RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 COL6A2P12110 1019 aa14.1□□□□□ -0.15
UBE3B-210ENST00000539599 CCND3P30281 292 aaPredicted RBP14.1□□□□□ -0.15
UBE3B-210ENST00000539599 LEPRP48357 1165 aaKnown RBP14.1□□□□□ -0.15
UBE3B-210ENST00000539599 PFKFB4Q16877 469 aa14.1□□□□□ -0.15
UBE3B-210ENST00000539599 TMEM102Q8N9M5 508 aaPredicted RBP14.1□□□□□ -0.15
UBE3B-210ENST00000539599 ARRDC2Q8TBH0 407 aa14.1□□□□□ -0.15
UBE3B-210ENST00000539599 SLCO4A1Q96BD0 722 aa14.1□□□□□ -0.15
UBE3B-210ENST00000539599 SUSD3Q96L08 255 aa14.1□□□□□ -0.15
UBE3B-210ENST00000539599 RPRD1AQ96P16 312 aaPredicted RBP14.1□□□□□ -0.15
UBE3B-210ENST00000539599 SLC29A1Q99808 456 aa14.1□□□□□ -0.15
UBE3B-210ENST00000539599 CCSER2Q9H7U1 834 aa14.1□□□□□ -0.15
UBE3B-210ENST00000539599 VPS45Q9NRW7 570 aa14.1□□□□□ -0.15
UBE3B-210ENST00000539599 POLR3BQ9NW08 1133 aaPredicted RBP14.1□□□□□ -0.15
UBE3B-210ENST00000539599 GALPQ9UBC7 116 aa14.1□□□□□ -0.15
UBE3B-210ENST00000539599 EGFL7Q9UHF1 273 aa14.1□□□□□ -0.15
UBE3B-210ENST00000539599 PRSS51A0A1B0GVH4 220 aa14.1□□□□□ -0.15
UBE3B-210ENST00000539599 FAM149AA5PLN7 773 aa14.1□□□□□ -0.15
UBE3B-210ENST00000539599 CCDC160A6NGH7 325 aa14.1□□□□□ -0.15
UBE3B-210ENST00000539599 PLOD2O00469 737 aa14.1□□□□□ -0.15
UBE3B-210ENST00000539599 TADA2AO75478 443 aa14.1□□□□□ -0.15
UBE3B-210ENST00000539599 CKMT2P17540 419 aa14.1□□□□□ -0.15
UBE3B-210ENST00000539599 KCNQ1P51787 676 aa14.1□□□□□ -0.15
UBE3B-210ENST00000539599 SLC7A2P52569 658 aa14.1□□□□□ -0.15
UBE3B-210ENST00000539599 LRP8Q14114 963 aa14.1□□□□□ -0.15
UBE3B-210ENST00000539599 CYTH1Q15438 398 aa14.1□□□□□ -0.15
UBE3B-210ENST00000539599 UNC50Q53HI1 259 aa14.1□□□□□ -0.15
UBE3B-210ENST00000539599 CLLU1OSQ5K130 101 aa14.1□□□□□ -0.15
UBE3B-210ENST00000539599 AGAP9Q5VTM2 703 aa14.1□□□□□ -0.15
UBE3B-210ENST00000539599 FUNDC1Q8IVP5 155 aa14.1□□□□□ -0.15
UBE3B-210ENST00000539599 ZNF683Q8IZ20 524 aa14.1□□□□□ -0.15
UBE3B-210ENST00000539599 MYO1HQ8N1T3 1032 aa14.1□□□□□ -0.15
UBE3B-210ENST00000539599 PTGR2Q8N8N7 351 aaPredicted RBP14.1□□□□□ -0.15
UBE3B-210ENST00000539599 UBXN10Q96LJ8 280 aa14.1□□□□□ -0.15
UBE3B-210ENST00000539599 CIB1Q99828 191 aa14.1□□□□□ -0.15
UBE3B-210ENST00000539599 VCX3BQ9H321 246 aa14.1□□□□□ -0.15
UBE3B-210ENST00000539599 COQ10BQ9H8M1 238 aa14.1□□□□□ -0.15
UBE3B-210ENST00000539599 TBC1D13Q9NVG8 400 aa14.1□□□□□ -0.15
UBE3B-210ENST00000539599 LZTS1Q9Y250 596 aa14.1□□□□□ -0.15
UBE3B-210ENST00000539599 SNX13Q9Y5W8 968 aa14.1□□□□□ -0.15
UBE3B-210ENST00000539599 PDE4DIPQ5VU43 2346 aa14.09□□□□□ -0.15
UBE3B-210ENST00000539599 UBA6A0AVT1 1052 aaPredicted RBP14.09□□□□□ -0.15
UBE3B-210ENST00000539599 CCDC162PA2VCL2 907 aa14.09□□□□□ -0.15
UBE3B-210ENST00000539599 NR5A2O00482 541 aa14.09□□□□□ -0.15
UBE3B-210ENST00000539599 TSPAN3O60637 253 aa14.09□□□□□ -0.15
UBE3B-210ENST00000539599 TIPRLO75663 272 aa14.09□□□□□ -0.15
UBE3B-210ENST00000539599 FAM163BP0C2L3 166 aa14.09□□□□□ -0.15
UBE3B-210ENST00000539599 ELNP15502 786 aa14.09□□□□□ -0.15
UBE3B-210ENST00000539599 GRM2Q14416 872 aa14.09□□□□□ -0.15
UBE3B-210ENST00000539599 VPS26BQ4G0F5 336 aa14.09□□□□□ -0.15
UBE3B-210ENST00000539599 RARS2Q5T160 578 aaKnown RBP14.09□□□□□ -0.15
UBE3B-210ENST00000539599 TIGD7Q6NT04 549 aaPredicted RBP14.09□□□□□ -0.15
UBE3B-210ENST00000539599 GIPC2Q8TF65 315 aa14.09□□□□□ -0.15
UBE3B-210ENST00000539599 C6orf203Q9P0P8 240 aaPredicted RBP14.09□□□□□ -0.15
UBE3B-210ENST00000539599 PATJQ8NI35 1801 aa14.09□□□□□ -0.15
UBE3B-210ENST00000539599 UNCXA6NJT0 531 aa14.09□□□□□ -0.15
UBE3B-210ENST00000539599 TRPC5OSA6NMA1 111 aa14.09□□□□□ -0.15
UBE3B-210ENST00000539599 MRASO14807 208 aa14.09□□□□□ -0.15
UBE3B-210ENST00000539599 TFAP2AP05549 437 aa14.09□□□□□ -0.15
UBE3B-210ENST00000539599 PRDX3P30048 256 aaKnown RBP14.09□□□□□ -0.15
UBE3B-210ENST00000539599 RGRP47804 291 aa14.09□□□□□ -0.15
UBE3B-210ENST00000539599 ROR2Q01974 943 aaKnown RBP14.09□□□□□ -0.15
UBE3B-210ENST00000539599 DSC3Q14574 896 aa14.09□□□□□ -0.15
UBE3B-210ENST00000539599 KIF19Q2TAC6 998 aa14.09□□□□□ -0.15
UBE3B-210ENST00000539599 C10orf120Q5SQS8 335 aa14.09□□□□□ -0.15
UBE3B-210ENST00000539599 ZNF678Q5SXM1 525 aa14.09□□□□□ -0.15
UBE3B-210ENST00000539599 LZTR1Q8N653 840 aa14.09□□□□□ -0.15
UBE3B-210ENST00000539599 TRPC4APQ8TEL6 797 aa14.09□□□□□ -0.15
UBE3B-210ENST00000539599 SLC39A13Q96H72 371 aa14.09□□□□□ -0.15
UBE3B-210ENST00000539599 SERPINB11Q96P15 392 aa14.09□□□□□ -0.15
UBE3B-210ENST00000539599 PHF12Q96QT6 1004 aa14.09□□□□□ -0.15
UBE3B-210ENST00000539599 ZBED2Q9BTP6 218 aa14.09□□□□□ -0.15
UBE3B-210ENST00000539599 ZYG11BQ9C0D3 744 aa14.09□□□□□ -0.15
UBE3B-210ENST00000539599 AKTIPQ9H8T0 292 aa14.09□□□□□ -0.15
UBE3B-210ENST00000539599 PRDM5Q9NQX1 630 aaPredicted RBP14.09□□□□□ -0.15
UBE3B-210ENST00000539599 PCDH10Q9P2E7 1040 aa14.09□□□□□ -0.15
UBE3B-210ENST00000539599 TIMM22Q9Y584 194 aa14.09□□□□□ -0.15
UBE3B-210ENST00000539599 FNDC1Q4ZHG4 1894 aaPredicted RBP14.08□□□□□ -0.15
UBE3B-210ENST00000539599 DOCK4Q8N1I0 1966 aa14.08□□□□□ -0.15
UBE3B-210ENST00000539599 SLC12A8A0AV02 714 aa14.08□□□□□ -0.16
UBE3B-210ENST00000539599 LINC00032P0C843 101 aa14.08□□□□□ -0.16
UBE3B-210ENST00000539599 MGAT5BQ3V5L5 792 aa14.08□□□□□ -0.16
UBE3B-210ENST00000539599 NADK2Q4G0N4 442 aa14.08□□□□□ -0.16
UBE3B-210ENST00000539599 C6orf10Q5SRN2 563 aa14.08□□□□□ -0.16
UBE3B-210ENST00000539599 RSPO2Q6UXX9 243 aaPredicted RBP14.08□□□□□ -0.16
UBE3B-210ENST00000539599 RBM44Q6ZP01 1051 aaKnown RBP14.08□□□□□ -0.16
UBE3B-210ENST00000539599 RASAL3Q86YV0 1011 aa14.08□□□□□ -0.16
UBE3B-210ENST00000539599 TICAM1Q8IUC6 712 aa14.08□□□□□ -0.16
UBE3B-210ENST00000539599 DDIASQ8IXT1 998 aa14.08□□□□□ -0.16
UBE3B-210ENST00000539599 OR7D4Q8NG98 312 aa14.08□□□□□ -0.16
UBE3B-210ENST00000539599 EME1Q96AY2 570 aa14.08□□□□□ -0.16
UBE3B-210ENST00000539599 SEPT5Q99719 369 aaPredicted RBP14.08□□□□□ -0.16
UBE3B-210ENST00000539599 CENPKQ9BS16 269 aa14.08□□□□□ -0.16
UBE3B-210ENST00000539599 NOL11Q9H8H0 719 aaKnown RBP14.08□□□□□ -0.16
UBE3B-210ENST00000539599 MEAF6Q9HAF1 191 aa14.08□□□□□ -0.16
UBE3B-210ENST00000539599 ATP13A1Q9HD20 1204 aa14.08□□□□□ -0.16
UBE3B-210ENST00000539599 MID1IP1Q9NPA3 183 aa14.08□□□□□ -0.16
UBE3B-210ENST00000539599 TBC1D30Q9Y2I9 924 aa14.08□□□□□ -0.16
UBE3B-210ENST00000539599 DNAJC15Q9Y5T4 150 aa14.08□□□□□ -0.16
UBE3B-210ENST00000539599 SLCO1B7G3V0H7 640 aa14.08□□□□□ -0.16
UBE3B-210ENST00000539599 TRIM38O00635 465 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms