RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 CD86P42081 329 aa16.94■□□□□ 0.3
CD9-209ENST00000540891 WASHC5Q12768 1159 aa16.94■□□□□ 0.3
CD9-209ENST00000540891 EIF2B5Q13144 721 aaKnown RBP16.94■□□□□ 0.3
CD9-209ENST00000540891 TEX44Q53QW1 395 aa16.94■□□□□ 0.3
CD9-209ENST00000540891 PEX26Q7Z412 305 aa16.94■□□□□ 0.3
CD9-209ENST00000540891 ZC3H18Q86VM9 953 aaKnown RBP16.94■□□□□ 0.3
CD9-209ENST00000540891 SYCE1Q8N0S2 351 aa16.94■□□□□ 0.3
CD9-209ENST00000540891 PELI3Q8N2H9 469 aa16.94■□□□□ 0.3
CD9-209ENST00000540891 SLC25A45Q8N413 288 aa16.94■□□□□ 0.3
CD9-209ENST00000540891 RNF10Q8N5U6 811 aaKnown RBP16.94■□□□□ 0.3
CD9-209ENST00000540891 PLA2G15Q8NCC3 412 aa16.94■□□□□ 0.3
CD9-209ENST00000540891 TADA1Q96BN2 335 aa16.94■□□□□ 0.3
CD9-209ENST00000540891 IFT43Q96FT9 208 aa16.94■□□□□ 0.3
CD9-209ENST00000540891 IMP4Q96G21 291 aaKnown RBP16.94■□□□□ 0.3
CD9-209ENST00000540891 OSBPL8Q9BZF1 889 aa16.94■□□□□ 0.3
CD9-209ENST00000540891 HAUS2Q9NVX0 235 aa16.94■□□□□ 0.3
CD9-209ENST00000540891 TOR4AQ9NXH8 423 aa16.94■□□□□ 0.3
CD9-209ENST00000540891 NCOR2Q9Y618 2525 aa16.94■□□□□ 0.3
CD9-209ENST00000540891 A0A0J9YYE9 177 aa16.93■□□□□ 0.3
CD9-209ENST00000540891 GOLGA8CPA6NN73 597 aa16.93■□□□□ 0.3
CD9-209ENST00000540891 APOC4-APOC2K7ER74 178 aa16.93■□□□□ 0.3
CD9-209ENST00000540891 TOR1BO14657 336 aa16.93■□□□□ 0.3
CD9-209ENST00000540891 PIAS2O75928 621 aa16.93■□□□□ 0.3
CD9-209ENST00000540891 TRBC1P01850 177 aa16.93■□□□□ 0.3
CD9-209ENST00000540891 APOC2P02655 101 aa16.93■□□□□ 0.3
CD9-209ENST00000540891 CSF2P04141 144 aa16.93■□□□□ 0.3
CD9-209ENST00000540891 PCCBP05166 539 aa16.93■□□□□ 0.3
CD9-209ENST00000540891 GIMD1P0DJR0 217 aa16.93■□□□□ 0.3
CD9-209ENST00000540891 CYP2A6P11509 494 aaPredicted RBP16.93■□□□□ 0.3
CD9-209ENST00000540891 CD68P34810 354 aaPredicted RBP16.93■□□□□ 0.3
CD9-209ENST00000540891 HNF1BP35680 557 aa16.93■□□□□ 0.3
CD9-209ENST00000540891 YPEL5P62699 121 aa16.93■□□□□ 0.3
CD9-209ENST00000540891 ZNF211Q13398 564 aaPredicted RBP16.93■□□□□ 0.3
CD9-209ENST00000540891 INPP5AQ14642 412 aa16.93■□□□□ 0.3
CD9-209ENST00000540891 NOMO1Q15155 1222 aa16.93■□□□□ 0.3
CD9-209ENST00000540891 USP45Q70EL2 814 aa16.93■□□□□ 0.3
CD9-209ENST00000540891 HSD11B1LQ7Z5J1 315 aa16.93■□□□□ 0.3
CD9-209ENST00000540891 PARGQ86W56 976 aa16.93■□□□□ 0.3
CD9-209ENST00000540891 HES6Q96HZ4 224 aa16.93■□□□□ 0.3
CD9-209ENST00000540891 TEKT5Q96M29 485 aa16.93■□□□□ 0.3
CD9-209ENST00000540891 QKIQ96PU8 341 aaKnown RBP eCLIP16.93■□□□□ 0.3
CD9-209ENST00000540891 RBM15Q96T37 977 aaKnown RBP eCLIP16.93■□□□□ 0.3
CD9-209ENST00000540891 SLC25A51Q9H1U9 297 aa16.93■□□□□ 0.3
CD9-209ENST00000540891 PCDH9Q9HC56 1237 aa16.93■□□□□ 0.3
CD9-209ENST00000540891 UCKL1Q9NWZ5 548 aa16.93■□□□□ 0.3
CD9-209ENST00000540891 DNAJC28Q9NX36 388 aa16.93■□□□□ 0.3
CD9-209ENST00000540891 WASF3Q9UPY6 502 aa16.93■□□□□ 0.3
CD9-209ENST00000540891 CAPN8A6NHC0 703 aa16.92■□□□□ 0.3
CD9-209ENST00000540891 MIF4GDA9UHW6 222 aaKnown RBP16.92■□□□□ 0.3
CD9-209ENST00000540891 TOP3BO95985 862 aaKnown RBP16.92■□□□□ 0.3
CD9-209ENST00000540891 NME1P15531 152 aaKnown RBP16.92■□□□□ 0.3
CD9-209ENST00000540891 DGKAP23743 735 aa16.92■□□□□ 0.3
CD9-209ENST00000540891 ACOX1Q15067 660 aa16.92■□□□□ 0.3
CD9-209ENST00000540891 CRTC1Q6UUV9 634 aa16.92■□□□□ 0.3
CD9-209ENST00000540891 NYAP1Q6ZVC0 841 aa16.92■□□□□ 0.3
CD9-209ENST00000540891 SLCO6A1Q86UG4 719 aa16.92■□□□□ 0.3
CD9-209ENST00000540891 EID2Q8N6I1 236 aa16.92■□□□□ 0.3
CD9-209ENST00000540891 LPCAT1Q8NF37 534 aa16.92■□□□□ 0.3
CD9-209ENST00000540891 ACTL9Q8TC94 416 aa16.92■□□□□ 0.3
CD9-209ENST00000540891 TRIB3Q96RU7 358 aa16.92■□□□□ 0.3
CD9-209ENST00000540891 APOOQ9BUR5 198 aa16.92■□□□□ 0.3
CD9-209ENST00000540891 TSGA10Q9BZW7 698 aa16.92■□□□□ 0.3
CD9-209ENST00000540891 C10orf88Q9H8K7 445 aa16.92■□□□□ 0.3
CD9-209ENST00000540891 GLOD4Q9HC38 313 aa16.92■□□□□ 0.3
CD9-209ENST00000540891 GUCA1BQ9UMX6 200 aa16.92■□□□□ 0.3
CD9-209ENST00000540891 COL5A1P20908 1838 aaPredicted RBP16.91■□□□□ 0.3
CD9-209ENST00000540891 SPEGQ15772 3267 aa16.91■□□□□ 0.3
CD9-209ENST00000540891 GOLGA6L3A6NEY3 463 aa16.91■□□□□ 0.3
CD9-209ENST00000540891 HACD1B0YJ81 288 aa16.91■□□□□ 0.3
CD9-209ENST00000540891 K7ESM1 405 aa16.91■□□□□ 0.3
CD9-209ENST00000540891 PSMD11O00231 422 aa16.91■□□□□ 0.3
CD9-209ENST00000540891 MT-CYBP00156 380 aaPredicted RBP16.91■□□□□ 0.3
CD9-209ENST00000540891 ATXN1LP0C7T5 689 aaKnown RBP16.91■□□□□ 0.3
CD9-209ENST00000540891 FTH1P19P0C7X4 201 aa16.91■□□□□ 0.3
CD9-209ENST00000540891 ETV3P41162 512 aa16.91■□□□□ 0.3
CD9-209ENST00000540891 THOP1P52888 689 aa16.91■□□□□ 0.3
CD9-209ENST00000540891 RPL26P61254 145 aaKnown RBP16.91■□□□□ 0.3
CD9-209ENST00000540891 OTUD4Q01804 1114 aaKnown RBP16.91■□□□□ 0.3
CD9-209ENST00000540891 XRCC4Q13426 336 aa16.91■□□□□ 0.3
CD9-209ENST00000540891 MTM1Q13496 603 aa16.91■□□□□ 0.3
CD9-209ENST00000540891 PTK2BQ14289 1009 aa16.91■□□□□ 0.3
CD9-209ENST00000540891 CDKN3Q16667 212 aa16.91■□□□□ 0.3
CD9-209ENST00000540891 QPCTQ16769 361 aa16.91■□□□□ 0.3
CD9-209ENST00000540891 INAVAQ3KP66 663 aa16.91■□□□□ 0.3
CD9-209ENST00000540891 LRRC66Q68CR7 880 aa16.91■□□□□ 0.3
CD9-209ENST00000540891 DENND2CQ68D51 928 aa16.91■□□□□ 0.3
CD9-209ENST00000540891 MACC1Q6ZN28 852 aa16.91■□□□□ 0.3
CD9-209ENST00000540891 ZNF662Q6ZS27 426 aa16.91■□□□□ 0.3
CD9-209ENST00000540891 RFLNAQ6ZTI6 216 aa16.91■□□□□ 0.3
CD9-209ENST00000540891 TECPR1Q7Z6L1 1165 aa16.91■□□□□ 0.3
CD9-209ENST00000540891 SPATA22Q8NHS9 363 aa16.91■□□□□ 0.3
CD9-209ENST00000540891 HTR3CQ8WXA8 447 aa16.91■□□□□ 0.3
CD9-209ENST00000540891 DTD2Q96FN9 168 aa16.91■□□□□ 0.3
CD9-209ENST00000540891 LYSMD1Q96S90 227 aa16.91■□□□□ 0.3
CD9-209ENST00000540891 CDC6Q99741 560 aa16.91■□□□□ 0.3
CD9-209ENST00000540891 FAM118BQ9BPY3 351 aa16.91■□□□□ 0.3
CD9-209ENST00000540891 TCEAL2Q9H3H9 227 aaPredicted RBP16.91■□□□□ 0.3
CD9-209ENST00000540891 RPL26L1Q9UNX3 145 aaKnown RBP16.91■□□□□ 0.3
CD9-209ENST00000540891 OR1A2Q9Y585 309 aa16.91■□□□□ 0.3
CD9-209ENST00000540891 TRIM38O00635 465 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms