RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 C2orf81A6NN90 581 aa11.05□□□□□ -0.64
SCG3-202ENST00000542355 TRAFD1O14545 582 aaPredicted RBP11.05□□□□□ -0.64
SCG3-202ENST00000542355 PGLSO95336 258 aa11.05□□□□□ -0.64
SCG3-202ENST00000542355 ADH1CP00326 375 aa11.05□□□□□ -0.64
SCG3-202ENST00000542355 GOT2P00505 430 aaKnown RBP11.05□□□□□ -0.64
SCG3-202ENST00000542355 CTPS1P17812 591 aa11.05□□□□□ -0.64
SCG3-202ENST00000542355 DRD4P21917 467 aa11.05□□□□□ -0.64
SCG3-202ENST00000542355 SP100P23497 879 aaPredicted RBP11.05□□□□□ -0.64
SCG3-202ENST00000542355 GMPRP36959 345 aa11.05□□□□□ -0.64
SCG3-202ENST00000542355 ETV4P43268 484 aa11.05□□□□□ -0.64
SCG3-202ENST00000542355 MAPK8P45983 427 aa11.05□□□□□ -0.64
SCG3-202ENST00000542355 CSNK1DP48730 415 aa11.05□□□□□ -0.64
SCG3-202ENST00000542355 DGKGP49619 791 aa11.05□□□□□ -0.64
SCG3-202ENST00000542355 ACVR1Q04771 509 aa11.05□□□□□ -0.64
SCG3-202ENST00000542355 SF3A3Q12874 501 aaKnown RBP eCLIP11.05□□□□□ -0.64
SCG3-202ENST00000542355 FOXD4Q12950 439 aaPredicted RBP11.05□□□□□ -0.64
SCG3-202ENST00000542355 DMC1Q14565 340 aa11.05□□□□□ -0.64
SCG3-202ENST00000542355 TAF1AQ15573 450 aaPredicted RBP11.05□□□□□ -0.64
SCG3-202ENST00000542355 DLG2Q15700 870 aa11.05□□□□□ -0.64
SCG3-202ENST00000542355 ZSCAN26Q16670 478 aa11.05□□□□□ -0.64
SCG3-202ENST00000542355 ZNF789Q5FWF6 425 aa11.05□□□□□ -0.64
SCG3-202ENST00000542355 TANGO2Q6ICL3 276 aa11.05□□□□□ -0.64
SCG3-202ENST00000542355 EP400NLQ6ZTU2 488 aa11.05□□□□□ -0.64
SCG3-202ENST00000542355 LDB1Q86U70 411 aaPredicted RBP11.05□□□□□ -0.64
SCG3-202ENST00000542355 C12orf40Q86WS4 652 aa11.05□□□□□ -0.64
SCG3-202ENST00000542355 GABPB2Q8TAK5 448 aaPredicted RBP11.05□□□□□ -0.64
SCG3-202ENST00000542355 CYB5D2Q8WUJ1 264 aa11.05□□□□□ -0.64
SCG3-202ENST00000542355 CDKN2AIPNLQ96HQ2 116 aa11.05□□□□□ -0.64
SCG3-202ENST00000542355 MFSD1Q9H3U5 465 aa11.05□□□□□ -0.64
SCG3-202ENST00000542355 ZNF576Q9H609 170 aa11.05□□□□□ -0.64
SCG3-202ENST00000542355 ATP13A3Q9H7F0 1226 aa11.05□□□□□ -0.64
SCG3-202ENST00000542355 CCDC162PA2VCL2 907 aa11.04□□□□□ -0.64
SCG3-202ENST00000542355 OTOL1A6NHN0 477 aaPredicted RBP11.04□□□□□ -0.64
SCG3-202ENST00000542355 RPP40O75818 363 aaKnown RBP11.04□□□□□ -0.64
SCG3-202ENST00000542355 ALPIP09923 528 aa11.04□□□□□ -0.64
SCG3-202ENST00000542355 TAC1P20366 129 aa11.04□□□□□ -0.64
SCG3-202ENST00000542355 CD151P48509 253 aa11.04□□□□□ -0.64
SCG3-202ENST00000542355 SERPINB8P50452 374 aa11.04□□□□□ -0.64
SCG3-202ENST00000542355 PGGT1BP53609 377 aa11.04□□□□□ -0.64
SCG3-202ENST00000542355 USP10Q14694 798 aaKnown RBP11.04□□□□□ -0.64
SCG3-202ENST00000542355 PDK4Q16654 411 aa11.04□□□□□ -0.64
SCG3-202ENST00000542355 MYLK3Q32MK0 819 aa11.04□□□□□ -0.64
SCG3-202ENST00000542355 ATAT1Q5SQI0 421 aa11.04□□□□□ -0.64
SCG3-202ENST00000542355 C16orf46Q6P387 395 aa11.04□□□□□ -0.64
SCG3-202ENST00000542355 C22orf39Q6P5X5 142 aa11.04□□□□□ -0.64
SCG3-202ENST00000542355 FOXR1Q6PIV2 292 aa11.04□□□□□ -0.64
SCG3-202ENST00000542355 CNSTQ6PJW8 725 aa11.04□□□□□ -0.64
SCG3-202ENST00000542355 DPY19L3Q6ZPD9 716 aa11.04□□□□□ -0.64
SCG3-202ENST00000542355 KIAA0907Q7Z7F0 614 aaPredicted RBP11.04□□□□□ -0.64
SCG3-202ENST00000542355 CILP2Q8IUL8 1156 aa11.04□□□□□ -0.64
SCG3-202ENST00000542355 KIAA1958Q8N8K9 716 aa11.04□□□□□ -0.64
SCG3-202ENST00000542355 ARMC2Q8NEN0 867 aa11.04□□□□□ -0.64
SCG3-202ENST00000542355 PIH1D2Q8WWB5 315 aa11.04□□□□□ -0.64
SCG3-202ENST00000542355 ISG20Q96AZ6 181 aaKnown RBP11.04□□□□□ -0.64
SCG3-202ENST00000542355 MYO19Q96H55 970 aa11.04□□□□□ -0.64
SCG3-202ENST00000542355 GPR22Q99680 433 aa11.04□□□□□ -0.64
SCG3-202ENST00000542355 CIPCQ9C0C6 399 aa11.04□□□□□ -0.64
SCG3-202ENST00000542355 ZFP14Q9HCL3 533 aa11.04□□□□□ -0.64
SCG3-202ENST00000542355 BPIFA1Q9NP55 256 aa11.04□□□□□ -0.64
SCG3-202ENST00000542355 NLE1Q9NVX2 485 aaPredicted RBP11.04□□□□□ -0.64
SCG3-202ENST00000542355 MKS1Q9NXB0 559 aa11.04□□□□□ -0.64
SCG3-202ENST00000542355 MARCH4Q9P2E8 410 aaPredicted RBP11.04□□□□□ -0.64
SCG3-202ENST00000542355 DCDC2Q9UHG0 476 aa11.04□□□□□ -0.64
SCG3-202ENST00000542355 FBXO10Q9UK96 956 aa11.04□□□□□ -0.64
SCG3-202ENST00000542355 CDH7Q9ULB5 785 aa11.04□□□□□ -0.64
SCG3-202ENST00000542355 ERVW-1Q9UQF0 538 aa11.04□□□□□ -0.64
SCG3-202ENST00000542355 BPTFQ12830 3046 aa11.04□□□□□ -0.64
SCG3-202ENST00000542355 C5orf42Q9H799 3197 aa11.04□□□□□ -0.64
SCG3-202ENST00000542355 A0A096LPK6 155 aa11.04□□□□□ -0.64
SCG3-202ENST00000542355 HOXC11O43248 304 aaPredicted RBP11.04□□□□□ -0.64
SCG3-202ENST00000542355 HTRA2O43464 458 aaPredicted RBP11.04□□□□□ -0.64
SCG3-202ENST00000542355 NFATC1O95644 943 aa11.04□□□□□ -0.64
SCG3-202ENST00000542355 C2P06681 752 aa11.04□□□□□ -0.64
SCG3-202ENST00000542355 CISD3P0C7P0 127 aa11.04□□□□□ -0.64
SCG3-202ENST00000542355 NEFHP12036 1026 aa11.04□□□□□ -0.64
SCG3-202ENST00000542355 HOXB8P17481 243 aaPredicted RBP11.04□□□□□ -0.64
SCG3-202ENST00000542355 LPOP22079 712 aaPredicted RBP11.04□□□□□ -0.64
SCG3-202ENST00000542355 SERPINA4P29622 427 aa11.04□□□□□ -0.64
SCG3-202ENST00000542355 GRIA4P48058 902 aa11.04□□□□□ -0.64
SCG3-202ENST00000542355 ZNF140P52738 457 aaPredicted RBP11.04□□□□□ -0.64
SCG3-202ENST00000542355 IRX4P78413 519 aa11.04□□□□□ -0.64
SCG3-202ENST00000542355 DLX2Q07687 328 aaPredicted RBP11.04□□□□□ -0.64
SCG3-202ENST00000542355 ADAM15Q13444 863 aa11.04□□□□□ -0.64
SCG3-202ENST00000542355 ZKSCAN8Q15776 578 aaPredicted RBP11.04□□□□□ -0.64
SCG3-202ENST00000542355 CARD16Q5EG05 197 aa11.04□□□□□ -0.64
SCG3-202ENST00000542355 KIAA0408Q6ZU52 694 aa11.04□□□□□ -0.64
SCG3-202ENST00000542355 Q6ZVU0 165 aa11.04□□□□□ -0.64
SCG3-202ENST00000542355 RAPH1Q70E73 1250 aa11.04□□□□□ -0.64
SCG3-202ENST00000542355 SLC41A1Q8IVJ1 513 aa11.04□□□□□ -0.64
SCG3-202ENST00000542355 MFSD6LQ8IWD5 586 aa11.04□□□□□ -0.64
SCG3-202ENST00000542355 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.04□□□□□ -0.64
SCG3-202ENST00000542355 OR4L1Q8NH43 312 aa11.04□□□□□ -0.64
SCG3-202ENST00000542355 LRRC8CQ8TDW0 803 aa11.04□□□□□ -0.64
SCG3-202ENST00000542355 ISL2Q96A47 359 aa11.04□□□□□ -0.64
SCG3-202ENST00000542355 FAM83CQ9BQN1 747 aa11.04□□□□□ -0.64
SCG3-202ENST00000542355 FGFR1OP2Q9NVK5 253 aa11.04□□□□□ -0.64
SCG3-202ENST00000542355 THG1LQ9NWX6 298 aaKnown RBP11.04□□□□□ -0.64
SCG3-202ENST00000542355 CLEC1BQ9P126 229 aa11.04□□□□□ -0.64
SCG3-202ENST00000542355 RIMKLBQ9ULI2 386 aa11.04□□□□□ -0.64
SCG3-202ENST00000542355 FAM95CA0A1B0GW59 222 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms