RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 CDH15P55291 814 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 ATP6V0D1P61421 351 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 ADAM17P78536 824 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 SPATS1Q496A3 300 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 UNC50Q53HI1 259 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 ZNF678Q5SXM1 525 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 HECTD2Q5U5R9 776 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 AFMIDQ63HM1 303 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 CLEC6AQ6EIG7 209 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 TIGD7Q6NT04 549 aaPredicted RBP9.7□□□□□ -0.86
CDH13-204ENST00000539548 KLHL35Q6PF15 583 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 KDELC1Q6UW63 502 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 BEND5Q7L4P6 421 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 GPR141Q7Z602 305 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 RETREG3Q86VR2 466 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 CLYBLQ8N0X4 340 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 BBS5Q8N3I7 341 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 SNX31Q8N9S9 440 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 TNIP2Q8NFZ5 429 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 MIPOL1Q8TD10 442 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 FEM1CQ96JP0 617 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 SLC45A3Q96JT2 553 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 OSBPL6Q9BZF3 934 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 CATSPERBQ9H7T0 1116 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 LIN28AQ9H9Z2 209 aaKnown RBP9.7□□□□□ -0.86
CDH13-204ENST00000539548 C8orf4Q9NR00 106 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 AGPAT4Q9NRZ5 378 aa9.7□□□□□ -0.86
CDH13-204ENST00000539548 CHCHD3Q9NX63 227 aaKnown RBP9.7□□□□□ -0.86
CDH13-204ENST00000539548 hCG_2014768A0A024R1R8 64 aa9.69□□□□□ -0.86
CDH13-204ENST00000539548 PAPSS2O95340 614 aaPredicted RBP9.69□□□□□ -0.86
CDH13-204ENST00000539548 ALDOCP09972 364 aaKnown RBP9.69□□□□□ -0.86
CDH13-204ENST00000539548 C7P10643 843 aa9.69□□□□□ -0.86
CDH13-204ENST00000539548 KCNC1P48547 511 aa9.69□□□□□ -0.86
CDH13-204ENST00000539548 CRYBB1P53674 252 aaPredicted RBP9.69□□□□□ -0.86
CDH13-204ENST00000539548 WNT3AP56704 352 aa9.69□□□□□ -0.86
CDH13-204ENST00000539548 NFKB2Q00653 900 aa9.69□□□□□ -0.86
CDH13-204ENST00000539548 PLOD1Q02809 727 aaPredicted RBP9.69□□□□□ -0.86
CDH13-204ENST00000539548 BNIP2Q12982 314 aa9.69□□□□□ -0.86
CDH13-204ENST00000539548 INPP5AQ14642 412 aa9.69□□□□□ -0.86
CDH13-204ENST00000539548 PITRM1Q5JRX3 1037 aa9.69□□□□□ -0.86
CDH13-204ENST00000539548 BRMS1LQ5PSV4 323 aa9.69□□□□□ -0.86
CDH13-204ENST00000539548 TBCELQ5QJ74 424 aa9.69□□□□□ -0.86
CDH13-204ENST00000539548 ARTNQ5T4W7 220 aa9.69□□□□□ -0.86
CDH13-204ENST00000539548 MANEALQ5VSG8 457 aa9.69□□□□□ -0.86
CDH13-204ENST00000539548 LCN8Q6JVE9 175 aa9.69□□□□□ -0.86
CDH13-204ENST00000539548 TTC33Q6PID6 262 aaPredicted RBP9.69□□□□□ -0.86
CDH13-204ENST00000539548 ISCA2Q86U28 154 aa9.69□□□□□ -0.86
CDH13-204ENST00000539548 LRRC49Q8IUZ0 686 aa9.69□□□□□ -0.86
CDH13-204ENST00000539548 SLC15A3Q8IY34 581 aa9.69□□□□□ -0.86
CDH13-204ENST00000539548 CBR4Q8N4T8 237 aa9.69□□□□□ -0.86
CDH13-204ENST00000539548 FNDC8Q8TC99 324 aa9.69□□□□□ -0.86
CDH13-204ENST00000539548 ANKRD49Q8WVL7 239 aa9.69□□□□□ -0.86
CDH13-204ENST00000539548 C19orf60Q96EN9 201 aa9.69□□□□□ -0.86
CDH13-204ENST00000539548 C3orf30Q96M34 536 aa9.69□□□□□ -0.86
CDH13-204ENST00000539548 ASB2Q96Q27 587 aa9.69□□□□□ -0.86
CDH13-204ENST00000539548 SLC39A3Q9BRY0 314 aa9.69□□□□□ -0.86
CDH13-204ENST00000539548 TRIM62Q9BVG3 475 aa9.69□□□□□ -0.86
CDH13-204ENST00000539548 ATXN3LQ9H3M9 355 aa9.69□□□□□ -0.86
CDH13-204ENST00000539548 ABHD16BQ9H3Z7 469 aa9.69□□□□□ -0.86
CDH13-204ENST00000539548 AKTIPQ9H8T0 292 aa9.69□□□□□ -0.86
CDH13-204ENST00000539548 FBRSL1Q9HCM7 1045 aaKnown RBP9.69□□□□□ -0.86
CDH13-204ENST00000539548 ATP13A1Q9HD20 1204 aa9.69□□□□□ -0.86
CDH13-204ENST00000539548 ADARB2Q9NS39 739 aaKnown RBP9.69□□□□□ -0.86
CDH13-204ENST00000539548 SLC38A7Q9NVC3 462 aa9.69□□□□□ -0.86
CDH13-204ENST00000539548 SMOXQ9NWM0 555 aa9.69□□□□□ -0.86
CDH13-204ENST00000539548 GMPR2Q9P2T1 348 aaKnown RBP9.69□□□□□ -0.86
CDH13-204ENST00000539548 CDH7Q9ULB5 785 aa9.69□□□□□ -0.86
CDH13-204ENST00000539548 TRIP12Q14669 1992 aaPredicted RBP9.69□□□□□ -0.86
CDH13-204ENST00000539548 A0A0J9YYE9 177 aa9.68□□□□□ -0.86
CDH13-204ENST00000539548 ATP6AP2A0A1C7CYW4 349 aa9.68□□□□□ -0.86
CDH13-204ENST00000539548 DHRS12A0PJE2 317 aa9.68□□□□□ -0.86
CDH13-204ENST00000539548 SAC3D1A6NKF1 404 aa9.68□□□□□ -0.86
CDH13-204ENST00000539548 SLC7A4O43246 635 aa9.68□□□□□ -0.86
CDH13-204ENST00000539548 PAGE1O75459 146 aa9.68□□□□□ -0.86
CDH13-204ENST00000539548 ATP6AP2O75787 350 aa9.68□□□□□ -0.86
CDH13-204ENST00000539548 SUPT7LO94864 414 aa9.68□□□□□ -0.86
CDH13-204ENST00000539548 F2P00734 622 aa9.68□□□□□ -0.86
CDH13-204ENST00000539548 SERPINH1P50454 418 aaKnown RBP9.68□□□□□ -0.86
CDH13-204ENST00000539548 HERVK_113P63132 956 aa9.68□□□□□ -0.86
CDH13-204ENST00000539548 PRAMEP78395 509 aa9.68□□□□□ -0.86
CDH13-204ENST00000539548 MERTKQ12866 999 aa9.68□□□□□ -0.86
CDH13-204ENST00000539548 SLC36A3Q495N2 470 aa9.68□□□□□ -0.86
CDH13-204ENST00000539548 TMEM207Q6UWW9 146 aa9.68□□□□□ -0.86
CDH13-204ENST00000539548 KDELC2Q7Z4H8 507 aa9.68□□□□□ -0.86
CDH13-204ENST00000539548 SPRED1Q7Z699 444 aa9.68□□□□□ -0.86
CDH13-204ENST00000539548 GPR180Q86V85 440 aa9.68□□□□□ -0.86
CDH13-204ENST00000539548 CILP2Q8IUL8 1156 aa9.68□□□□□ -0.86
CDH13-204ENST00000539548 CLVS1Q8IUQ0 354 aaPredicted RBP9.68□□□□□ -0.86
CDH13-204ENST00000539548 LRRC43Q8N309 656 aa9.68□□□□□ -0.86
CDH13-204ENST00000539548 FAM110BQ8TC76 370 aa9.68□□□□□ -0.86
CDH13-204ENST00000539548 PPP1R13LQ8WUF5 828 aa9.68□□□□□ -0.86
CDH13-204ENST00000539548 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.68□□□□□ -0.86
CDH13-204ENST00000539548 ISOC1Q96CN7 298 aa9.68□□□□□ -0.86
CDH13-204ENST00000539548 CENPNQ96H22 339 aaPredicted RBP9.68□□□□□ -0.86
CDH13-204ENST00000539548 ZFP42Q96MM3 310 aa9.68□□□□□ -0.86
CDH13-204ENST00000539548 CYP2S1Q96SQ9 504 aa9.68□□□□□ -0.86
CDH13-204ENST00000539548 C9orf16Q9BUW7 83 aa9.68□□□□□ -0.86
CDH13-204ENST00000539548 ERVK-6Q9BXR3 956 aa9.68□□□□□ -0.86
CDH13-204ENST00000539548 SLC25A51Q9H1U9 297 aa9.68□□□□□ -0.86
CDH13-204ENST00000539548 CD320Q9NPF0 282 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms