RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 MLF2Q15773 248 aaPredicted RBP5.22□□□□□ -1.57
CLIP1-217ENST00000543205 MPPE1Q53F39 396 aa5.22□□□□□ -1.57
CLIP1-217ENST00000543205 LY6G5CQ5SRR4 150 aa5.22□□□□□ -1.57
CLIP1-217ENST00000543205 CFAP58Q5T655 872 aa5.22□□□□□ -1.57
CLIP1-217ENST00000543205 OTUD1Q5VV17 481 aaPredicted RBP5.22□□□□□ -1.57
CLIP1-217ENST00000543205 SCYL2Q6P3W7 929 aa5.22□□□□□ -1.57
CLIP1-217ENST00000543205 RHBDF2Q6PJF5 856 aa5.22□□□□□ -1.57
CLIP1-217ENST00000543205 SEZ6L2Q6UXD5 910 aa5.22□□□□□ -1.57
CLIP1-217ENST00000543205 RAD9BQ6WBX8 426 aa5.22□□□□□ -1.57
CLIP1-217ENST00000543205 ADAT2Q7Z6V5 191 aaKnown RBP5.22□□□□□ -1.57
CLIP1-217ENST00000543205 KIAA1328Q86T90 577 aa5.22□□□□□ -1.57
CLIP1-217ENST00000543205 LRRTM4Q86VH4 590 aa5.22□□□□□ -1.57
CLIP1-217ENST00000543205 FAM131BQ86XD5 332 aa5.22□□□□□ -1.57
CLIP1-217ENST00000543205 LRRC8AQ8IWT6 810 aa5.22□□□□□ -1.57
CLIP1-217ENST00000543205 TXLNBQ8N3L3 684 aa5.22□□□□□ -1.57
CLIP1-217ENST00000543205 ZNF564Q8TBZ8 553 aaPredicted RBP5.22□□□□□ -1.57
CLIP1-217ENST00000543205 FNIP1Q8TF40 1166 aa5.22□□□□□ -1.57
CLIP1-217ENST00000543205 DDI1Q8WTU0 396 aa5.22□□□□□ -1.57
CLIP1-217ENST00000543205 TMA16Q96EY4 203 aaKnown RBP5.22□□□□□ -1.57
CLIP1-217ENST00000543205 MVB12AQ96EY5 273 aa5.22□□□□□ -1.57
CLIP1-217ENST00000543205 MSANTD3Q96H12 275 aa5.22□□□□□ -1.57
CLIP1-217ENST00000543205 BBS2Q9BXC9 721 aa5.22□□□□□ -1.57
CLIP1-217ENST00000543205 TKTL2Q9H0I9 626 aa5.22□□□□□ -1.57
CLIP1-217ENST00000543205 MFSD1Q9H3U5 465 aa5.22□□□□□ -1.57
CLIP1-217ENST00000543205 ARHGEF3Q9NR81 526 aa5.22□□□□□ -1.57
CLIP1-217ENST00000543205 ARHGEF38Q9NXL2 777 aa5.22□□□□□ -1.57
CLIP1-217ENST00000543205 CALCOCO1Q9P1Z2 691 aa5.22□□□□□ -1.57
CLIP1-217ENST00000543205 UVRAGQ9P2Y5 699 aa5.22□□□□□ -1.57
CLIP1-217ENST00000543205 B4GALT6Q9UBX8 382 aa5.22□□□□□ -1.57
CLIP1-217ENST00000543205 LCMT1Q9UIC8 334 aa5.22□□□□□ -1.57
CLIP1-217ENST00000543205 ANAPC7Q9UJX3 599 aa5.22□□□□□ -1.57
CLIP1-217ENST00000543205 STOML2Q9UJZ1 356 aa5.22□□□□□ -1.57
CLIP1-217ENST00000543205 NUP210Q8TEM1 1887 aaPredicted RBP5.22□□□□□ -1.57
CLIP1-217ENST00000543205 XIRP2A4UGR9 3374 aa5.22□□□□□ -1.57
CLIP1-217ENST00000543205 PTPRZ1P23471 2315 aaPredicted RBP5.21□□□□□ -1.57
CLIP1-217ENST00000543205 OTOL1A6NHN0 477 aaPredicted RBP5.21□□□□□ -1.57
CLIP1-217ENST00000543205 PRR33A8MZF0 331 aa5.21□□□□□ -1.57
CLIP1-217ENST00000543205 NEDD8-MDP1E9PL57 170 aa5.21□□□□□ -1.57
CLIP1-217ENST00000543205 F5H5T6 163 aa5.21□□□□□ -1.57
CLIP1-217ENST00000543205 SPECC1L-ADORA2AF8WAN1 911 aa5.21□□□□□ -1.57
CLIP1-217ENST00000543205 TRDMT1O14717 391 aaKnown RBP5.21□□□□□ -1.57
CLIP1-217ENST00000543205 ARHGAP6O43182 974 aa5.21□□□□□ -1.57
CLIP1-217ENST00000543205 ENDOD1O94919 500 aa5.21□□□□□ -1.57
CLIP1-217ENST00000543205 OSMP13725 252 aa5.21□□□□□ -1.57
CLIP1-217ENST00000543205 HNRNPLP14866 589 aaKnown RBP eCLIP5.21□□□□□ -1.57
CLIP1-217ENST00000543205 TSHRP16473 764 aa5.21□□□□□ -1.57
CLIP1-217ENST00000543205 TACR2P21452 398 aa5.21□□□□□ -1.57
CLIP1-217ENST00000543205 GJA4P35212 333 aa5.21□□□□□ -1.57
CLIP1-217ENST00000543205 SSR1P43307 286 aaKnown RBP5.21□□□□□ -1.57
CLIP1-217ENST00000543205 NOP2P46087 812 aaKnown RBP5.21□□□□□ -1.57
CLIP1-217ENST00000543205 ITGA8P53708 1063 aa5.21□□□□□ -1.57
CLIP1-217ENST00000543205 NAP1L1P55209 391 aaKnown RBP5.21□□□□□ -1.57
CLIP1-217ENST00000543205 HDAC4P56524 1084 aa5.21□□□□□ -1.57
CLIP1-217ENST00000543205 OGDHQ02218 1023 aa5.21□□□□□ -1.57
CLIP1-217ENST00000543205 CYP4F3Q08477 520 aa5.21□□□□□ -1.57
CLIP1-217ENST00000543205 ACAP1Q15027 740 aa5.21□□□□□ -1.57
CLIP1-217ENST00000543205 RSPO4Q2I0M5 234 aaPredicted RBP5.21□□□□□ -1.57
CLIP1-217ENST00000543205 PREPLQ4J6C6 727 aaPredicted RBP5.21□□□□□ -1.57
CLIP1-217ENST00000543205 RAB6CQ53S08 254 aa5.21□□□□□ -1.57
CLIP1-217ENST00000543205 MS4A13Q5J8X5 152 aa5.21□□□□□ -1.57
CLIP1-217ENST00000543205 RABGAP1LQ5R372 815 aa5.21□□□□□ -1.57
CLIP1-217ENST00000543205 RAP1GAP2Q684P5 730 aa5.21□□□□□ -1.57
CLIP1-217ENST00000543205 NADSYN1Q6IA69 706 aa5.21□□□□□ -1.57
CLIP1-217ENST00000543205 RFWD3Q6PCD5 774 aa5.21□□□□□ -1.57
CLIP1-217ENST00000543205 LRRC31Q6UY01 552 aa5.21□□□□□ -1.57
CLIP1-217ENST00000543205 ZNF852Q6ZMS4 543 aa5.21□□□□□ -1.57
CLIP1-217ENST00000543205 TPRG1Q6ZUI0 275 aa5.21□□□□□ -1.57
CLIP1-217ENST00000543205 RFX8Q6ZV50 586 aa5.21□□□□□ -1.57
CLIP1-217ENST00000543205 USP53Q70EK8 1073 aa5.21□□□□□ -1.57
CLIP1-217ENST00000543205 BNIPLQ7Z465 357 aa5.21□□□□□ -1.57
CLIP1-217ENST00000543205 SLFN11Q7Z7L1 901 aa5.21□□□□□ -1.57
CLIP1-217ENST00000543205 RALGPS2Q86X27 583 aaPredicted RBP5.21□□□□□ -1.57
CLIP1-217ENST00000543205 CHSY1Q86X52 802 aa5.21□□□□□ -1.57
CLIP1-217ENST00000543205 TMEM25Q86YD3 366 aa5.21□□□□□ -1.57
CLIP1-217ENST00000543205 TMEM139Q8IV31 216 aa5.21□□□□□ -1.57
CLIP1-217ENST00000543205 CCDC117Q8IWD4 279 aaPredicted RBP5.21□□□□□ -1.57
CLIP1-217ENST00000543205 RHOT2Q8IXI1 618 aa5.21□□□□□ -1.57
CLIP1-217ENST00000543205 FAM217AQ8IXS0 508 aa5.21□□□□□ -1.57
CLIP1-217ENST00000543205 LGI2Q8N0V4 545 aa5.21□□□□□ -1.57
CLIP1-217ENST00000543205 CPXM2Q8N436 756 aa5.21□□□□□ -1.57
CLIP1-217ENST00000543205 LILRB1Q8NHL6 650 aaPredicted RBP5.21□□□□□ -1.57
CLIP1-217ENST00000543205 LRTOMTQ8WZ04 291 aa5.21□□□□□ -1.57
CLIP1-217ENST00000543205 FAM3CQ92520 227 aa5.21□□□□□ -1.57
CLIP1-217ENST00000543205 XPO6Q96QU8 1125 aaKnown RBP5.21□□□□□ -1.57
CLIP1-217ENST00000543205 HAPLN3Q96S86 360 aa5.21□□□□□ -1.57
CLIP1-217ENST00000543205 NCAPGQ9BPX3 1015 aa5.21□□□□□ -1.57
CLIP1-217ENST00000543205 GPATCH1Q9BRR8 931 aaKnown RBP5.21□□□□□ -1.57
CLIP1-217ENST00000543205 SIK2Q9H0K1 926 aa5.21□□□□□ -1.57
CLIP1-217ENST00000543205 RAB6CQ9H0N0 254 aa5.21□□□□□ -1.57
CLIP1-217ENST00000543205 C1GALT1Q9NS00 363 aa5.21□□□□□ -1.57
CLIP1-217ENST00000543205 OXSMQ9NWU1 459 aa5.21□□□□□ -1.57
CLIP1-217ENST00000543205 TBC1D29Q9UFV1 150 aa5.21□□□□□ -1.57
CLIP1-217ENST00000543205 XPO7Q9UIA9 1087 aaKnown RBP5.21□□□□□ -1.57
CLIP1-217ENST00000543205 MRPS17Q9Y2R5 130 aaKnown RBP5.21□□□□□ -1.57
CLIP1-217ENST00000543205 CACNA1GO43497 2377 aa5.21□□□□□ -1.58
CLIP1-217ENST00000543205 PGPEP1LA6NFU8 196 aa5.21□□□□□ -1.58
CLIP1-217ENST00000543205 TMEM221A6NGB7 291 aa5.21□□□□□ -1.58
CLIP1-217ENST00000543205 TMEM110-MUSTN1A8MSY1 372 aa5.21□□□□□ -1.58
CLIP1-217ENST00000543205 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.21□□□□□ -1.58
CLIP1-217ENST00000543205 M0R296 226 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms