 aa30.5■■■□□ 2.47
CCM2-219ENST00000544363 LEFTY1O75610 366 aa30.5■■■□□ 2.47
CCM2-219ENST00000544363 FOSL2P15408 326 aa30.5■■■□□ 2.47
CCM2-219ENST00000544363 SPRP35270 261 aaPredicted RBP30.5■■■□□ 2.47
CCM2-219ENST00000544363 HNF1BP35680 557 aa30.5■■■□□ 2.47
CCM2-219ENST00000544363 GALK1P51570 392 aa30.5■■■□□ 2.47
CCM2-219ENST00000544363 MROH9Q5TGP6 573 aa30.5■■■□□ 2.47
CCM2-219ENST00000544363 SUGP1Q8IWZ8 645 aaKnown RBP30.5■■■□□ 2.47
CCM2-219ENST00000544363 CDKN2AIPNLQ96HQ2 116 aa30.5■■■□□ 2.47
CCM2-219ENST00000544363 MCMBPQ9BTE3 642 aa30.5■■■□□ 2.47
CCM2-219ENST00000544363 GPR63Q9BZJ6 419 aa30.5■■■□□ 2.47
CCM2-219ENST00000544363 CNOT10Q9H9A5 744 aaKnown RBP30.5■■■□□ 2.47
CCM2-219ENST00000544363 KCNK12Q9HB15 430 aa30.5■■■□□ 2.47
CCM2-219ENST00000544363 FBRSL1Q9HCM7 1045 aaKnown RBP30.5■■■□□ 2.47
CCM2-219ENST00000544363 TRPV5Q9NQA5 729 aa30.5■■■□□ 2.47
CCM2-219ENST00000544363 SLC4A1P02730 911 aa30.49■■■□□ 2.47
CCM2-219ENST00000544363 CTSLP07711 333 aa30.49■■■□□ 2.47
CCM2-219ENST00000544363 HLA-EP13747 358 aa30.49■■■□□ 2.47
CCM2-219ENST00000544363 BRAT1Q6PJG6 821 aa30.49■■■□□ 2.47
CCM2-219ENST00000544363 SERPINA13PQ6UXR4 307 aa30.49■■■□□ 2.47
CCM2-219ENST00000544363 LYSMD3Q7Z3D4 306 aa30.49■■■□□ 2.47
CCM2-219ENST00000544363 DENND6AQ8IWF6 608 aa30.49■■■□□ 2.47
CCM2-219ENST00000544363 LMNTD2Q8IXW0 634 aa30.49■■■□□ 2.47
CCM2-219ENST00000544363 C2CD4AQ8NCU7 369 aaPredicted RBP30.49■■■□□ 2.47
CCM2-219ENST00000544363 LYSMD1Q96S90 227 aa30.49■■■□□ 2.47
CCM2-219ENST00000544363 P2RY13Q9BPV8 354 aa30.49■■■□□ 2.47
CCM2-219ENST00000544363 POLR3BQ9NW08 1133 aaPredicted RBP30.49■■■□□ 2.47
CCM2-219ENST00000544363 HCN2Q9UL51 889 aa30.49■■■□□ 2.47
CCM2-219ENST00000544363 STX7O15400 261 aaKnown RBP30.48■■■□□ 2.47
CCM2-219ENST00000544363 ITGA2BP08514 1039 aa30.48■■■□□ 2.47
CCM2-219ENST00000544363 KRT4P19013 534 aa30.48■■■□□ 2.47
CCM2-219ENST00000544363 SLC1A2P43004 574 aa30.48■■■□□ 2.47
CCM2-219ENST00000544363 POLR2LP62875 67 aaKnown RBP30.48■■■□□ 2.47
CCM2-219ENST00000544363 DNAJC3Q13217 504 aa30.48■■■□□ 2.47
CCM2-219ENST00000544363 CTBP1Q13363 440 aa30.48■■■□□ 2.47
CCM2-219ENST00000544363 UGP2Q16851 508 aa30.48■■■□□ 2.47
CCM2-219ENST00000544363 ZNF470Q6ECI4 717 aa30.48■■■□□ 2.47
CCM2-219ENST00000544363 TIFABQ6ZNK6 161 aa30.48■■■□□ 2.47
CCM2-219ENST00000544363 PTAR1Q7Z6K3 402 aaPredicted RBP30.48■■■□□ 2.47
CCM2-219ENST00000544363 C4orf33Q8N1A6 199 aa30.48■■■□□ 2.47
CCM2-219ENST00000544363 SLC44A3Q8N4M1 653 aa30.48■■■□□ 2.47
CCM2-219ENST00000544363 SCRN2Q96FV2 425 aa30.48■■■□□ 2.47
CCM2-219ENST00000544363 SERAC1Q96JX3 654 aa30.48■■■□□ 2.47
CCM2-219ENST00000544363 GUCD1Q96NT3 240 aa30.48■■■□□ 2.47
CCM2-219ENST00000544363 SUDS3Q9H7L9 328 aaPredicted RBP30.48■■■□□ 2.47
CCM2-219ENST00000544363 STARD13Q9Y3M8 1113 aa30.48■■■□□ 2.47
CCM2-219ENST00000544363 CCDC162PA2VCL2 907 aa30.47■■■□□ 2.47
CCM2-219ENST00000544363 GOT2P00505 430 aaKnown RBP30.47■■■□□ 2.47
CCM2-219ENST00000544363 HMGCLP35914 325 aa30.47■■■□□ 2.47
CCM2-219ENST00000544363 LIMK2P53671 638 aa30.47■■■□□ 2.47
CCM2-219ENST00000544363 CDKN3Q16667 212 aa30.47■■■□□ 2.47
CCM2-219ENST00000544363 C9orf64Q5T6V5 341 aa30.47■■■□□ 2.47
CCM2-219ENST00000544363 KIAA0408Q6ZU52 694 aa30.47■■■□□ 2.47
CCM2-219ENST00000544363 MICALCLQ6ZW33 695 aa30.47■■■□□ 2.47
CCM2-219ENST00000544363 USP45Q70EL2 814 aa30.47■■■□□ 2.47
CCM2-219ENST00000544363 MCCC1Q96RQ3 725 aaPredicted RBP30.47■■■□□ 2.47
CCM2-219ENST00000544363 ZFYVE1Q9HBF4 777 aa30.47■■■□□ 2.47
CCM2-219ENST00000544363 KCNK9Q9NPC2 374 aa30.47■■■□□ 2.47
CCM2-219ENST00000544363 IL17CQ9P0M4 197 aa30.47■■■□□ 2.47
CCM2-219ENST00000544363 FBXO5Q9UKT4 447 aa30.47■■■□□ 2.47
CCM2-219ENST00000544363 A0A0U1RQS6 177 aa30.47■■■□□ 2.47
CCM2-219ENST00000544363 TSPAN11A1L157 253 aa30.47■■■□□ 2.47
CCM2-219ENST00000544363 OR51F1A6NGY5 319 aa30.47■■■□□ 2.47
CCM2-219ENST00000544363 AHSGP02765 367 aa30.47■■■□□ 2.47
CCM2-219ENST00000544363 F7P08709 466 aaPredicted RBP30.47■■■□□ 2.47
CCM2-219ENST00000544363 TNFRSF4P43489 277 aa30.47■■■□□ 2.47
CCM2-219ENST00000544363 EGFLAMQ63HQ2 1017 aa30.47■■■□□ 2.47
CCM2-219ENST00000544363 HCAR2Q8TDS4 363 aa30.47■■■□□ 2.47
CCM2-219ENST00000544363 SSU72Q9NP77 194 aaKnown RBP30.47■■■□□ 2.47
CCM2-219ENST00000544363 PKP3Q9Y446 797 aa30.47■■■□□ 2.47
CCM2-219ENST00000544363 C1orf232A0A0U1RR37 186 aa30.46■■■□□ 2.47
CCM2-219ENST00000544363 TMEM120BA0PK00 339 aa30.46■■■□□ 2.47
CCM2-219ENST00000544363 RFPL1O75677 317 aa30.46■■■□□ 2.47
CCM2-219ENST00000544363 GABRB3P28472 473 aa30.46■■■□□ 2.47
CCM2-219ENST00000544363 HADHAP40939 763 aa30.46■■■□□ 2.47
CCM2-219ENST00000544363 IL12RB1P42701 662 aa30.46■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms