RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 AKTIPQ9H8T0 292 aa14.16□□□□□ -0.14
INO80E-203ENST00000540562 NUP214P35658 2090 aaPredicted RBP14.15□□□□□ -0.14
INO80E-203ENST00000540562 MYLKQ15746 1914 aa14.15□□□□□ -0.14
INO80E-203ENST00000540562 HEATR9A2RTY3 570 aa14.15□□□□□ -0.14
INO80E-203ENST00000540562 A8MX80 341 aa14.15□□□□□ -0.14
INO80E-203ENST00000540562 ACOT8O14734 319 aa14.15□□□□□ -0.14
INO80E-203ENST00000540562 FAM58BPP0C7Q3 252 aa14.15□□□□□ -0.14
INO80E-203ENST00000540562 ITGB6P18564 788 aa14.15□□□□□ -0.14
INO80E-203ENST00000540562 INHBCP55103 352 aa14.15□□□□□ -0.14
INO80E-203ENST00000540562 GPR162Q16538 588 aa14.15□□□□□ -0.14
INO80E-203ENST00000540562 RABL3Q5HYI8 236 aa14.15□□□□□ -0.14
INO80E-203ENST00000540562 RANBP10Q6VN20 620 aa14.15□□□□□ -0.14
INO80E-203ENST00000540562 USP50Q70EL3 339 aaPredicted RBP14.15□□□□□ -0.14
INO80E-203ENST00000540562 FAM47BQ8NA70 645 aa14.15□□□□□ -0.14
INO80E-203ENST00000540562 ABTB1Q969K4 478 aaPredicted RBP14.15□□□□□ -0.14
INO80E-203ENST00000540562 RMDN1Q96DB5 314 aa14.15□□□□□ -0.14
INO80E-203ENST00000540562 TMEM74Q96NL1 305 aa14.15□□□□□ -0.14
INO80E-203ENST00000540562 C6orf203Q9P0P8 240 aaPredicted RBP14.15□□□□□ -0.14
INO80E-203ENST00000540562 SLAMF8Q9P0V8 285 aa14.15□□□□□ -0.14
INO80E-203ENST00000540562 ANKRD6Q9Y2G4 727 aa14.15□□□□□ -0.14
INO80E-203ENST00000540562 DNAH14Q0VDD8 3507 aa14.15□□□□□ -0.14
INO80E-203ENST00000540562 IQCF5A8MTL0 148 aa14.15□□□□□ -0.14
INO80E-203ENST00000540562 GOT2P00505 430 aaKnown RBP14.15□□□□□ -0.14
INO80E-203ENST00000540562 ATP6V1B2P21281 511 aa14.15□□□□□ -0.14
INO80E-203ENST00000540562 HADHAP40939 763 aa14.15□□□□□ -0.14
INO80E-203ENST00000540562 HUNKP57058 714 aa14.15□□□□□ -0.14
INO80E-203ENST00000540562 SEMG2Q02383 582 aa14.15□□□□□ -0.14
INO80E-203ENST00000540562 PIWIL4Q7Z3Z4 852 aaKnown RBP14.15□□□□□ -0.14
INO80E-203ENST00000540562 LIMS2Q7Z4I7 341 aa14.15□□□□□ -0.14
INO80E-203ENST00000540562 PGBD5Q8N414 524 aa14.15□□□□□ -0.14
INO80E-203ENST00000540562 CYGBQ8WWM9 190 aa14.15□□□□□ -0.14
INO80E-203ENST00000540562 MCMBPQ9BTE3 642 aa14.15□□□□□ -0.14
INO80E-203ENST00000540562 FAM192AQ9GZU8 254 aa14.15□□□□□ -0.14
INO80E-203ENST00000540562 THEGQ9P2T0 379 aa14.15□□□□□ -0.14
INO80E-203ENST00000540562 GALPQ9UBC7 116 aa14.15□□□□□ -0.14
INO80E-203ENST00000540562 PRPF19Q9UMS4 504 aaKnown RBP14.15□□□□□ -0.14
INO80E-203ENST00000540562 A0A0J9YYE9 177 aa14.14□□□□□ -0.15
INO80E-203ENST00000540562 ARHGAP10A1A4S6 786 aa14.14□□□□□ -0.15
INO80E-203ENST00000540562 TRPC5OSA6NMA1 111 aa14.14□□□□□ -0.15
INO80E-203ENST00000540562 VILLO15195 856 aa14.14□□□□□ -0.15
INO80E-203ENST00000540562 BCAS2O75934 225 aaPredicted RBP14.14□□□□□ -0.15
INO80E-203ENST00000540562 ATP5BP06576 529 aaKnown RBP14.14□□□□□ -0.15
INO80E-203ENST00000540562 SNRPB2P08579 225 aaKnown RBP14.14□□□□□ -0.15
INO80E-203ENST00000540562 PCNAP12004 261 aa14.14□□□□□ -0.15
INO80E-203ENST00000540562 OR1E1P30953 314 aa14.14□□□□□ -0.15
INO80E-203ENST00000540562 PIK3CGP48736 1102 aa14.14□□□□□ -0.15
INO80E-203ENST00000540562 TRIM25Q14258 630 aaKnown RBP14.14□□□□□ -0.15
INO80E-203ENST00000540562 OR4D1Q15615 310 aa14.14□□□□□ -0.15
INO80E-203ENST00000540562 ZBTB49Q6ZSB9 765 aa14.14□□□□□ -0.15
INO80E-203ENST00000540562 ADGRG6Q86SQ4 1221 aa14.14□□□□□ -0.15
INO80E-203ENST00000540562 ZNF598Q86UK7 904 aaKnown RBP14.14□□□□□ -0.15
INO80E-203ENST00000540562 ZNF786Q8N393 782 aa14.14□□□□□ -0.15
INO80E-203ENST00000540562 RSPH1Q8WYR4 309 aa14.14□□□□□ -0.15
INO80E-203ENST00000540562 Q9H521 79 aa14.14□□□□□ -0.15
INO80E-203ENST00000540562 RNF103-CHMP3A0A140T963 221 aa14.14□□□□□ -0.15
INO80E-203ENST00000540562 SLC12A8A0AV02 714 aa14.14□□□□□ -0.15
INO80E-203ENST00000540562 TRIM38O00635 465 aa14.14□□□□□ -0.15
INO80E-203ENST00000540562 SOCS2O14508 198 aa14.14□□□□□ -0.15
INO80E-203ENST00000540562 KPNA6O60684 536 aa14.14□□□□□ -0.15
INO80E-203ENST00000540562 SRP72O76094 671 aaKnown RBP14.14□□□□□ -0.15
INO80E-203ENST00000540562 HGFP14210 728 aa14.14□□□□□ -0.15
INO80E-203ENST00000540562 OXTRP30559 389 aa14.14□□□□□ -0.15
INO80E-203ENST00000540562 SCNN1BP51168 640 aa14.14□□□□□ -0.15
INO80E-203ENST00000540562 STX1BP61266 288 aa14.14□□□□□ -0.15
INO80E-203ENST00000540562 CYHR1Q6ZMK1 362 aa14.14□□□□□ -0.15
INO80E-203ENST00000540562 CILP2Q8IUL8 1156 aa14.14□□□□□ -0.15
INO80E-203ENST00000540562 C19orf60Q96EN9 201 aa14.14□□□□□ -0.15
INO80E-203ENST00000540562 CNDP1Q96KN2 507 aa14.14□□□□□ -0.15
INO80E-203ENST00000540562 IL12RB2Q99665 862 aa14.14□□□□□ -0.15
INO80E-203ENST00000540562 ENTPD7Q9NQZ7 604 aa14.14□□□□□ -0.15
INO80E-203ENST00000540562 TREX1Q9NSU2 369 aa14.14□□□□□ -0.15
INO80E-203ENST00000540562 VTI1BQ9UEU0 232 aa14.14□□□□□ -0.15
INO80E-203ENST00000540562 CNOT6Q9ULM6 557 aaKnown RBP14.14□□□□□ -0.15
INO80E-203ENST00000540562 TRPV2Q9Y5S1 764 aa14.14□□□□□ -0.15
INO80E-203ENST00000540562 PYGLP06737 847 aa14.13□□□□□ -0.15
INO80E-203ENST00000540562 HOXD8P13378 290 aaPredicted RBP14.13□□□□□ -0.15
INO80E-203ENST00000540562 CALRP27797 417 aaKnown RBP14.13□□□□□ -0.15
INO80E-203ENST00000540562 GATMP50440 423 aa14.13□□□□□ -0.15
INO80E-203ENST00000540562 KCNQ1P51787 676 aa14.13□□□□□ -0.15
INO80E-203ENST00000540562 TBX4P57082 545 aa14.13□□□□□ -0.15
INO80E-203ENST00000540562 PLCL1Q15111 1095 aa14.13□□□□□ -0.15
INO80E-203ENST00000540562 TMEM86AQ8N2M4 240 aa14.13□□□□□ -0.15
INO80E-203ENST00000540562 OR7D4Q8NG98 312 aa14.13□□□□□ -0.15
INO80E-203ENST00000540562 B4GALNT2Q8NHY0 566 aa14.13□□□□□ -0.15
INO80E-203ENST00000540562 SNRNP27Q8WVK2 155 aaKnown RBP14.13□□□□□ -0.15
INO80E-203ENST00000540562 SLCO4A1Q96BD0 722 aa14.13□□□□□ -0.15
INO80E-203ENST00000540562 SPAG4Q9NPE6 437 aa14.13□□□□□ -0.15
INO80E-203ENST00000540562 ZDHHC7Q9NXF8 308 aa14.13□□□□□ -0.15
INO80E-203ENST00000540562 CROTQ9UKG9 612 aa14.13□□□□□ -0.15
INO80E-203ENST00000540562 IKZF3Q9UKT9 509 aa14.13□□□□□ -0.15
INO80E-203ENST00000540562 DNAJC15Q9Y5T4 150 aa14.13□□□□□ -0.15
INO80E-203ENST00000540562 PTCH2Q9Y6C5 1203 aa14.13□□□□□ -0.15
INO80E-203ENST00000540562 CCDC162PA2VCL2 907 aa14.13□□□□□ -0.15
INO80E-203ENST00000540562 INPP4BO15327 924 aa14.13□□□□□ -0.15
INO80E-203ENST00000540562 NRP2O60462 931 aa14.13□□□□□ -0.15
INO80E-203ENST00000540562 RTN3O95197 1032 aaPredicted RBP14.13□□□□□ -0.15
INO80E-203ENST00000540562 ADRA1AP35348 466 aa14.13□□□□□ -0.15
INO80E-203ENST00000540562 CDC42EP1Q00587 391 aa14.13□□□□□ -0.15
INO80E-203ENST00000540562 C18orf21Q32NC0 220 aaPredicted RBP14.13□□□□□ -0.15
INO80E-203ENST00000540562 SPRYD7Q5W111 196 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms