RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 CINPQ9BW66 212 aaPredicted RBP11.49□□□□□ -0.57
TMEM258-205ENST00000540434 NT5MQ9NPB1 228 aa11.49□□□□□ -0.57
TMEM258-205ENST00000540434 DDX56Q9NY93 547 aaKnown RBP11.49□□□□□ -0.57
TMEM258-205ENST00000540434 DONSONQ9NYP3 566 aa11.49□□□□□ -0.57
TMEM258-205ENST00000540434 HEMK1Q9Y5R4 338 aaPredicted RBP11.49□□□□□ -0.57
TMEM258-205ENST00000540434 A0A1B0GTQ1 180 aa11.48□□□□□ -0.57
TMEM258-205ENST00000540434 TCRBV7S2A1N4TA0A589 114 aa11.48□□□□□ -0.57
TMEM258-205ENST00000540434 TSPAN11A1L157 253 aa11.48□□□□□ -0.57
TMEM258-205ENST00000540434 IGLON5A6NGN9 336 aa11.48□□□□□ -0.57
TMEM258-205ENST00000540434 A8MX80 341 aa11.48□□□□□ -0.57
TMEM258-205ENST00000540434 APOL1O14791 398 aa11.48□□□□□ -0.57
TMEM258-205ENST00000540434 PCDH8O95206 1070 aa11.48□□□□□ -0.57
TMEM258-205ENST00000540434 ZRANB2O95218 330 aaKnown RBP eCLIP11.48□□□□□ -0.57
TMEM258-205ENST00000540434 PAK4O96013 591 aaPredicted RBP11.48□□□□□ -0.57
TMEM258-205ENST00000540434 JCHAINP01591 159 aa11.48□□□□□ -0.57
TMEM258-205ENST00000540434 MMP2P08253 660 aa11.48□□□□□ -0.57
TMEM258-205ENST00000540434 PDHA1P08559 390 aa11.48□□□□□ -0.57
TMEM258-205ENST00000540434 CDK4P11802 303 aa11.48□□□□□ -0.57
TMEM258-205ENST00000540434 GM2AP17900 193 aa11.48□□□□□ -0.57
TMEM258-205ENST00000540434 SERPINB6P35237 376 aa11.48□□□□□ -0.57
TMEM258-205ENST00000540434 MMP13P45452 471 aa11.48□□□□□ -0.57
TMEM258-205ENST00000540434 ACADVLP49748 655 aa11.48□□□□□ -0.57
TMEM258-205ENST00000540434 CLDN2P57739 230 aa11.48□□□□□ -0.57
TMEM258-205ENST00000540434 DSC2Q02487 901 aa11.48□□□□□ -0.57
TMEM258-205ENST00000540434 PPIDQ08752 370 aaKnown RBP11.48□□□□□ -0.57
TMEM258-205ENST00000540434 KIF5AQ12840 1032 aa11.48□□□□□ -0.57
TMEM258-205ENST00000540434 RFTN1Q14699 578 aaPredicted RBP11.48□□□□□ -0.57
TMEM258-205ENST00000540434 SHBQ15464 509 aa11.48□□□□□ -0.57
TMEM258-205ENST00000540434 TEAD4Q15561 434 aa11.48□□□□□ -0.57
TMEM258-205ENST00000540434 IFI16Q16666 785 aaKnown RBP11.48□□□□□ -0.57
TMEM258-205ENST00000540434 TPRG1LQ5T0D9 272 aa11.48□□□□□ -0.57
TMEM258-205ENST00000540434 MARC1Q5VT66 337 aa11.48□□□□□ -0.57
TMEM258-205ENST00000540434 TTC7BQ86TV6 843 aa11.48□□□□□ -0.57
TMEM258-205ENST00000540434 TRIM69Q86WT6 500 aa11.48□□□□□ -0.57
TMEM258-205ENST00000540434 HORMAD1Q86X24 394 aa11.48□□□□□ -0.57
TMEM258-205ENST00000540434 VSIG1Q86XK7 387 aa11.48□□□□□ -0.57
TMEM258-205ENST00000540434 SPATS2Q86XZ4 545 aaKnown RBP11.48□□□□□ -0.57
TMEM258-205ENST00000540434 RCOR2Q8IZ40 523 aa11.48□□□□□ -0.57
TMEM258-205ENST00000540434 CACTIN-AS1Q8N1I8 211 aa11.48□□□□□ -0.57
TMEM258-205ENST00000540434 EXD3Q8N9H8 876 aa11.48□□□□□ -0.57
TMEM258-205ENST00000540434 EXD1Q8NHP7 514 aa11.48□□□□□ -0.57
TMEM258-205ENST00000540434 HDAC11Q96DB2 347 aa11.48□□□□□ -0.57
TMEM258-205ENST00000540434 ECHDC3Q96DC8 303 aa11.48□□□□□ -0.57
TMEM258-205ENST00000540434 CNDP2Q96KP4 475 aaKnown RBP11.48□□□□□ -0.57
TMEM258-205ENST00000540434 BMFQ96LC9 184 aa11.48□□□□□ -0.57
TMEM258-205ENST00000540434 NUDCD1Q96RS6 583 aa11.48□□□□□ -0.57
TMEM258-205ENST00000540434 KLF6Q99612 283 aaPredicted RBP11.48□□□□□ -0.57
TMEM258-205ENST00000540434 FAM117AQ9C073 453 aa11.48□□□□□ -0.57
TMEM258-205ENST00000540434 KDM4CQ9H3R0 1056 aa11.48□□□□□ -0.57
TMEM258-205ENST00000540434 RBM22Q9NW64 420 aaKnown RBP eCLIP11.48□□□□□ -0.57
TMEM258-205ENST00000540434 DKK3Q9UBP4 350 aa11.48□□□□□ -0.57
TMEM258-205ENST00000540434 SEPT3Q9UH03 358 aa11.48□□□□□ -0.57
TMEM258-205ENST00000540434 GUCA1BQ9UMX6 200 aa11.48□□□□□ -0.57
TMEM258-205ENST00000540434 COQ6Q9Y2Z9 468 aa11.48□□□□□ -0.57
TMEM258-205ENST00000540434 AP1G1O43747 822 aa11.47□□□□□ -0.57
TMEM258-205ENST00000540434 MMP20O60882 483 aa11.47□□□□□ -0.57
TMEM258-205ENST00000540434 IPO7O95373 1038 aaKnown RBP11.47□□□□□ -0.57
TMEM258-205ENST00000540434 LDOC1O95751 146 aaPredicted RBP11.47□□□□□ -0.57
TMEM258-205ENST00000540434 PRLP01236 227 aa11.47□□□□□ -0.57
TMEM258-205ENST00000540434 CCNB1P14635 433 aa11.47□□□□□ -0.57
TMEM258-205ENST00000540434 RALGDSQ12967 914 aa11.47□□□□□ -0.57
TMEM258-205ENST00000540434 UGP2Q16851 508 aa11.47□□□□□ -0.57
TMEM258-205ENST00000540434 C4orf17Q53FE4 359 aa11.47□□□□□ -0.57
TMEM258-205ENST00000540434 BROXQ5VW32 411 aa11.47□□□□□ -0.57
TMEM258-205ENST00000540434 CCDC13Q8IYE1 715 aa11.47□□□□□ -0.57
TMEM258-205ENST00000540434 TMEM145Q8NBT3 493 aa11.47□□□□□ -0.57
TMEM258-205ENST00000540434 CCNYQ8ND76 341 aa11.47□□□□□ -0.57
TMEM258-205ENST00000540434 ZNF248Q8NDW4 579 aa11.47□□□□□ -0.57
TMEM258-205ENST00000540434 SERAC1Q96JX3 654 aa11.47□□□□□ -0.57
TMEM258-205ENST00000540434 IL12RB2Q99665 862 aa11.47□□□□□ -0.57
TMEM258-205ENST00000540434 SEMA3CQ99985 751 aa11.47□□□□□ -0.57
TMEM258-205ENST00000540434 WRAP53Q9BUR4 548 aaKnown RBP11.47□□□□□ -0.57
TMEM258-205ENST00000540434 C1QTNF2Q9BXJ5 285 aa11.47□□□□□ -0.57
TMEM258-205ENST00000540434 OSBPL1AQ9BXW6 950 aa11.47□□□□□ -0.57
TMEM258-205ENST00000540434 MAK16Q9BXY0 300 aaKnown RBP11.47□□□□□ -0.57
TMEM258-205ENST00000540434 PREBQ9HCU5 417 aa11.47□□□□□ -0.57
TMEM258-205ENST00000540434 PCDH12Q9NPG4 1184 aa11.47□□□□□ -0.57
TMEM258-205ENST00000540434 LUC7LQ9NQ29 371 aaKnown RBP11.47□□□□□ -0.57
TMEM258-205ENST00000540434 DYRK4Q9NR20 520 aa11.47□□□□□ -0.57
TMEM258-205ENST00000540434 MBNL1Q9NR56 388 aaKnown RBP11.47□□□□□ -0.57
TMEM258-205ENST00000540434 ATP8A1Q9Y2Q0 1164 aa11.47□□□□□ -0.57
TMEM258-205ENST00000540434 PCDHB1Q9Y5F3 818 aa11.47□□□□□ -0.57
TMEM258-205ENST00000540434 POM121BA6NF01 834 aa11.46□□□□□ -0.57
TMEM258-205ENST00000540434 RIOK3O14730 519 aaKnown RBP11.46□□□□□ -0.57
TMEM258-205ENST00000540434 KLK10O43240 276 aa11.46□□□□□ -0.57
TMEM258-205ENST00000540434 HTRA2O43464 458 aaPredicted RBP11.46□□□□□ -0.57
TMEM258-205ENST00000540434 FZD6O60353 706 aa11.46□□□□□ -0.57
TMEM258-205ENST00000540434 DFNA5O60443 496 aa11.46□□□□□ -0.57
TMEM258-205ENST00000540434 CD68P34810 354 aaPredicted RBP11.46□□□□□ -0.57
TMEM258-205ENST00000540434 RACK1P63244 317 aaKnown RBP11.46□□□□□ -0.57
TMEM258-205ENST00000540434 RAD51Q06609 339 aa11.46□□□□□ -0.57
TMEM258-205ENST00000540434 BCL2L1Q07817 233 aa11.46□□□□□ -0.57
TMEM258-205ENST00000540434 AP1B1Q10567 949 aa11.46□□□□□ -0.57
TMEM258-205ENST00000540434 WASHC5Q12768 1159 aa11.46□□□□□ -0.57
TMEM258-205ENST00000540434 SFSWAPQ12872 951 aaKnown RBP11.46□□□□□ -0.57
TMEM258-205ENST00000540434 ZNF235Q14590 738 aa11.46□□□□□ -0.57
TMEM258-205ENST00000540434 PRKD1Q15139 912 aaPredicted RBP11.46□□□□□ -0.57
TMEM258-205ENST00000540434 INAVAQ3KP66 663 aa11.46□□□□□ -0.57
TMEM258-205ENST00000540434 TMEM52BQ4KMG9 183 aa11.46□□□□□ -0.57
TMEM258-205ENST00000540434 TFDP3Q5H9I0 405 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms