RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 TBC1D3LB9A6J9 549 aa23.15■■□□□ 1.3
HOMER3-205ENST00000542541 DLL1O00548 723 aa23.15■■□□□ 1.3
HOMER3-205ENST00000542541 TBC1D3HP0C7X1 549 aa23.15■■□□□ 1.3
HOMER3-205ENST00000542541 TDGF1P13385 188 aa23.15■■□□□ 1.3
HOMER3-205ENST00000542541 MSLNQ13421 630 aaPredicted RBP23.15■■□□□ 1.3
HOMER3-205ENST00000542541 TAF1AQ15573 450 aaPredicted RBP23.15■■□□□ 1.3
HOMER3-205ENST00000542541 MAP7D1Q3KQU3 841 aa23.15■■□□□ 1.3
HOMER3-205ENST00000542541 TBC1D3GQ6DHY5 549 aa23.15■■□□□ 1.3
HOMER3-205ENST00000542541 TBC1D3CQ6IPX1 549 aa23.15■■□□□ 1.3
HOMER3-205ENST00000542541 CRTC1Q6UUV9 634 aa23.15■■□□□ 1.3
HOMER3-205ENST00000542541 ZDHHC24Q6UX98 284 aa23.15■■□□□ 1.3
HOMER3-205ENST00000542541 GLT6D1Q7Z4J2 308 aa23.15■■□□□ 1.3
HOMER3-205ENST00000542541 WDR5BQ86VZ2 330 aa23.15■■□□□ 1.3
HOMER3-205ENST00000542541 LONP2Q86WA8 852 aa23.15■■□□□ 1.3
HOMER3-205ENST00000542541 TBC1D3Q8IZP1 549 aaPredicted RBP23.15■■□□□ 1.3
HOMER3-205ENST00000542541 OR2T34Q8NGX1 318 aa23.15■■□□□ 1.3
HOMER3-205ENST00000542541 CXorf40AQ8TE69 158 aa23.15■■□□□ 1.3
HOMER3-205ENST00000542541 TOE1Q96GM8 510 aaKnown RBP23.15■■□□□ 1.3
HOMER3-205ENST00000542541 SMIM14Q96QK8 99 aa23.15■■□□□ 1.3
HOMER3-205ENST00000542541 TSPYL1Q9H0U9 437 aa23.15■■□□□ 1.3
HOMER3-205ENST00000542541 WSB2Q9NYS7 404 aaPredicted RBP23.15■■□□□ 1.3
HOMER3-205ENST00000542541 SPO11Q9Y5K1 396 aa23.15■■□□□ 1.3
HOMER3-205ENST00000542541 MAGEB16A2A368 324 aa23.15■■□□□ 1.3
HOMER3-205ENST00000542541 C2orf81A6NN90 581 aa23.15■■□□□ 1.3
HOMER3-205ENST00000542541 SPINT1O43278 529 aa23.15■■□□□ 1.3
HOMER3-205ENST00000542541 AVILO75366 819 aa23.15■■□□□ 1.3
HOMER3-205ENST00000542541 ADRA1DP25100 572 aa23.15■■□□□ 1.3
HOMER3-205ENST00000542541 ACSL1P33121 698 aa23.15■■□□□ 1.3
HOMER3-205ENST00000542541 MAGEA3P43357 314 aa23.15■■□□□ 1.3
HOMER3-205ENST00000542541 POU6F1Q14863 301 aa23.15■■□□□ 1.3
HOMER3-205ENST00000542541 ERCC6LQ2NKX8 1250 aa23.15■■□□□ 1.3
HOMER3-205ENST00000542541 ZNF528Q3MIS6 628 aa23.15■■□□□ 1.3
HOMER3-205ENST00000542541 PCID2Q5JVF3 399 aa23.15■■□□□ 1.3
HOMER3-205ENST00000542541 CERCAMQ5T4B2 595 aa23.15■■□□□ 1.3
HOMER3-205ENST00000542541 EIF1ADQ8N9N8 165 aaKnown RBP23.15■■□□□ 1.3
HOMER3-205ENST00000542541 RLN3Q8WXF3 142 aa23.15■■□□□ 1.3
HOMER3-205ENST00000542541 CD93Q9NPY3 652 aa23.15■■□□□ 1.3
HOMER3-205ENST00000542541 ZDHHC18Q9NUE0 388 aa23.15■■□□□ 1.3
HOMER3-205ENST00000542541 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP23.15■■□□□ 1.3
HOMER3-205ENST00000542541 ITM2BQ9Y287 266 aa23.15■■□□□ 1.3
HOMER3-205ENST00000542541 IGHV1OR15-9A0A0B4J2B8 117 aa23.14■■□□□ 1.29
HOMER3-205ENST00000542541 HEATR9A2RTY3 570 aa23.14■■□□□ 1.29
HOMER3-205ENST00000542541 PSMD11O00231 422 aa23.14■■□□□ 1.29
HOMER3-205ENST00000542541 SEMA4FO95754 770 aa23.14■■□□□ 1.29
HOMER3-205ENST00000542541 ELFN1P0C7U0 828 aa23.14■■□□□ 1.29
HOMER3-205ENST00000542541 FNTBP49356 437 aa23.14■■□□□ 1.29
HOMER3-205ENST00000542541 CARSP49589 748 aaKnown RBP23.14■■□□□ 1.29
HOMER3-205ENST00000542541 SEMG2Q02383 582 aa23.14■■□□□ 1.29
HOMER3-205ENST00000542541 RALGDSQ12967 914 aa23.14■■□□□ 1.29
HOMER3-205ENST00000542541 PTPRRQ15256 657 aa23.14■■□□□ 1.29
HOMER3-205ENST00000542541 LRRC66Q68CR7 880 aa23.14■■□□□ 1.29
HOMER3-205ENST00000542541 KIAA1161Q6NSJ0 714 aa23.14■■□□□ 1.29
HOMER3-205ENST00000542541 SLC36A4Q6YBV0 504 aa23.14■■□□□ 1.29
HOMER3-205ENST00000542541 CEP128Q6ZU80 1094 aa23.14■■□□□ 1.29
HOMER3-205ENST00000542541 CENPUQ71F23 418 aa23.14■■□□□ 1.29
HOMER3-205ENST00000542541 NLRP9Q7RTR0 991 aa23.14■■□□□ 1.29
HOMER3-205ENST00000542541 LYSMD3Q7Z3D4 306 aa23.14■■□□□ 1.29
HOMER3-205ENST00000542541 RAVER1Q8IY67 606 aaKnown RBP23.14■■□□□ 1.29
HOMER3-205ENST00000542541 PPHLN1Q8NEY8 458 aaKnown RBP23.14■■□□□ 1.29
HOMER3-205ENST00000542541 RANBP9Q96S59 729 aa23.14■■□□□ 1.29
HOMER3-205ENST00000542541 ANKZF1Q9H8Y5 726 aa23.14■■□□□ 1.29
HOMER3-205ENST00000542541 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.14■■□□□ 1.29
HOMER3-205ENST00000542541 V9GYY5 206 aaPredicted RBP23.14■■□□□ 1.29
HOMER3-205ENST00000542541 CACNA1IQ9P0X4 2223 aa23.13■■□□□ 1.29
HOMER3-205ENST00000542541 FAM47DPA6NHR8 397 aa23.13■■□□□ 1.29
HOMER3-205ENST00000542541 NDUFS2O75306 463 aa23.13■■□□□ 1.29
HOMER3-205ENST00000542541 CLDN7O95471 211 aa23.13■■□□□ 1.29
HOMER3-205ENST00000542541 LHCGRP22888 699 aa23.13■■□□□ 1.29
HOMER3-205ENST00000542541 MCM3P25205 808 aa23.13■■□□□ 1.29
HOMER3-205ENST00000542541 MGAT1P26572 445 aa23.13■■□□□ 1.29
HOMER3-205ENST00000542541 HMGCLP35914 325 aa23.13■■□□□ 1.29
HOMER3-205ENST00000542541 LIG3P49916 1009 aa23.13■■□□□ 1.29
HOMER3-205ENST00000542541 RPS21P63220 83 aaKnown RBP23.13■■□□□ 1.29
HOMER3-205ENST00000542541 DMWDQ09019 674 aa23.13■■□□□ 1.29
HOMER3-205ENST00000542541 CDKN3Q16667 212 aa23.13■■□□□ 1.29
HOMER3-205ENST00000542541 FNBP1LQ5T0N5 605 aa23.13■■□□□ 1.29
HOMER3-205ENST00000542541 DENND2CQ68D51 928 aa23.13■■□□□ 1.29
HOMER3-205ENST00000542541 LIPIQ6XZB0 460 aa23.13■■□□□ 1.29
HOMER3-205ENST00000542541 TMC3Q7Z5M5 1100 aa23.13■■□□□ 1.29
HOMER3-205ENST00000542541 TSPAN33Q86UF1 283 aa23.13■■□□□ 1.29
HOMER3-205ENST00000542541 GPR161Q8N6U8 529 aaKnown RBP23.13■■□□□ 1.29
HOMER3-205ENST00000542541 PTCD2Q8WV60 388 aaKnown RBP23.13■■□□□ 1.29
HOMER3-205ENST00000542541 LRRC39Q96DD0 335 aa23.13■■□□□ 1.29
HOMER3-205ENST00000542541 WRAP53Q9BUR4 548 aaKnown RBP23.13■■□□□ 1.29
HOMER3-205ENST00000542541 PHACTR1Q9C0D0 580 aa23.13■■□□□ 1.29
HOMER3-205ENST00000542541 SAMD15Q9P1V8 674 aa23.13■■□□□ 1.29
HOMER3-205ENST00000542541 GGT7Q9UJ14 662 aa23.13■■□□□ 1.29
HOMER3-205ENST00000542541 ZNF318Q5VUA4 2279 aa23.13■■□□□ 1.29
HOMER3-205ENST00000542541 EIF3HO15372 352 aaKnown RBP eCLIP23.12■■□□□ 1.29
HOMER3-205ENST00000542541 TUBBP07437 444 aa23.12■■□□□ 1.29
HOMER3-205ENST00000542541 LPOP22079 712 aaPredicted RBP23.12■■□□□ 1.29
HOMER3-205ENST00000542541 PTSQ03393 145 aa23.12■■□□□ 1.29
HOMER3-205ENST00000542541 CBLBQ13191 982 aa23.12■■□□□ 1.29
HOMER3-205ENST00000542541 MTM1Q13496 603 aa23.12■■□□□ 1.29
HOMER3-205ENST00000542541 SEPT6Q14141 434 aa23.12■■□□□ 1.29
HOMER3-205ENST00000542541 ANGPT1Q15389 498 aa23.12■■□□□ 1.29
HOMER3-205ENST00000542541 CNGA3Q16281 694 aa23.12■■□□□ 1.29
HOMER3-205ENST00000542541 BBS9Q3SYG4 887 aa23.12■■□□□ 1.29
HOMER3-205ENST00000542541 CASC4Q6P4E1 433 aa23.12■■□□□ 1.29
HOMER3-205ENST00000542541 C11orf74Q86VG3 221 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms