RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 EPHA8P29322 1005 aaPredicted RBP9.76□□□□□ -0.85
YBX3-212ENST00000542002 PTPN7P35236 360 aa9.76□□□□□ -0.85
YBX3-212ENST00000542002 ETV3P41162 512 aa9.76□□□□□ -0.85
YBX3-212ENST00000542002 RABIFP47224 123 aa9.76□□□□□ -0.85
YBX3-212ENST00000542002 COPS2P61201 443 aa9.76□□□□□ -0.85
YBX3-212ENST00000542002 OTUD4Q01804 1114 aaKnown RBP9.76□□□□□ -0.85
YBX3-212ENST00000542002 PDE1CQ14123 709 aaPredicted RBP9.76□□□□□ -0.85
YBX3-212ENST00000542002 LRRC14Q15048 493 aa9.76□□□□□ -0.85
YBX3-212ENST00000542002 TRIP6Q15654 476 aaKnown RBP9.76□□□□□ -0.85
YBX3-212ENST00000542002 CRTC1Q6UUV9 634 aa9.76□□□□□ -0.85
YBX3-212ENST00000542002 KDELC2Q7Z4H8 507 aa9.76□□□□□ -0.85
YBX3-212ENST00000542002 PTAR1Q7Z6K3 402 aaPredicted RBP9.76□□□□□ -0.85
YBX3-212ENST00000542002 SLCO6A1Q86UG4 719 aa9.76□□□□□ -0.85
YBX3-212ENST00000542002 ZSCAN30Q86W11 494 aa9.76□□□□□ -0.85
YBX3-212ENST00000542002 ZNF567Q8N184 647 aa9.76□□□□□ -0.85
YBX3-212ENST00000542002 ACTL9Q8TC94 416 aa9.76□□□□□ -0.85
YBX3-212ENST00000542002 RHBDD1Q8TEB9 315 aa9.76□□□□□ -0.85
YBX3-212ENST00000542002 TFB1MQ8WVM0 346 aaKnown RBP9.76□□□□□ -0.85
YBX3-212ENST00000542002 EID2BQ96D98 161 aa9.76□□□□□ -0.85
YBX3-212ENST00000542002 ZNF830Q96NB3 372 aaPredicted RBP9.76□□□□□ -0.85
YBX3-212ENST00000542002 TRIB3Q96RU7 358 aa9.76□□□□□ -0.85
YBX3-212ENST00000542002 LGR4Q9BXB1 951 aa9.76□□□□□ -0.85
YBX3-212ENST00000542002 TDRD1Q9BXT4 1180 aaKnown RBP9.76□□□□□ -0.85
YBX3-212ENST00000542002 SLC25A51Q9H1U9 297 aa9.76□□□□□ -0.85
YBX3-212ENST00000542002 TCEAL2Q9H3H9 227 aaPredicted RBP9.76□□□□□ -0.85
YBX3-212ENST00000542002 GLOD4Q9HC38 313 aa9.76□□□□□ -0.85
YBX3-212ENST00000542002 TOR4AQ9NXH8 423 aa9.76□□□□□ -0.85
YBX3-212ENST00000542002 UBP1Q9NZI7 540 aa9.76□□□□□ -0.85
YBX3-212ENST00000542002 EFR3BQ9Y2G0 817 aa9.76□□□□□ -0.85
YBX3-212ENST00000542002 OR1A2Q9Y585 309 aa9.76□□□□□ -0.85
YBX3-212ENST00000542002 CACNA1EQ15878 2313 aa9.76□□□□□ -0.85
YBX3-212ENST00000542002 ASCC3Q8N3C0 2202 aaKnown RBP9.75□□□□□ -0.85
YBX3-212ENST00000542002 KNL1Q8NG31 2342 aa9.75□□□□□ -0.85
YBX3-212ENST00000542002 A0A0J9YYE9 177 aa9.75□□□□□ -0.85
YBX3-212ENST00000542002 A0A1W2PQ67 120 aa9.75□□□□□ -0.85
YBX3-212ENST00000542002 F5H423 210 aaPredicted RBP9.75□□□□□ -0.85
YBX3-212ENST00000542002 APOC4-APOC2K7ER74 178 aa9.75□□□□□ -0.85
YBX3-212ENST00000542002 TRIM38O00635 465 aa9.75□□□□□ -0.85
YBX3-212ENST00000542002 MAGEC1O60732 1142 aa9.75□□□□□ -0.85
YBX3-212ENST00000542002 CLDN7O95471 211 aa9.75□□□□□ -0.85
YBX3-212ENST00000542002 TRBC1P01850 177 aa9.75□□□□□ -0.85
YBX3-212ENST00000542002 APOC2P02655 101 aa9.75□□□□□ -0.85
YBX3-212ENST00000542002 FUCA1P04066 466 aa9.75□□□□□ -0.85
YBX3-212ENST00000542002 CSF2P04141 144 aa9.75□□□□□ -0.85
YBX3-212ENST00000542002 PCCBP05166 539 aa9.75□□□□□ -0.85
YBX3-212ENST00000542002 ITGAVP06756 1048 aa9.75□□□□□ -0.85
YBX3-212ENST00000542002 ADRB1P08588 477 aa9.75□□□□□ -0.85
YBX3-212ENST00000542002 ATXN1LP0C7T5 689 aaKnown RBP9.75□□□□□ -0.85
YBX3-212ENST00000542002 ELFN1P0C7U0 828 aa9.75□□□□□ -0.85
YBX3-212ENST00000542002 DGKAP23743 735 aa9.75□□□□□ -0.85
YBX3-212ENST00000542002 RBL1P28749 1068 aa9.75□□□□□ -0.85
YBX3-212ENST00000542002 VIPR1P32241 457 aa9.75□□□□□ -0.85
YBX3-212ENST00000542002 CCT8P50990 548 aa9.75□□□□□ -0.85
YBX3-212ENST00000542002 SIM1P81133 766 aaPredicted RBP9.75□□□□□ -0.85
YBX3-212ENST00000542002 KLF1Q13351 362 aaPredicted RBP9.75□□□□□ -0.85
YBX3-212ENST00000542002 SUZ12Q15022 739 aaKnown RBP9.75□□□□□ -0.85
YBX3-212ENST00000542002 ACOX1Q15067 660 aa9.75□□□□□ -0.85
YBX3-212ENST00000542002 NOMO1Q15155 1222 aa9.75□□□□□ -0.85
YBX3-212ENST00000542002 QPCTQ16769 361 aa9.75□□□□□ -0.85
YBX3-212ENST00000542002 DENND2CQ68D51 928 aa9.75□□□□□ -0.85
YBX3-212ENST00000542002 ZNF662Q6ZS27 426 aa9.75□□□□□ -0.85
YBX3-212ENST00000542002 Q6ZVL8 140 aa9.75□□□□□ -0.85
YBX3-212ENST00000542002 BZW1Q7L1Q6 419 aaKnown RBP9.75□□□□□ -0.85
YBX3-212ENST00000542002 TECPR1Q7Z6L1 1165 aa9.75□□□□□ -0.85
YBX3-212ENST00000542002 SYCE1Q8N0S2 351 aa9.75□□□□□ -0.85
YBX3-212ENST00000542002 EID2Q8N6I1 236 aa9.75□□□□□ -0.85
YBX3-212ENST00000542002 PAF1Q8N7H5 531 aa9.75□□□□□ -0.85
YBX3-212ENST00000542002 PNPLA1Q8N8W4 532 aa9.75□□□□□ -0.85
YBX3-212ENST00000542002 CCDC112Q8NEF3 446 aa9.75□□□□□ -0.85
YBX3-212ENST00000542002 DENND6BQ8NEG7 585 aa9.75□□□□□ -0.85
YBX3-212ENST00000542002 HTR3CQ8WXA8 447 aa9.75□□□□□ -0.85
YBX3-212ENST00000542002 OXNAD1Q96HP4 312 aaPredicted RBP9.75□□□□□ -0.85
YBX3-212ENST00000542002 QKIQ96PU8 341 aaKnown RBP eCLIP9.75□□□□□ -0.85
YBX3-212ENST00000542002 GORASP1Q9BQQ3 440 aa9.75□□□□□ -0.85
YBX3-212ENST00000542002 APOOQ9BUR5 198 aa9.75□□□□□ -0.85
YBX3-212ENST00000542002 KCNF1Q9H3M0 494 aa9.75□□□□□ -0.85
YBX3-212ENST00000542002 SLC32A1Q9H598 525 aa9.75□□□□□ -0.85
YBX3-212ENST00000542002 USP29Q9HBJ7 922 aa9.75□□□□□ -0.85
YBX3-212ENST00000542002 PCDH9Q9HC56 1237 aa9.75□□□□□ -0.85
YBX3-212ENST00000542002 LZTFL1Q9NQ48 299 aa9.75□□□□□ -0.85
YBX3-212ENST00000542002 DNAJC28Q9NX36 388 aa9.75□□□□□ -0.85
YBX3-212ENST00000542002 R3HDM2Q9Y2K5 976 aaKnown RBP9.75□□□□□ -0.85
YBX3-212ENST00000542002 ASPMQ8IZT6 3477 aa9.75□□□□□ -0.85
YBX3-212ENST00000542002 TMEM202A6NGA9 273 aa9.74□□□□□ -0.85
YBX3-212ENST00000542002 MIF4GDA9UHW6 222 aaKnown RBP9.74□□□□□ -0.85
YBX3-212ENST00000542002 ANKRD66B4E2M5 251 aa9.74□□□□□ -0.85
YBX3-212ENST00000542002 FLRT2O43155 660 aa9.74□□□□□ -0.85
YBX3-212ENST00000542002 GCATO75600 419 aa9.74□□□□□ -0.85
YBX3-212ENST00000542002 PIAS2O75928 621 aa9.74□□□□□ -0.85
YBX3-212ENST00000542002 NEBLO76041 1014 aa9.74□□□□□ -0.85
YBX3-212ENST00000542002 C1SP09871 688 aa9.74□□□□□ -0.85
YBX3-212ENST00000542002 MYF5P13349 255 aa9.74□□□□□ -0.85
YBX3-212ENST00000542002 NFKB1P19838 968 aa9.74□□□□□ -0.85
YBX3-212ENST00000542002 SPINK2P20155 84 aa9.74□□□□□ -0.85
YBX3-212ENST00000542002 PMLP29590 882 aa9.74□□□□□ -0.85
YBX3-212ENST00000542002 TRIM23P36406 574 aa9.74□□□□□ -0.85
YBX3-212ENST00000542002 GRK6P43250 576 aa9.74□□□□□ -0.85
YBX3-212ENST00000542002 ARRB1P49407 418 aaPredicted RBP9.74□□□□□ -0.85
YBX3-212ENST00000542002 YPEL5P62699 121 aa9.74□□□□□ -0.85
YBX3-212ENST00000542002 XRCC4Q13426 336 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms