RNA–Protein interactions for RNA: ENST00000542040.1

TRPT1-212, Transcript of tRNA phosphotransferase 1, humanhuman

TSL 2

Gene TRPT1, Length 914 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-212ENST00000542040 EIF2S3P41091 472 aaKnown RBP17.5■□□□□ 0.39
TRPT1-212ENST00000542040 ARHGAP25P42331 645 aa17.5■□□□□ 0.39
TRPT1-212ENST00000542040 LSSP48449 732 aa17.5■□□□□ 0.39
TRPT1-212ENST00000542040 CLDN6P56747 220 aa17.5■□□□□ 0.39
TRPT1-212ENST00000542040 ERVPABLB-1P60509 514 aa17.5■□□□□ 0.39
TRPT1-212ENST00000542040 SPIDRQ14159 915 aa17.5■□□□□ 0.39
TRPT1-212ENST00000542040 PAFAH1B3Q15102 231 aaKnown RBP17.5■□□□□ 0.39
TRPT1-212ENST00000542040 ALG11Q2TAA5 492 aa17.5■□□□□ 0.39
TRPT1-212ENST00000542040 TBC1D25Q3MII6 688 aa17.5■□□□□ 0.39
TRPT1-212ENST00000542040 GUSBP11Q6P575 273 aa17.5■□□□□ 0.39
TRPT1-212ENST00000542040 TAF8Q7Z7C8 310 aa17.5■□□□□ 0.39
TRPT1-212ENST00000542040 PDZD3Q86UT5 571 aa17.5■□□□□ 0.39
TRPT1-212ENST00000542040 ZNF248Q8NDW4 579 aa17.5■□□□□ 0.39
TRPT1-212ENST00000542040 SNIP1Q8TAD8 396 aaKnown RBP17.5■□□□□ 0.39
TRPT1-212ENST00000542040 FAM71BQ8TC56 605 aa17.5■□□□□ 0.39
TRPT1-212ENST00000542040 KIAA1524Q8TCG1 905 aa17.5■□□□□ 0.39
TRPT1-212ENST00000542040 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.5■□□□□ 0.39
TRPT1-212ENST00000542040 FATE1Q969F0 183 aa17.5■□□□□ 0.39
TRPT1-212ENST00000542040 SCRN2Q96FV2 425 aa17.5■□□□□ 0.39
TRPT1-212ENST00000542040 POLR1BQ9H9Y6 1135 aa17.5■□□□□ 0.39
TRPT1-212ENST00000542040 NOD2Q9HC29 1040 aa17.5■□□□□ 0.39
TRPT1-212ENST00000542040 NT5MQ9NPB1 228 aa17.5■□□□□ 0.39
TRPT1-212ENST00000542040 THSD1Q9NS62 852 aa17.5■□□□□ 0.39
TRPT1-212ENST00000542040 B4GALT6Q9UBX8 382 aa17.5■□□□□ 0.39
TRPT1-212ENST00000542040 FRYQ5TBA9 3013 aa17.5■□□□□ 0.39
TRPT1-212ENST00000542040 MATN3O15232 486 aa17.49■□□□□ 0.39
TRPT1-212ENST00000542040 PRKCGP05129 697 aa17.49■□□□□ 0.39
TRPT1-212ENST00000542040 ZFXP17010 805 aaPredicted RBP17.49■□□□□ 0.39
TRPT1-212ENST00000542040 CR2P20023 1033 aa17.49■□□□□ 0.39
TRPT1-212ENST00000542040 GJC1P36383 396 aa17.49■□□□□ 0.39
TRPT1-212ENST00000542040 GARSP41250 739 aaKnown RBP17.49■□□□□ 0.39
TRPT1-212ENST00000542040 PCBP4P57723 403 aaKnown RBP17.49■□□□□ 0.39
TRPT1-212ENST00000542040 GABREP78334 506 aa17.49■□□□□ 0.39
TRPT1-212ENST00000542040 RALGDSQ12967 914 aa17.49■□□□□ 0.39
TRPT1-212ENST00000542040 ISXQ2M1V0 245 aa17.49■□□□□ 0.39
TRPT1-212ENST00000542040 ANKRD20A8PQ5CZ79 823 aa17.49■□□□□ 0.39
TRPT1-212ENST00000542040 TPRG1LQ5T0D9 272 aa17.49■□□□□ 0.39
TRPT1-212ENST00000542040 ZSWIM9Q86XI8 627 aa17.49■□□□□ 0.39
TRPT1-212ENST00000542040 CNGA4Q8IV77 575 aa17.49■□□□□ 0.39
TRPT1-212ENST00000542040 RHOT2Q8IXI1 618 aa17.49■□□□□ 0.39
TRPT1-212ENST00000542040 RAVER1Q8IY67 606 aaKnown RBP17.49■□□□□ 0.39
TRPT1-212ENST00000542040 ARL14Q8N4G2 192 aa17.49■□□□□ 0.39
TRPT1-212ENST00000542040 TEX26Q8N6G2 289 aa17.49■□□□□ 0.39
TRPT1-212ENST00000542040 RBM15Q96T37 977 aaKnown RBP eCLIP17.49■□□□□ 0.39
TRPT1-212ENST00000542040 DNAJC7Q99615 494 aa17.49■□□□□ 0.39
TRPT1-212ENST00000542040 STRADBQ9C0K7 418 aa17.49■□□□□ 0.39
TRPT1-212ENST00000542040 ETNK2Q9NVF9 386 aa17.49■□□□□ 0.39
TRPT1-212ENST00000542040 LY6G6EA0A0G2JKS1 128 aa17.48■□□□□ 0.39
TRPT1-212ENST00000542040 GOLGA6CA6NDK9 693 aa17.48■□□□□ 0.39
TRPT1-212ENST00000542040 GOLGA6BA6NDN3 693 aa17.48■□□□□ 0.39
TRPT1-212ENST00000542040 A8MX80 341 aa17.48■□□□□ 0.39
TRPT1-212ENST00000542040 HEXIM1O94992 359 aaKnown RBP17.48■□□□□ 0.39
TRPT1-212ENST00000542040 PGLSO95336 258 aa17.48■□□□□ 0.39
TRPT1-212ENST00000542040 GOLGA6DP0CG33 693 aa17.48■□□□□ 0.39
TRPT1-212ENST00000542040 MYCLP1P12525 358 aaPredicted RBP17.48■□□□□ 0.39
TRPT1-212ENST00000542040 MYF5P13349 255 aa17.48■□□□□ 0.39
TRPT1-212ENST00000542040 TCF4P15884 667 aa17.48■□□□□ 0.39
TRPT1-212ENST00000542040 ZNF30P17039 623 aa17.48■□□□□ 0.39
TRPT1-212ENST00000542040 TEAD1P28347 426 aa17.48■□□□□ 0.39
TRPT1-212ENST00000542040 MLLT3P42568 568 aaPredicted RBP17.48■□□□□ 0.39
TRPT1-212ENST00000542040 UCNP55089 124 aa17.48■□□□□ 0.39
TRPT1-212ENST00000542040 GALNT2Q10471 571 aa17.48■□□□□ 0.39
TRPT1-212ENST00000542040 BIRC2Q13490 618 aa17.48■□□□□ 0.39
TRPT1-212ENST00000542040 DPYSL3Q14195 570 aa17.48■□□□□ 0.39
TRPT1-212ENST00000542040 DENND2CQ68D51 928 aa17.48■□□□□ 0.39
TRPT1-212ENST00000542040 SLC35F3Q8IY50 421 aa17.48■□□□□ 0.39
TRPT1-212ENST00000542040 CCNYQ8ND76 341 aa17.48■□□□□ 0.39
TRPT1-212ENST00000542040 FAM46DQ8NEK8 389 aa17.48■□□□□ 0.39
TRPT1-212ENST00000542040 FUBP1Q96AE4 644 aaKnown RBP17.48■□□□□ 0.39
TRPT1-212ENST00000542040 TSGA13Q96PP4 275 aa17.48■□□□□ 0.39
TRPT1-212ENST00000542040 SEMA3CQ99985 751 aa17.48■□□□□ 0.39
TRPT1-212ENST00000542040 CCDC3Q9BQI4 270 aa17.48■□□□□ 0.39
TRPT1-212ENST00000542040 CLPBQ9H078 707 aa17.48■□□□□ 0.39
TRPT1-212ENST00000542040 TCEAL2Q9H3H9 227 aaPredicted RBP17.48■□□□□ 0.39
TRPT1-212ENST00000542040 SYNDIG1Q9H7V2 258 aa17.48■□□□□ 0.39
TRPT1-212ENST00000542040 RBM22Q9NW64 420 aaKnown RBP eCLIP17.48■□□□□ 0.39
TRPT1-212ENST00000542040 GOLGA6AQ9NYA3 693 aa17.48■□□□□ 0.39
TRPT1-212ENST00000542040 RAI2Q9Y5P3 530 aa17.48■□□□□ 0.39
TRPT1-212ENST00000542040 U3KQA8 63 aa17.48■□□□□ 0.39
TRPT1-212ENST00000542040 DXOO77932 396 aaKnown RBP17.47■□□□□ 0.39
TRPT1-212ENST00000542040 PEX11BO96011 259 aa17.47■□□□□ 0.39
TRPT1-212ENST00000542040 CCNB1P14635 433 aa17.47■□□□□ 0.39
TRPT1-212ENST00000542040 PNLIPP16233 465 aa17.47■□□□□ 0.39
TRPT1-212ENST00000542040 TGM2P21980 687 aa17.47■□□□□ 0.39
TRPT1-212ENST00000542040 MAXP61244 160 aa17.47■□□□□ 0.39
TRPT1-212ENST00000542040 RPL26P61254 145 aaKnown RBP17.47■□□□□ 0.39
TRPT1-212ENST00000542040 ILF3Q12906 894 aaKnown RBP eCLIP17.47■□□□□ 0.39
TRPT1-212ENST00000542040 EIF3IQ13347 325 aaKnown RBP17.47■□□□□ 0.39
TRPT1-212ENST00000542040 TXNRD3NBQ6F5E7 133 aa17.47■□□□□ 0.39
TRPT1-212ENST00000542040 BZW1Q7L1Q6 419 aaKnown RBP17.47■□□□□ 0.39
TRPT1-212ENST00000542040 VSIG1Q86XK7 387 aa17.47■□□□□ 0.39
TRPT1-212ENST00000542040 PCDH19Q8TAB3 1148 aa17.47■□□□□ 0.39
TRPT1-212ENST00000542040 COQ10AQ96MF6 247 aa17.47■□□□□ 0.39
TRPT1-212ENST00000542040 TMEM74Q96NL1 305 aa17.47■□□□□ 0.39
TRPT1-212ENST00000542040 GFM1Q96RP9 751 aaKnown RBP17.47■□□□□ 0.39
TRPT1-212ENST00000542040 LGMNQ99538 433 aa17.47■□□□□ 0.39
TRPT1-212ENST00000542040 GSDMCQ9BYG8 508 aa17.47■□□□□ 0.39
TRPT1-212ENST00000542040 DPEP2Q9H4A9 486 aa17.47■□□□□ 0.39
TRPT1-212ENST00000542040 CYP4F12Q9HCS2 524 aa17.47■□□□□ 0.39
TRPT1-212ENST00000542040 LUC7LQ9NQ29 371 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms