RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 LRRN4Q8WUT4 740 aa16.46■□□□□ 0.23
CCND1-205ENST00000542367 RAPGEF5Q92565 580 aa16.46■□□□□ 0.23
CCND1-205ENST00000542367 MAML1Q92585 1016 aa16.46■□□□□ 0.23
CCND1-205ENST00000542367 GLMNQ92990 594 aa16.46■□□□□ 0.23
CCND1-205ENST00000542367 FUBP1Q96AE4 644 aaKnown RBP16.46■□□□□ 0.23
CCND1-205ENST00000542367 FAF2Q96CS3 445 aa16.46■□□□□ 0.23
CCND1-205ENST00000542367 NXPE2Q96DL1 559 aa16.46■□□□□ 0.23
CCND1-205ENST00000542367 COQ10AQ96MF6 247 aa16.46■□□□□ 0.23
CCND1-205ENST00000542367 WDR92Q96MX6 357 aa16.46■□□□□ 0.23
CCND1-205ENST00000542367 SEMA3CQ99985 751 aa16.46■□□□□ 0.23
CCND1-205ENST00000542367 BOCQ9BWV1 1114 aa16.46■□□□□ 0.23
CCND1-205ENST00000542367 NRSN2Q9GZP1 204 aa16.46■□□□□ 0.23
CCND1-205ENST00000542367 KLQ9UEF7 1012 aa16.46■□□□□ 0.23
CCND1-205ENST00000542367 DOLKQ9UPQ8 538 aa16.46■□□□□ 0.23
CCND1-205ENST00000542367 LAMA5O15230 3695 aa16.46■□□□□ 0.22
CCND1-205ENST00000542367 EME2A4GXA9 379 aaPredicted RBP16.45■□□□□ 0.22
CCND1-205ENST00000542367 TMEM202A6NGA9 273 aa16.45■□□□□ 0.22
CCND1-205ENST00000542367 AKR1B15C9JRZ8 316 aaPredicted RBP16.45■□□□□ 0.22
CCND1-205ENST00000542367 CACNB4O00305 520 aaPredicted RBP16.45■□□□□ 0.22
CCND1-205ENST00000542367 HEXIM1O94992 359 aaKnown RBP16.45■□□□□ 0.22
CCND1-205ENST00000542367 PGLSO95336 258 aa16.45■□□□□ 0.22
CCND1-205ENST00000542367 TNFP01375 233 aa16.45■□□□□ 0.22
CCND1-205ENST00000542367 CYP2A6P11509 494 aaPredicted RBP16.45■□□□□ 0.22
CCND1-205ENST00000542367 NFKBIAP25963 317 aa16.45■□□□□ 0.22
CCND1-205ENST00000542367 TRIM23P36406 574 aa16.45■□□□□ 0.22
CCND1-205ENST00000542367 ARHGAP25P42331 645 aa16.45■□□□□ 0.22
CCND1-205ENST00000542367 RPIAP49247 311 aa16.45■□□□□ 0.22
CCND1-205ENST00000542367 GBE1Q04446 702 aa16.45■□□□□ 0.22
CCND1-205ENST00000542367 SLC10A2Q12908 348 aaPredicted RBP16.45■□□□□ 0.22
CCND1-205ENST00000542367 TBX2Q13207 712 aaPredicted RBP16.45■□□□□ 0.22
CCND1-205ENST00000542367 RTP5Q14D33 572 aa16.45■□□□□ 0.22
CCND1-205ENST00000542367 PTPRRQ15256 657 aa16.45■□□□□ 0.22
CCND1-205ENST00000542367 ARMC12Q5T9G4 340 aa16.45■□□□□ 0.22
CCND1-205ENST00000542367 CDCP2Q5VXM1 449 aa16.45■□□□□ 0.22
CCND1-205ENST00000542367 KCTD16Q68DU8 428 aa16.45■□□□□ 0.22
CCND1-205ENST00000542367 C19orf48Q6RUI8 117 aa16.45■□□□□ 0.22
CCND1-205ENST00000542367 CNGA4Q8IV77 575 aa16.45■□□□□ 0.22
CCND1-205ENST00000542367 RHOT2Q8IXI1 618 aa16.45■□□□□ 0.22
CCND1-205ENST00000542367 SLC35F3Q8IY50 421 aa16.45■□□□□ 0.22
CCND1-205ENST00000542367 FSTL5Q8N475 847 aaPredicted RBP16.45■□□□□ 0.22
CCND1-205ENST00000542367 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.45■□□□□ 0.22
CCND1-205ENST00000542367 MAPK15Q8TD08 544 aa16.45■□□□□ 0.22
CCND1-205ENST00000542367 SCRN2Q96FV2 425 aa16.45■□□□□ 0.22
CCND1-205ENST00000542367 TSGA13Q96PP4 275 aa16.45■□□□□ 0.22
CCND1-205ENST00000542367 RNF157Q96PX1 679 aa16.45■□□□□ 0.22
CCND1-205ENST00000542367 POLR1EQ9GZS1 481 aaKnown RBP16.45■□□□□ 0.22
CCND1-205ENST00000542367 RBM22Q9NW64 420 aaKnown RBP eCLIP16.45■□□□□ 0.22
CCND1-205ENST00000542367 GPSM3Q9Y4H4 160 aa16.45■□□□□ 0.22
CCND1-205ENST00000542367 RAI2Q9Y5P3 530 aa16.45■□□□□ 0.22
CCND1-205ENST00000542367 ASXL3Q9C0F0 2248 aa16.45■□□□□ 0.22
CCND1-205ENST00000542367 ACACAQ13085 2346 aa16.44■□□□□ 0.22
CCND1-205ENST00000542367 PDHA1P08559 390 aa16.44■□□□□ 0.22
CCND1-205ENST00000542367 HOXC4P09017 264 aaPredicted RBP16.44■□□□□ 0.22
CCND1-205ENST00000542367 ALPIP09923 528 aa16.44■□□□□ 0.22
CCND1-205ENST00000542367 CCNB1P14635 433 aa16.44■□□□□ 0.22
CCND1-205ENST00000542367 CTPS1P17812 591 aa16.44■□□□□ 0.22
CCND1-205ENST00000542367 MX2P20592 715 aa16.44■□□□□ 0.22
CCND1-205ENST00000542367 KIAA1024LP59773 190 aa16.44■□□□□ 0.22
CCND1-205ENST00000542367 ESRP1Q6NXG1 681 aaKnown RBP16.44■□□□□ 0.22
CCND1-205ENST00000542367 PNCKQ6P2M8 343 aa16.44■□□□□ 0.22
CCND1-205ENST00000542367 PELI3Q8N2H9 469 aa16.44■□□□□ 0.22
CCND1-205ENST00000542367 CBARPQ8N350 705 aaPredicted RBP16.44■□□□□ 0.22
CCND1-205ENST00000542367 OR56A4Q8NGH8 313 aa16.44■□□□□ 0.22
CCND1-205ENST00000542367 PIH1D2Q8WWB5 315 aa16.44■□□□□ 0.22
CCND1-205ENST00000542367 SCG3Q8WXD2 468 aaKnown RBP16.44■□□□□ 0.22
CCND1-205ENST00000542367 OR1E3Q8WZA6 343 aa16.44■□□□□ 0.22
CCND1-205ENST00000542367 FATE1Q969F0 183 aa16.44■□□□□ 0.22
CCND1-205ENST00000542367 NUS1Q96E22 293 aa16.44■□□□□ 0.22
CCND1-205ENST00000542367 PDXPQ96GD0 296 aa16.44■□□□□ 0.22
CCND1-205ENST00000542367 LGR4Q9BXB1 951 aa16.44■□□□□ 0.22
CCND1-205ENST00000542367 MRPL40Q9NQ50 206 aaKnown RBP16.44■□□□□ 0.22
CCND1-205ENST00000542367 DTLQ9NZJ0 730 aa16.44■□□□□ 0.22
CCND1-205ENST00000542367 PPIL1Q9Y3C6 166 aa16.44■□□□□ 0.22
CCND1-205ENST00000542367 TTLL3Q9Y4R7 772 aa16.44■□□□□ 0.22
CCND1-205ENST00000542367 DGKBQ9Y6T7 804 aa16.44■□□□□ 0.22
CCND1-205ENST00000542367 URB1O60287 2271 aaKnown RBP16.44■□□□□ 0.22
CCND1-205ENST00000542367 APC2O95996 2303 aa16.44■□□□□ 0.22
CCND1-205ENST00000542367 LRRD1A4D1F6 860 aa16.43■□□□□ 0.22
CCND1-205ENST00000542367 NPIPB15A6NHN6 443 aaPredicted RBP16.43■□□□□ 0.22
CCND1-205ENST00000542367 MTA2O94776 668 aa16.43■□□□□ 0.22
CCND1-205ENST00000542367 TGM2P21980 687 aa16.43■□□□□ 0.22
CCND1-205ENST00000542367 LHCGRP22888 699 aa16.43■□□□□ 0.22
CCND1-205ENST00000542367 CES1P23141 567 aa16.43■□□□□ 0.22
CCND1-205ENST00000542367 ETV3P41162 512 aa16.43■□□□□ 0.22
CCND1-205ENST00000542367 DSC2Q02487 901 aa16.43■□□□□ 0.22
CCND1-205ENST00000542367 ARHGEF7Q14155 803 aa16.43■□□□□ 0.22
CCND1-205ENST00000542367 IHHQ14623 411 aa16.43■□□□□ 0.22
CCND1-205ENST00000542367 PERM1Q5SV97 790 aa16.43■□□□□ 0.22
CCND1-205ENST00000542367 LVRNQ6Q4G3 990 aa16.43■□□□□ 0.22
CCND1-205ENST00000542367 SARM1Q6SZW1 724 aa16.43■□□□□ 0.22
CCND1-205ENST00000542367 CRTC1Q6UUV9 634 aa16.43■□□□□ 0.22
CCND1-205ENST00000542367 USP45Q70EL2 814 aa16.43■□□□□ 0.22
CCND1-205ENST00000542367 HSD11B1LQ7Z5J1 315 aa16.43■□□□□ 0.22
CCND1-205ENST00000542367 TSPAN33Q86UF1 283 aa16.43■□□□□ 0.22
CCND1-205ENST00000542367 GKN2Q86XP6 184 aa16.43■□□□□ 0.22
CCND1-205ENST00000542367 SDR16C5Q8N3Y7 309 aa16.43■□□□□ 0.22
CCND1-205ENST00000542367 CCNYQ8ND76 341 aa16.43■□□□□ 0.22
CCND1-205ENST00000542367 HNRNPLLQ8WVV9 542 aaKnown RBP16.43■□□□□ 0.22
CCND1-205ENST00000542367 DEPDC7Q96QD5 511 aa16.43■□□□□ 0.22
CCND1-205ENST00000542367 MCCC1Q96RQ3 725 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms