RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 CCNKO75909 580 aa19.41■□□□□ 0.7
SUDS3-204ENST00000543473 STAU1O95793 577 aaKnown RBP19.41■□□□□ 0.7
SUDS3-204ENST00000543473 GPX6P59796 221 aa19.41■□□□□ 0.7
SUDS3-204ENST00000543473 LCLAT1Q6UWP7 414 aa19.41■□□□□ 0.7
SUDS3-204ENST00000543473 OR2T12Q8NG77 320 aa19.41■□□□□ 0.7
SUDS3-204ENST00000543473 ITFG2Q969R8 447 aa19.41■□□□□ 0.7
SUDS3-204ENST00000543473 TRMT13Q9NUP7 481 aaKnown RBP19.41■□□□□ 0.7
SUDS3-204ENST00000543473 RAPGEFL1Q9UHV5 662 aa19.41■□□□□ 0.7
SUDS3-204ENST00000543473 SAMHD1Q9Y3Z3 626 aaKnown RBP19.41■□□□□ 0.7
SUDS3-204ENST00000543473 IGKV6D-41A0A0C4DH26 115 aa19.41■□□□□ 0.7
SUDS3-204ENST00000543473 CCDC182A6NF36 153 aa19.41■□□□□ 0.7
SUDS3-204ENST00000543473 ITGAXP20702 1163 aa19.41■□□□□ 0.7
SUDS3-204ENST00000543473 CDK9P50750 372 aaKnown RBP19.41■□□□□ 0.7
SUDS3-204ENST00000543473 THOP1P52888 689 aa19.41■□□□□ 0.7
SUDS3-204ENST00000543473 RPL38P63173 70 aaKnown RBP19.41■□□□□ 0.7
SUDS3-204ENST00000543473 NFE2Q16621 373 aaPredicted RBP19.41■□□□□ 0.7
SUDS3-204ENST00000543473 PDSS2Q86YH6 399 aa19.41■□□□□ 0.7
SUDS3-204ENST00000543473 SYT12Q8IV01 421 aa19.41■□□□□ 0.7
SUDS3-204ENST00000543473 SIX5Q8N196 739 aa19.41■□□□□ 0.7
SUDS3-204ENST00000543473 LRRC15Q8TF66 581 aa19.41■□□□□ 0.7
SUDS3-204ENST00000543473 QKIQ96PU8 341 aaKnown RBP eCLIP19.41■□□□□ 0.79e-9■□□□□ 10.7
SUDS3-204ENST00000543473 APOBEC3GQ9HC16 384 aaKnown RBP19.41■□□□□ 0.7
SUDS3-204ENST00000543473 RPRD1BQ9NQG5 326 aaKnown RBP19.41■□□□□ 0.7
SUDS3-204ENST00000543473 TCRBV7S3A2A0A539 114 aa19.41■□□□□ 0.7
SUDS3-204ENST00000543473 ASLP04424 464 aa19.41■□□□□ 0.7
SUDS3-204ENST00000543473 CYP4B1P13584 511 aa19.41■□□□□ 0.7
SUDS3-204ENST00000543473 CYP4F2P78329 520 aa19.41■□□□□ 0.7
SUDS3-204ENST00000543473 CYP4F3Q08477 520 aa19.41■□□□□ 0.7
SUDS3-204ENST00000543473 STRADAQ7RTN6 431 aa19.41■□□□□ 0.7
SUDS3-204ENST00000543473 TFAP2BQ92481 460 aa19.41■□□□□ 0.7
SUDS3-204ENST00000543473 C1orf21Q9H246 121 aa19.41■□□□□ 0.7
SUDS3-204ENST00000543473 MIEF1Q9NQG6 463 aa19.41■□□□□ 0.7
SUDS3-204ENST00000543473 PLK2Q9NYY3 685 aa19.41■□□□□ 0.7
SUDS3-204ENST00000543473 KLHL33A6NCF5 533 aa19.4■□□□□ 0.7
SUDS3-204ENST00000543473 GPIP06744 558 aa19.4■□□□□ 0.7
SUDS3-204ENST00000543473 THRBP10828 461 aa19.4■□□□□ 0.7
SUDS3-204ENST00000543473 CXCL17Q6UXB2 119 aa19.4■□□□□ 0.7
SUDS3-204ENST00000543473 SELENOMQ8WWX9 145 aa19.4■□□□□ 0.7
SUDS3-204ENST00000543473 WBP11Q9Y2W2 641 aaKnown RBP19.4■□□□□ 0.7
SUDS3-204ENST00000543473 USP2O75604 605 aaPredicted RBP19.4■□□□□ 0.7
SUDS3-204ENST00000543473 XRCC1P18887 633 aaPredicted RBP19.4■□□□□ 0.7
SUDS3-204ENST00000543473 ANXA11P50995 505 aaKnown RBP19.4■□□□□ 0.7
SUDS3-204ENST00000543473 CDC42P60953 191 aa19.4■□□□□ 0.7
SUDS3-204ENST00000543473 SFT2D3Q587I9 215 aa19.4■□□□□ 0.7
SUDS3-204ENST00000543473 CCNYL2Q5T2Q4 361 aa19.4■□□□□ 0.7
SUDS3-204ENST00000543473 HM13Q8TCT9 377 aa19.4■□□□□ 0.7
SUDS3-204ENST00000543473 HDAC10Q969S8 669 aa19.4■□□□□ 0.7
SUDS3-204ENST00000543473 MTFMTQ96DP5 389 aaKnown RBP19.4■□□□□ 0.7
SUDS3-204ENST00000543473 SLC15A5A6NIM6 579 aa19.4■□□□□ 0.7
SUDS3-204ENST00000543473 NFKBIEO00221 500 aa19.4■□□□□ 0.7
SUDS3-204ENST00000543473 PMM2O15305 246 aa19.4■□□□□ 0.7
SUDS3-204ENST00000543473 MFSD11O43934 449 aa19.4■□□□□ 0.7
SUDS3-204ENST00000543473 NTRK1P04629 796 aa19.4■□□□□ 0.7
SUDS3-204ENST00000543473 BDNFP23560 247 aa19.4■□□□□ 0.7
SUDS3-204ENST00000543473 PIK3CGP48736 1102 aa19.4■□□□□ 0.7
SUDS3-204ENST00000543473 LBX2Q6XYB7 198 aa19.4■□□□□ 0.7
SUDS3-204ENST00000543473 WDR36Q8NI36 951 aaKnown RBP19.4■□□□□ 0.7
SUDS3-204ENST00000543473 SH3BP1Q9Y3L3 701 aa19.4■□□□□ 0.7
SUDS3-204ENST00000543473 FFAR3O14843 346 aa19.4■□□□□ 0.7
SUDS3-204ENST00000543473 GPR42O15529 346 aa19.4■□□□□ 0.7
SUDS3-204ENST00000543473 ULK1O75385 1050 aa19.4■□□□□ 0.7
SUDS3-204ENST00000543473 CKMT2P17540 419 aa19.4■□□□□ 0.7
SUDS3-204ENST00000543473 SLC9B1Q4ZJI4 515 aa19.4■□□□□ 0.7
SUDS3-204ENST00000543473 TEX44Q53QW1 395 aa19.4■□□□□ 0.7
SUDS3-204ENST00000543473 MZT2BQ6NZ67 158 aa19.4■□□□□ 0.7
SUDS3-204ENST00000543473 EPHX4Q8IUS5 362 aa19.4■□□□□ 0.7
SUDS3-204ENST00000543473 PPM1MQ96MI6 270 aa19.4■□□□□ 0.7
SUDS3-204ENST00000543473 TMCC2O75069 709 aa19.39■□□□□ 0.7
SUDS3-204ENST00000543473 AOC1P19801 751 aa19.39■□□□□ 0.7
SUDS3-204ENST00000543473 ACSM2AQ08AH3 577 aa19.39■□□□□ 0.7
SUDS3-204ENST00000543473 ACSM2BQ68CK6 577 aa19.39■□□□□ 0.7
SUDS3-204ENST00000543473 DRAXINQ8NBI3 349 aaPredicted RBP19.39■□□□□ 0.7
SUDS3-204ENST00000543473 FAM126AQ9BYI3 521 aaPredicted RBP19.39■□□□□ 0.7
SUDS3-204ENST00000543473 PCDHAC1Q9H158 963 aa19.39■□□□□ 0.7
SUDS3-204ENST00000543473 DIABLOQ9NR28 239 aa19.39■□□□□ 0.7
SUDS3-204ENST00000543473 DKK3Q9UBP4 350 aa19.39■□□□□ 0.7
SUDS3-204ENST00000543473 UBA2Q9UBT2 640 aaPredicted RBP19.39■□□□□ 0.7
SUDS3-204ENST00000543473 ITM2AO43736 263 aa19.39■□□□□ 0.69
SUDS3-204ENST00000543473 B4GALT4O60513 344 aa19.39■□□□□ 0.69
SUDS3-204ENST00000543473 FGFR1P11362 822 aa19.39■□□□□ 0.69
SUDS3-204ENST00000543473 PTPRNQ16849 979 aa19.39■□□□□ 0.69
SUDS3-204ENST00000543473 SLC25A52Q3SY17 297 aa19.39■□□□□ 0.69
SUDS3-204ENST00000543473 MFSD4BQ5TF39 518 aa19.39■□□□□ 0.69
SUDS3-204ENST00000543473 RGMBQ6NW40 437 aa19.39■□□□□ 0.69
SUDS3-204ENST00000543473 FGD2Q7Z6J4 655 aa19.39■□□□□ 0.69
SUDS3-204ENST00000543473 CYP4Z2PQ8N1L4 340 aa19.39■□□□□ 0.69
SUDS3-204ENST00000543473 ATP13A1Q9HD20 1204 aa19.39■□□□□ 0.69
SUDS3-204ENST00000543473 ADGRE2Q9UHX3 823 aa19.39■□□□□ 0.69
SUDS3-204ENST00000543473 PEX10O60683 326 aa19.39■□□□□ 0.69
SUDS3-204ENST00000543473 CILPO75339 1184 aa19.39■□□□□ 0.69
SUDS3-204ENST00000543473 MTHFRP42898 656 aa19.39■□□□□ 0.69
SUDS3-204ENST00000543473 WSCD1Q658N2 575 aa19.39■□□□□ 0.69
SUDS3-204ENST00000543473 TAMM41Q96BW9 452 aa19.39■□□□□ 0.69
SUDS3-204ENST00000543473 SENP8Q96LD8 212 aa19.39■□□□□ 0.69
SUDS3-204ENST00000543473 MDM4O15151 490 aa19.39■□□□□ 0.69
SUDS3-204ENST00000543473 COX7A2P14406 83 aa19.39■□□□□ 0.69
SUDS3-204ENST00000543473 LIPEQ05469 1076 aa19.39■□□□□ 0.69
SUDS3-204ENST00000543473 SEMA5AQ13591 1074 aa19.39■□□□□ 0.69
SUDS3-204ENST00000543473 SLC47A1Q96FL8 570 aa19.39■□□□□ 0.69
SUDS3-204ENST00000543473 OLFM1Q99784 485 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms