RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 HEXDCQ8WVB3 486 aa14.85□□□□□ -0.03
ATL3-203ENST00000538786 GATA5Q9BWX5 397 aaPredicted RBP14.85□□□□□ -0.03
ATL3-203ENST00000538786 GPAMQ9HCL2 828 aa14.85□□□□□ -0.03
ATL3-203ENST00000538786 TLR9Q9NR96 1032 aa14.85□□□□□ -0.03
ATL3-203ENST00000538786 FCF1Q9Y324 198 aaKnown RBP14.85□□□□□ -0.03
ATL3-203ENST00000538786 TRAFD1O14545 582 aaPredicted RBP14.84□□□□□ -0.03
ATL3-203ENST00000538786 CCDC22O60826 627 aa14.84□□□□□ -0.03
ATL3-203ENST00000538786 HSPA4LO95757 839 aa14.84□□□□□ -0.03
ATL3-203ENST00000538786 LTA4HP09960 611 aaKnown RBP14.84□□□□□ -0.03
ATL3-203ENST00000538786 CCR2P41597 374 aa14.84□□□□□ -0.03
ATL3-203ENST00000538786 AP1S1P61966 158 aa14.84□□□□□ -0.03
ATL3-203ENST00000538786 ELF3P78545 371 aaPredicted RBP14.84□□□□□ -0.03
ATL3-203ENST00000538786 ASPHQ12797 758 aa14.84□□□□□ -0.03
ATL3-203ENST00000538786 TYSND1Q2T9J0 566 aa14.84□□□□□ -0.03
ATL3-203ENST00000538786 AGAP9Q5VTM2 703 aa14.84□□□□□ -0.03
ATL3-203ENST00000538786 AFTPHQ6ULP2 937 aa14.84□□□□□ -0.03
ATL3-203ENST00000538786 APCDD1Q8J025 514 aa14.84□□□□□ -0.03
ATL3-203ENST00000538786 SPATA6LQ8N4H0 392 aa14.84□□□□□ -0.03
ATL3-203ENST00000538786 PNPLA1Q8N8W4 532 aa14.84□□□□□ -0.03
ATL3-203ENST00000538786 OR4K2Q8NGD2 314 aa14.84□□□□□ -0.03
ATL3-203ENST00000538786 FIBINQ8TAL6 211 aa14.84□□□□□ -0.03
ATL3-203ENST00000538786 SPPL3Q8TCT6 385 aa14.84□□□□□ -0.03
ATL3-203ENST00000538786 POF1BQ8WVV4 589 aa14.84□□□□□ -0.03
ATL3-203ENST00000538786 UBXN10Q96LJ8 280 aa14.84□□□□□ -0.03
ATL3-203ENST00000538786 TMEM237Q96Q45 408 aa14.84□□□□□ -0.03
ATL3-203ENST00000538786 NMUR2Q9GZQ4 415 aa14.84□□□□□ -0.03
ATL3-203ENST00000538786 KLC4Q9NSK0 619 aa14.84□□□□□ -0.03
ATL3-203ENST00000538786 PNPOQ9NVS9 261 aa14.84□□□□□ -0.03
ATL3-203ENST00000538786 DNAJC28Q9NX36 388 aa14.84□□□□□ -0.03
ATL3-203ENST00000538786 KIAA1522Q9P206 1035 aaPredicted RBP14.84□□□□□ -0.03
ATL3-203ENST00000538786 LNPEPQ9UIQ6 1025 aa14.84□□□□□ -0.03
ATL3-203ENST00000538786 RWDD3Q9Y3V2 267 aa14.84□□□□□ -0.03
ATL3-203ENST00000538786 FZD6O60353 706 aa14.84□□□□□ -0.03
ATL3-203ENST00000538786 WISP3O95389 354 aaPredicted RBP14.84□□□□□ -0.03
ATL3-203ENST00000538786 MT-CO1P00395 513 aa14.84□□□□□ -0.03
ATL3-203ENST00000538786 LPOP22079 712 aaPredicted RBP14.84□□□□□ -0.03
ATL3-203ENST00000538786 DDX6P26196 483 aaKnown RBP eCLIP14.84□□□□□ -0.03
ATL3-203ENST00000538786 STC1P52823 247 aa14.84□□□□□ -0.03
ATL3-203ENST00000538786 CDKN2DP55273 166 aa14.84□□□□□ -0.03
ATL3-203ENST00000538786 UBE3AQ05086 875 aa14.84□□□□□ -0.03
ATL3-203ENST00000538786 CSHL1Q14406 222 aa14.84□□□□□ -0.03
ATL3-203ENST00000538786 SEMA3AQ14563 771 aa14.84□□□□□ -0.03
ATL3-203ENST00000538786 GPR158Q5T848 1215 aa14.84□□□□□ -0.03
ATL3-203ENST00000538786 KLC3Q6P597 504 aa14.84□□□□□ -0.03
ATL3-203ENST00000538786 TPGS1Q6ZTW0 290 aa14.84□□□□□ -0.03
ATL3-203ENST00000538786 METTL3Q86U44 580 aaKnown RBP14.84□□□□□ -0.03
ATL3-203ENST00000538786 SHKBP1Q8TBC3 707 aa14.84□□□□□ -0.03
ATL3-203ENST00000538786 PDCD6IPQ8WUM4 868 aaKnown RBP14.84□□□□□ -0.03
ATL3-203ENST00000538786 USP13Q92995 863 aaPredicted RBP14.84□□□□□ -0.03
ATL3-203ENST00000538786 SLC7A6OSQ96CW6 309 aaPredicted RBP14.84□□□□□ -0.03
ATL3-203ENST00000538786 RILPQ96NA2 401 aa14.84□□□□□ -0.03
ATL3-203ENST00000538786 EBF4Q9BQW3 602 aa14.84□□□□□ -0.03
ATL3-203ENST00000538786 DRC3Q9H069 523 aa14.84□□□□□ -0.03
ATL3-203ENST00000538786 INTS10Q9NVR2 710 aaKnown RBP14.84□□□□□ -0.03
ATL3-203ENST00000538786 HCFC1R1Q9NWW0 138 aa14.84□□□□□ -0.03
ATL3-203ENST00000538786 HACD3Q9P035 362 aa14.84□□□□□ -0.03
ATL3-203ENST00000538786 CRYL1Q9Y2S2 319 aa14.84□□□□□ -0.03
ATL3-203ENST00000538786 DLX3O60479 287 aa14.83□□□□□ -0.04
ATL3-203ENST00000538786 CSPG5O95196 566 aa14.83□□□□□ -0.04
ATL3-203ENST00000538786 CYBBP04839 570 aa14.83□□□□□ -0.04
ATL3-203ENST00000538786 PTPN2P17706 415 aa14.83□□□□□ -0.04
ATL3-203ENST00000538786 EN2P19622 333 aaPredicted RBP14.83□□□□□ -0.04
ATL3-203ENST00000538786 FDXRP22570 491 aa14.83□□□□□ -0.04
ATL3-203ENST00000538786 PMLP29590 882 aa14.83□□□□□ -0.04
ATL3-203ENST00000538786 SLC8A1P32418 973 aa14.83□□□□□ -0.04
ATL3-203ENST00000538786 GRIA4P48058 902 aa14.83□□□□□ -0.04
ATL3-203ENST00000538786 LMAN2Q12907 356 aa14.83□□□□□ -0.04
ATL3-203ENST00000538786 ATXN7L2Q5T6C5 722 aaPredicted RBP14.83□□□□□ -0.04
ATL3-203ENST00000538786 ZNF549Q6P9A3 640 aa14.83□□□□□ -0.04
ATL3-203ENST00000538786 MAVSQ7Z434 540 aa14.83□□□□□ -0.04
ATL3-203ENST00000538786 TTC7BQ86TV6 843 aa14.83□□□□□ -0.04
ATL3-203ENST00000538786 CMTM8Q8IZV2 173 aa14.83□□□□□ -0.04
ATL3-203ENST00000538786 SH3RF2Q8TEC5 729 aa14.83□□□□□ -0.04
ATL3-203ENST00000538786 PTCD3Q96EY7 689 aaKnown RBP14.83□□□□□ -0.04
ATL3-203ENST00000538786 PRR11Q96HE9 360 aaPredicted RBP14.83□□□□□ -0.04
ATL3-203ENST00000538786 SMG9Q9H0W8 520 aaKnown RBP14.83□□□□□ -0.04
ATL3-203ENST00000538786 ARL8BQ9NVJ2 186 aa14.83□□□□□ -0.04
ATL3-203ENST00000538786 PLK2Q9NYY3 685 aa14.83□□□□□ -0.04
ATL3-203ENST00000538786 CLEC4EQ9ULY5 219 aa14.83□□□□□ -0.04
ATL3-203ENST00000538786 CXorf51AA0A1B0GTR3 108 aa14.82□□□□□ -0.04
ATL3-203ENST00000538786 K7ERQ8 282 aa14.82□□□□□ -0.04
ATL3-203ENST00000538786 ZNF195O14628 629 aa14.82□□□□□ -0.04
ATL3-203ENST00000538786 MGRN1O60291 552 aa14.82□□□□□ -0.04
ATL3-203ENST00000538786 SERPINA6P08185 405 aa14.82□□□□□ -0.04
ATL3-203ENST00000538786 KRT16P08779 473 aa14.82□□□□□ -0.04
ATL3-203ENST00000538786 RBP1P09455 135 aa14.82□□□□□ -0.04
ATL3-203ENST00000538786 CCDC166P0CW27 439 aa14.82□□□□□ -0.04
ATL3-203ENST00000538786 ABL2P42684 1182 aa14.82□□□□□ -0.04
ATL3-203ENST00000538786 MAPK8P45983 427 aa14.82□□□□□ -0.04
ATL3-203ENST00000538786 PLK1P53350 603 aa14.82□□□□□ -0.04
ATL3-203ENST00000538786 NAGLUP54802 743 aa14.82□□□□□ -0.04
ATL3-203ENST00000538786 RCN2Q14257 317 aa14.82□□□□□ -0.04
ATL3-203ENST00000538786 ACAP2Q15057 778 aa14.82□□□□□ -0.04
ATL3-203ENST00000538786 TECRLQ5HYJ1 363 aa14.82□□□□□ -0.04
ATL3-203ENST00000538786 ZNF781Q8N8C0 355 aa14.82□□□□□ -0.04
ATL3-203ENST00000538786 MICAL1Q8TDZ2 1067 aa14.82□□□□□ -0.04
ATL3-203ENST00000538786 NSL1Q96IY1 281 aa14.82□□□□□ -0.04
ATL3-203ENST00000538786 RAB3IPQ96QF0 476 aaPredicted RBP14.82□□□□□ -0.04
ATL3-203ENST00000538786 SMIM14Q96QK8 99 aa14.82□□□□□ -0.04
ATL3-203ENST00000538786 TCF12Q99081 682 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms