RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 THG1LQ9NWX6 298 aaKnown RBP16.94■□□□□ 0.3
COPS3-212ENST00000539941 LMCD1Q9NZU5 365 aa16.94■□□□□ 0.3
COPS3-212ENST00000539941 GGT7Q9UJ14 662 aa16.94■□□□□ 0.3
COPS3-212ENST00000539941 C2orf81A6NN90 581 aa16.94■□□□□ 0.3
COPS3-212ENST00000539941 GOLGA8TH3BQL2 631 aa16.94■□□□□ 0.3
COPS3-212ENST00000539941 TPP1O14773 563 aa16.94■□□□□ 0.3
COPS3-212ENST00000539941 HTRA2O43464 458 aaPredicted RBP16.94■□□□□ 0.3
COPS3-212ENST00000539941 RPP40O75818 363 aaKnown RBP16.94■□□□□ 0.3
COPS3-212ENST00000539941 PGLSO95336 258 aa16.94■□□□□ 0.3
COPS3-212ENST00000539941 PDHA1P08559 390 aa16.94■□□□□ 0.3
COPS3-212ENST00000539941 VIPR2P41587 438 aa16.94■□□□□ 0.3
COPS3-212ENST00000539941 CCNHP51946 323 aaPredicted RBP16.94■□□□□ 0.3
COPS3-212ENST00000539941 SEC24CP53992 1094 aa16.94■□□□□ 0.3
COPS3-212ENST00000539941 BCL2L1Q07817 233 aa16.94■□□□□ 0.3
COPS3-212ENST00000539941 GRM3Q14832 879 aa16.94■□□□□ 0.3
COPS3-212ENST00000539941 PDGFRLQ15198 375 aa16.94■□□□□ 0.3
COPS3-212ENST00000539941 SMAD1Q15797 465 aaKnown RBP16.94■□□□□ 0.3
COPS3-212ENST00000539941 QPCTQ16769 361 aa16.94■□□□□ 0.3
COPS3-212ENST00000539941 ZNF470Q6ECI4 717 aa16.94■□□□□ 0.3
COPS3-212ENST00000539941 RGS9BPQ6ZS82 235 aa16.94■□□□□ 0.3
COPS3-212ENST00000539941 GLT6D1Q7Z4J2 308 aa16.94■□□□□ 0.3
COPS3-212ENST00000539941 ADIPOR2Q86V24 386 aa16.94■□□□□ 0.3
COPS3-212ENST00000539941 CACNA2D3Q8IZS8 1091 aa16.94■□□□□ 0.3
COPS3-212ENST00000539941 NDUFAF2Q8N183 169 aa16.94■□□□□ 0.3
COPS3-212ENST00000539941 DCLK2Q8N568 766 aa16.94■□□□□ 0.3
COPS3-212ENST00000539941 GDAP1Q8TB36 358 aa16.94■□□□□ 0.3
COPS3-212ENST00000539941 SCG3Q8WXD2 468 aaKnown RBP16.94■□□□□ 0.3
COPS3-212ENST00000539941 MYO19Q96H55 970 aa16.94■□□□□ 0.3
COPS3-212ENST00000539941 PRDM6Q9NQX0 595 aa16.94■□□□□ 0.3
COPS3-212ENST00000539941 PCMTD2Q9NV79 361 aa16.94■□□□□ 0.3
COPS3-212ENST00000539941 NLE1Q9NVX2 485 aaPredicted RBP16.94■□□□□ 0.3
COPS3-212ENST00000539941 FBXO5Q9UKT4 447 aa16.94■□□□□ 0.3
COPS3-212ENST00000539941 CDH7Q9ULB5 785 aa16.94■□□□□ 0.3
COPS3-212ENST00000539941 CORO1CQ9ULV4 474 aaPredicted RBP16.94■□□□□ 0.3
COPS3-212ENST00000539941 PLLPQ9Y342 182 aa16.94■□□□□ 0.3
COPS3-212ENST00000539941 KIF26AQ9ULI4 1882 aaPredicted RBP16.93■□□□□ 0.3
COPS3-212ENST00000539941 HEPACAM2A8MVW5 462 aa16.93■□□□□ 0.3
COPS3-212ENST00000539941 ASLP04424 464 aa16.93■□□□□ 0.3
COPS3-212ENST00000539941 MPOP05164 745 aa16.93■□□□□ 0.3
COPS3-212ENST00000539941 DHRS4L1P0CG22 281 aa16.93■□□□□ 0.3
COPS3-212ENST00000539941 POLR2EP19388 210 aaKnown RBP16.93■□□□□ 0.3
COPS3-212ENST00000539941 TYK2P29597 1187 aa16.93■□□□□ 0.3
COPS3-212ENST00000539941 SLC1A2P43004 574 aa16.93■□□□□ 0.3
COPS3-212ENST00000539941 CTSOP43234 321 aaPredicted RBP16.93■□□□□ 0.3
COPS3-212ENST00000539941 ETV4P43268 484 aa16.93■□□□□ 0.3
COPS3-212ENST00000539941 CD151P48509 253 aa16.93■□□□□ 0.3
COPS3-212ENST00000539941 ZNF140P52738 457 aaPredicted RBP16.93■□□□□ 0.3
COPS3-212ENST00000539941 ADAM15Q13444 863 aa16.93■□□□□ 0.3
COPS3-212ENST00000539941 CCDC85BQ15834 202 aaPredicted RBP16.93■□□□□ 0.3
COPS3-212ENST00000539941 INSCQ1MX18 579 aa16.93■□□□□ 0.3
COPS3-212ENST00000539941 DGKKQ5KSL6 1271 aa16.93■□□□□ 0.3
COPS3-212ENST00000539941 MBLAC2Q68D91 279 aa16.93■□□□□ 0.3
COPS3-212ENST00000539941 GPR150Q8NGU9 434 aa16.93■□□□□ 0.3
COPS3-212ENST00000539941 HDAC10Q969S8 669 aa16.93■□□□□ 0.3
COPS3-212ENST00000539941 C19orf43Q9BQ61 176 aa16.93■□□□□ 0.3
COPS3-212ENST00000539941 VPS11Q9H270 941 aa16.93■□□□□ 0.3
COPS3-212ENST00000539941 EVLQ9UI08 416 aaPredicted RBP16.93■□□□□ 0.3
COPS3-212ENST00000539941 SLC27A6Q9Y2P4 619 aa16.93■□□□□ 0.3
COPS3-212ENST00000539941 PCDHB9Q9Y5E1 797 aa16.93■□□□□ 0.3
COPS3-212ENST00000539941 SPO11Q9Y5K1 396 aa16.93■□□□□ 0.3
COPS3-212ENST00000539941 ARL5AQ9Y689 179 aa16.93■□□□□ 0.3
COPS3-212ENST00000539941 TRAFD1O14545 582 aaPredicted RBP16.92■□□□□ 0.3
COPS3-212ENST00000539941 LINC01565O15544 149 aa16.92■□□□□ 0.3
COPS3-212ENST00000539941 AHCYL1O43865 530 aa16.92■□□□□ 0.3
COPS3-212ENST00000539941 GLRA3O75311 464 aa16.92■□□□□ 0.3
COPS3-212ENST00000539941 AHSGP02765 367 aa16.92■□□□□ 0.3
COPS3-212ENST00000539941 PRKCGP05129 697 aa16.92■□□□□ 0.3
COPS3-212ENST00000539941 LPOP22079 712 aaPredicted RBP16.92■□□□□ 0.3
COPS3-212ENST00000539941 SERPINA4P29622 427 aa16.92■□□□□ 0.3
COPS3-212ENST00000539941 LEPRP48357 1165 aaKnown RBP16.92■□□□□ 0.3
COPS3-212ENST00000539941 STK19P49842 368 aaPredicted RBP16.92■□□□□ 0.3
COPS3-212ENST00000539941 ARSDP51689 593 aa16.92■□□□□ 0.3
COPS3-212ENST00000539941 EPHB1P54762 984 aa16.92■□□□□ 0.3
COPS3-212ENST00000539941 PDK4Q16654 411 aa16.92■□□□□ 0.3
COPS3-212ENST00000539941 ATAT1Q5SQI0 421 aa16.92■□□□□ 0.3
COPS3-212ENST00000539941 KYAT3Q6YP21 454 aaKnown RBP16.92■□□□□ 0.3
COPS3-212ENST00000539941 DENND6AQ8IWF6 608 aa16.92■□□□□ 0.3
COPS3-212ENST00000539941 OR6P1Q8NGX9 317 aa16.92■□□□□ 0.3
COPS3-212ENST00000539941 PDCD6IPQ8WUM4 868 aaKnown RBP16.92■□□□□ 0.3
COPS3-212ENST00000539941 DNAJC1Q96KC8 554 aaKnown RBP16.92■□□□□ 0.3
COPS3-212ENST00000539941 RPL10LQ96L21 214 aaKnown RBP16.92■□□□□ 0.3
COPS3-212ENST00000539941 PAIP2Q9BPZ3 127 aaKnown RBP16.92■□□□□ 0.3
COPS3-212ENST00000539941 CPEB1Q9BZB8 566 aaKnown RBP16.92■□□□□ 0.3
COPS3-212ENST00000539941 NSRP1Q9H0G5 558 aaKnown RBP16.92■□□□□ 0.3
COPS3-212ENST00000539941 MAGEE1Q9HCI5 957 aa16.92■□□□□ 0.3
COPS3-212ENST00000539941 SNX15Q9NRS6 342 aa16.92■□□□□ 0.3
COPS3-212ENST00000539941 SLC17A7Q9P2U7 560 aa16.92■□□□□ 0.3
COPS3-212ENST00000539941 DCDC2Q9UHG0 476 aa16.92■□□□□ 0.3
COPS3-212ENST00000539941 GRID1Q9ULK0 1009 aa16.92■□□□□ 0.3
COPS3-212ENST00000539941 MTO1Q9Y2Z2 717 aaKnown RBP16.92■□□□□ 0.3
COPS3-212ENST00000539941 KCTD3Q9Y597 815 aa16.92■□□□□ 0.3
COPS3-212ENST00000539941 MTCH2Q9Y6C9 303 aa16.92■□□□□ 0.3
COPS3-212ENST00000539941 A0A1W2PQ67 120 aa16.91■□□□□ 0.3
COPS3-212ENST00000539941 CISD3P0C7P0 127 aa16.91■□□□□ 0.3
COPS3-212ENST00000539941 PIRTP0C851 137 aa16.91■□□□□ 0.3
COPS3-212ENST00000539941 FCARP24071 287 aa16.91■□□□□ 0.3
COPS3-212ENST00000539941 GABRB3P28472 473 aa16.91■□□□□ 0.3
COPS3-212ENST00000539941 SCTRP47872 440 aa16.91■□□□□ 0.3
COPS3-212ENST00000539941 DGKGP49619 791 aa16.91■□□□□ 0.3
COPS3-212ENST00000539941 RAD51Q06609 339 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms