RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 RAD51Q06609 339 aa17.19■□□□□ 0.34
LTBR-207ENST00000539925 BNIP1Q12981 228 aa17.19■□□□□ 0.34
LTBR-207ENST00000539925 HECTD2Q5U5R9 776 aa17.19■□□□□ 0.34
LTBR-207ENST00000539925 KIRREL3Q8IZU9 778 aa17.19■□□□□ 0.34
LTBR-207ENST00000539925 CELF5Q8N6W0 485 aaKnown RBP17.19■□□□□ 0.34
LTBR-207ENST00000539925 OR6Y1Q8NGX8 325 aa17.19■□□□□ 0.34
LTBR-207ENST00000539925 SCYL1Q96KG9 808 aa17.19■□□□□ 0.34
LTBR-207ENST00000539925 RMDN2Q96LZ7 410 aa17.19■□□□□ 0.34
LTBR-207ENST00000539925 CDCA3Q99618 268 aaPredicted RBP17.19■□□□□ 0.34
LTBR-207ENST00000539925 BBS2Q9BXC9 721 aa17.19■□□□□ 0.34
LTBR-207ENST00000539925 PIDD1Q9HB75 910 aa17.19■□□□□ 0.34
LTBR-207ENST00000539925 TXLNGQ9NUQ3 528 aa17.19■□□□□ 0.34
LTBR-207ENST00000539925 MRPS23Q9Y3D9 190 aaKnown RBP17.19■□□□□ 0.34
LTBR-207ENST00000539925 HCFC2Q9Y5Z7 792 aa17.19■□□□□ 0.34
LTBR-207ENST00000539925 COMMD10Q9Y6G5 202 aa17.19■□□□□ 0.34
LTBR-207ENST00000539925 CCDC195A0A1B0GUA6 201 aa17.18■□□□□ 0.34
LTBR-207ENST00000539925 PHGDHO43175 533 aaKnown RBP17.18■□□□□ 0.34
LTBR-207ENST00000539925 DNAJC6O75061 913 aa17.18■□□□□ 0.34
LTBR-207ENST00000539925 DNAJC8O75937 253 aaPredicted RBP17.18■□□□□ 0.34
LTBR-207ENST00000539925 CA3P07451 260 aa17.18■□□□□ 0.34
LTBR-207ENST00000539925 LTA4HP09960 611 aaKnown RBP17.18■□□□□ 0.34
LTBR-207ENST00000539925 KCNA4P22459 653 aa17.18■□□□□ 0.34
LTBR-207ENST00000539925 TTPAP49638 278 aa17.18■□□□□ 0.34
LTBR-207ENST00000539925 ABCE1P61221 599 aaKnown RBP17.18■□□□□ 0.34
LTBR-207ENST00000539925 LIPMQ5VYY2 423 aa17.18■□□□□ 0.34
LTBR-207ENST00000539925 LRRC8EQ6NSJ5 796 aa17.18■□□□□ 0.34
LTBR-207ENST00000539925 STK40Q8N2I9 435 aa17.18■□□□□ 0.34
LTBR-207ENST00000539925 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.18■□□□□ 0.34
LTBR-207ENST00000539925 OR4K2Q8NGD2 314 aa17.18■□□□□ 0.34
LTBR-207ENST00000539925 OR13C4Q8NGS5 318 aa17.18■□□□□ 0.34
LTBR-207ENST00000539925 PIWIL2Q8TC59 973 aaKnown RBP17.18■□□□□ 0.34
LTBR-207ENST00000539925 PDCD6IPQ8WUM4 868 aaKnown RBP17.18■□□□□ 0.34
LTBR-207ENST00000539925 BHMTQ93088 406 aa17.18■□□□□ 0.34
LTBR-207ENST00000539925 TTC1Q99614 292 aa17.18■□□□□ 0.34
LTBR-207ENST00000539925 CPEB1Q9BZB8 566 aaKnown RBP17.18■□□□□ 0.34
LTBR-207ENST00000539925 CCDC68Q9H2F9 335 aa17.18■□□□□ 0.34
LTBR-207ENST00000539925 SAR1AQ9NR31 198 aa17.18■□□□□ 0.34
LTBR-207ENST00000539925 OXSMQ9NWU1 459 aa17.18■□□□□ 0.34
LTBR-207ENST00000539925 KCTD3Q9Y597 815 aa17.18■□□□□ 0.34
LTBR-207ENST00000539925 PCDHB9Q9Y5E1 797 aa17.18■□□□□ 0.34
LTBR-207ENST00000539925 SPO11Q9Y5K1 396 aa17.18■□□□□ 0.34
LTBR-207ENST00000539925 A0A0G2JND7 137 aa17.17■□□□□ 0.34
LTBR-207ENST00000539925 CFAP73A6NFT4 308 aa17.17■□□□□ 0.34
LTBR-207ENST00000539925 GOLGA8CPA6NN73 597 aa17.17■□□□□ 0.34
LTBR-207ENST00000539925 G3V2L1 256 aa17.17■□□□□ 0.34
LTBR-207ENST00000539925 TOP3BO95985 862 aaKnown RBP17.17■□□□□ 0.34
LTBR-207ENST00000539925 PDHA1P08559 390 aa17.17■□□□□ 0.34
LTBR-207ENST00000539925 PABPC1P11940 636 aaKnown RBP17.17■□□□□ 0.34
LTBR-207ENST00000539925 CD9P21926 228 aa17.17■□□□□ 0.34
LTBR-207ENST00000539925 CD70P32970 193 aa17.17■□□□□ 0.34
LTBR-207ENST00000539925 VASPP50552 380 aaPredicted RBP17.17■□□□□ 0.34
LTBR-207ENST00000539925 RASSF2P50749 326 aa17.17■□□□□ 0.34
LTBR-207ENST00000539925 SUOXP51687 545 aa17.17■□□□□ 0.34
LTBR-207ENST00000539925 PTPN5P54829 565 aa17.17■□□□□ 0.34
LTBR-207ENST00000539925 IRF9Q00978 393 aa17.17■□□□□ 0.34
LTBR-207ENST00000539925 OVGP1Q12889 678 aa17.17■□□□□ 0.34
LTBR-207ENST00000539925 ACAP2Q15057 778 aa17.17■□□□□ 0.34
LTBR-207ENST00000539925 SLC5A9Q2M3M2 681 aa17.17■□□□□ 0.34
LTBR-207ENST00000539925 CERS6Q6ZMG9 384 aa17.17■□□□□ 0.34
LTBR-207ENST00000539925 GRASPQ7Z6J2 395 aaPredicted RBP17.17■□□□□ 0.34
LTBR-207ENST00000539925 RNF135Q8IUD6 432 aa17.17■□□□□ 0.34
LTBR-207ENST00000539925 CENPLQ8N0S6 344 aaPredicted RBP17.17■□□□□ 0.34
LTBR-207ENST00000539925 TTC30BQ8N4P2 665 aa17.17■□□□□ 0.34
LTBR-207ENST00000539925 FITM2Q8N6M3 262 aa17.17■□□□□ 0.34
LTBR-207ENST00000539925 ACVR1CQ8NER5 493 aa17.17■□□□□ 0.34
LTBR-207ENST00000539925 MDGA1Q8NFP4 955 aa17.17■□□□□ 0.34
LTBR-207ENST00000539925 KCTD4Q8WVF5 259 aa17.17■□□□□ 0.34
LTBR-207ENST00000539925 PPP2R3CQ969Q6 453 aa17.17■□□□□ 0.34
LTBR-207ENST00000539925 ZNF707Q96C28 371 aaPredicted RBP17.17■□□□□ 0.34
LTBR-207ENST00000539925 GPAMQ9HCL2 828 aa17.17■□□□□ 0.34
LTBR-207ENST00000539925 DZANK1Q9NVP4 752 aa17.17■□□□□ 0.34
LTBR-207ENST00000539925 PLK2Q9NYY3 685 aa17.17■□□□□ 0.34
LTBR-207ENST00000539925 DCTN4Q9UJW0 460 aa17.17■□□□□ 0.34
LTBR-207ENST00000539925 CCL26Q9Y258 94 aa17.17■□□□□ 0.34
LTBR-207ENST00000539925 ZNF711Q9Y462 761 aa17.17■□□□□ 0.34
LTBR-207ENST00000539925 MYLKQ15746 1914 aa17.17■□□□□ 0.34
LTBR-207ENST00000539925 TRAFD1O14545 582 aaPredicted RBP17.16■□□□□ 0.34
LTBR-207ENST00000539925 NDUFS3O75489 264 aa17.16■□□□□ 0.34
LTBR-207ENST00000539925 UBOX5O94941 541 aa17.16■□□□□ 0.34
LTBR-207ENST00000539925 MT-CO1P00395 513 aa17.16■□□□□ 0.34
LTBR-207ENST00000539925 HMGCLP35914 325 aa17.16■□□□□ 0.34
LTBR-207ENST00000539925 ZBTB16Q05516 673 aa17.16■□□□□ 0.34
LTBR-207ENST00000539925 SF3A3Q12874 501 aaKnown RBP eCLIP17.16■□□□□ 0.34
LTBR-207ENST00000539925 ATXN7L2Q5T6C5 722 aaPredicted RBP17.16■□□□□ 0.34
LTBR-207ENST00000539925 TMEM25Q86YD3 366 aa17.16■□□□□ 0.34
LTBR-207ENST00000539925 ARID3BQ8IVW6 561 aaPredicted RBP17.16■□□□□ 0.34
LTBR-207ENST00000539925 CEP97Q8IW35 865 aa17.16■□□□□ 0.34
LTBR-207ENST00000539925 MFSD6LQ8IWD5 586 aa17.16■□□□□ 0.34
LTBR-207ENST00000539925 AHI1Q8N157 1196 aa17.16■□□□□ 0.34
LTBR-207ENST00000539925 FSTL5Q8N475 847 aaPredicted RBP17.16■□□□□ 0.34
LTBR-207ENST00000539925 SMG7Q92540 1137 aaKnown RBP17.16■□□□□ 0.34
LTBR-207ENST00000539925 NSMCE3Q96MG7 304 aa17.16■□□□□ 0.34
LTBR-207ENST00000539925 ZNF641Q96N77 438 aaPredicted RBP17.16■□□□□ 0.34
LTBR-207ENST00000539925 TMEM120AQ9BXJ8 343 aa17.16■□□□□ 0.34
LTBR-207ENST00000539925 SMG9Q9H0W8 520 aaKnown RBP17.16■□□□□ 0.34
LTBR-207ENST00000539925 TLE6Q9H808 572 aa17.16■□□□□ 0.34
LTBR-207ENST00000539925 SFXN1Q9H9B4 322 aa17.16■□□□□ 0.34
LTBR-207ENST00000539925 SYTL2Q9HCH5 934 aa17.16■□□□□ 0.34
LTBR-207ENST00000539925 MARCH4Q9P2E8 410 aaPredicted RBP17.16■□□□□ 0.34
LTBR-207ENST00000539925 INTS6Q9UL03 887 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms