RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 BTLAQ7Z6A9 289 aa18.65■□□□□ 0.58
SFSWAP-207ENST00000538548 PIGZQ86VD9 579 aa18.65■□□□□ 0.58
SFSWAP-207ENST00000538548 UPF1Q92900 1129 aaKnown RBP eCLIP18.65■□□□□ 0.58
SFSWAP-207ENST00000538548 HGH1Q9BTY7 390 aa18.65■□□□□ 0.58
SFSWAP-207ENST00000538548 SMARCAD1Q9H4L7 1026 aa18.65■□□□□ 0.58
SFSWAP-207ENST00000538548 CYP4F12Q9HCS2 524 aa18.65■□□□□ 0.58
SFSWAP-207ENST00000538548 TMPRSS4Q9NRS4 437 aa18.65■□□□□ 0.58
SFSWAP-207ENST00000538548 CMTM6Q9NX76 183 aa18.65■□□□□ 0.58
SFSWAP-207ENST00000538548 ADAMTS5Q9UNA0 930 aa18.65■□□□□ 0.58
SFSWAP-207ENST00000538548 TRAF6Q9Y4K3 522 aa18.65■□□□□ 0.58
SFSWAP-207ENST00000538548 TLL2Q9Y6L7 1015 aa18.65■□□□□ 0.58
SFSWAP-207ENST00000538548 LCTP09848 1927 aa18.64■□□□□ 0.57
SFSWAP-207ENST00000538548 EEF2KO00418 725 aaKnown RBP18.64■□□□□ 0.57
SFSWAP-207ENST00000538548 NR5A2O00482 541 aa18.64■□□□□ 0.57
SFSWAP-207ENST00000538548 B4GAT1O43505 415 aa18.64■□□□□ 0.57
SFSWAP-207ENST00000538548 SYNCRIPO60506 623 aaKnown RBP18.64■□□□□ 0.57
SFSWAP-207ENST00000538548 ELK4P28324 431 aa18.64■□□□□ 0.57
SFSWAP-207ENST00000538548 AXLP30530 894 aa18.64■□□□□ 0.57
SFSWAP-207ENST00000538548 NOS2P35228 1153 aa18.64■□□□□ 0.57
SFSWAP-207ENST00000538548 ARCN1P48444 511 aaKnown RBP18.64■□□□□ 0.57
SFSWAP-207ENST00000538548 TKTL1P51854 596 aa18.64■□□□□ 0.57
SFSWAP-207ENST00000538548 BST2Q10589 180 aaKnown RBP18.64■□□□□ 0.57
SFSWAP-207ENST00000538548 KCNJ8Q15842 424 aa18.64■□□□□ 0.57
SFSWAP-207ENST00000538548 FAM83EQ2M2I3 478 aa18.64■□□□□ 0.57
SFSWAP-207ENST00000538548 LDLRAP1Q5SW96 308 aa18.64■□□□□ 0.57
SFSWAP-207ENST00000538548 ARHGAP17Q68EM7 881 aa18.64■□□□□ 0.57
SFSWAP-207ENST00000538548 NEPROQ6NW34 567 aa18.64■□□□□ 0.57
SFSWAP-207ENST00000538548 CYHR1Q6ZMK1 362 aa18.64■□□□□ 0.57
SFSWAP-207ENST00000538548 DENND6AQ8IWF6 608 aa18.64■□□□□ 0.57
SFSWAP-207ENST00000538548 TBC1D21Q8IYX1 336 aa18.64■□□□□ 0.57
SFSWAP-207ENST00000538548 DNERQ8NFT8 737 aa18.64■□□□□ 0.57
SFSWAP-207ENST00000538548 HPS1Q92902 700 aa18.64■□□□□ 0.57
SFSWAP-207ENST00000538548 TRHDEQ9UKU6 1024 aa18.64■□□□□ 0.57
SFSWAP-207ENST00000538548 RLFQ13129 1914 aa18.64■□□□□ 0.57
SFSWAP-207ENST00000538548 A8MT66 165 aa18.64■□□□□ 0.57
SFSWAP-207ENST00000538548 FXYD1O00168 92 aa18.64■□□□□ 0.57
SFSWAP-207ENST00000538548 JRKO75564 520 aa18.64■□□□□ 0.57
SFSWAP-207ENST00000538548 ALBP02768 609 aa18.64■□□□□ 0.57
SFSWAP-207ENST00000538548 SLC6A2P23975 617 aa18.64■□□□□ 0.57
SFSWAP-207ENST00000538548 NFKBIAP25963 317 aa18.64■□□□□ 0.57
SFSWAP-207ENST00000538548 CTBP1Q13363 440 aa18.64■□□□□ 0.57
SFSWAP-207ENST00000538548 NAPEPLDQ6IQ20 393 aa18.64■□□□□ 0.57
SFSWAP-207ENST00000538548 MUC13Q9H3R2 512 aa18.64■□□□□ 0.57
SFSWAP-207ENST00000538548 FBRSL1Q9HCM7 1045 aaKnown RBP18.64■□□□□ 0.57
SFSWAP-207ENST00000538548 PRMT7Q9NVM4 692 aaPredicted RBP18.64■□□□□ 0.57
SFSWAP-207ENST00000538548 ANGPT2O15123 496 aa18.63■□□□□ 0.57
SFSWAP-207ENST00000538548 INPP4BO15327 924 aa18.63■□□□□ 0.57
SFSWAP-207ENST00000538548 NCAM2O15394 837 aa18.63■□□□□ 0.57
SFSWAP-207ENST00000538548 ALDOCP09972 364 aaKnown RBP18.63■□□□□ 0.57
SFSWAP-207ENST00000538548 NFKB1P19838 968 aa18.63■□□□□ 0.57
SFSWAP-207ENST00000538548 KCNA5P22460 613 aa18.63■□□□□ 0.57
SFSWAP-207ENST00000538548 GSTM2P28161 218 aa18.63■□□□□ 0.57
SFSWAP-207ENST00000538548 RPL34P49207 117 aaKnown RBP18.63■□□□□ 0.57
SFSWAP-207ENST00000538548 PLA2G16P53816 162 aa18.63■□□□□ 0.57
SFSWAP-207ENST00000538548 TAS2R39P59534 338 aa18.63■□□□□ 0.57
SFSWAP-207ENST00000538548 PERM1Q5SV97 790 aa18.63■□□□□ 0.57
SFSWAP-207ENST00000538548 DEFB106AQ8N104 65 aa18.63■□□□□ 0.57
SFSWAP-207ENST00000538548 PARP8Q8N3A8 854 aa18.63■□□□□ 0.57
SFSWAP-207ENST00000538548 MTMR14Q8NCE2 650 aa18.63■□□□□ 0.57
SFSWAP-207ENST00000538548 PAPD5Q8NDF8 572 aaKnown RBP18.63■□□□□ 0.57
SFSWAP-207ENST00000538548 MUS81Q96NY9 551 aa18.63■□□□□ 0.57
SFSWAP-207ENST00000538548 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.63■□□□□ 0.57
SFSWAP-207ENST00000538548 SLC27A5Q9Y2P5 690 aa18.63■□□□□ 0.57
SFSWAP-207ENST00000538548 NME7Q9Y5B8 376 aa18.63■□□□□ 0.57
SFSWAP-207ENST00000538548 ST14Q9Y5Y6 855 aa18.63■□□□□ 0.57
SFSWAP-207ENST00000538548 ATP6AP2A0A1C7CYW4 349 aa18.63■□□□□ 0.57
SFSWAP-207ENST00000538548 MTSS1O43312 755 aa18.63■□□□□ 0.57
SFSWAP-207ENST00000538548 ATP6AP2O75787 350 aa18.63■□□□□ 0.57
SFSWAP-207ENST00000538548 MT-CO1P00395 513 aa18.63■□□□□ 0.57
SFSWAP-207ENST00000538548 LDLRP01130 860 aa18.63■□□□□ 0.57
SFSWAP-207ENST00000538548 UGT2B4P06133 528 aa18.63■□□□□ 0.57
SFSWAP-207ENST00000538548 LEPRP48357 1165 aaKnown RBP18.63■□□□□ 0.57
SFSWAP-207ENST00000538548 GSSP48637 474 aa18.63■□□□□ 0.57
SFSWAP-207ENST00000538548 BCAT1P54687 386 aa18.63■□□□□ 0.57
SFSWAP-207ENST00000538548 KIF19Q2TAC6 998 aa18.63■□□□□ 0.57
SFSWAP-207ENST00000538548 TECRLQ5HYJ1 363 aa18.63■□□□□ 0.57
SFSWAP-207ENST00000538548 TFAP2DQ7Z6R9 452 aa18.63■□□□□ 0.57
SFSWAP-207ENST00000538548 C7orf31Q8N865 590 aa18.63■□□□□ 0.57
SFSWAP-207ENST00000538548 ELMO2Q96JJ3 720 aa18.63■□□□□ 0.57
SFSWAP-207ENST00000538548 ING2Q9H160 280 aa18.63■□□□□ 0.57
SFSWAP-207ENST00000538548 AKIP1Q9NQ31 210 aa18.63■□□□□ 0.57
SFSWAP-207ENST00000538548 IGSF5Q9NSI5 407 aa18.63■□□□□ 0.57
SFSWAP-207ENST00000538548 PCYT1AP49585 367 aa18.62■□□□□ 0.57
SFSWAP-207ENST00000538548 SPCS2Q15005 226 aa18.62■□□□□ 0.57
SFSWAP-207ENST00000538548 VPS26BQ4G0F5 336 aa18.62■□□□□ 0.57
SFSWAP-207ENST00000538548 LINC00299Q6ZSB3 139 aa18.62■□□□□ 0.57
SFSWAP-207ENST00000538548 RPS27LQ71UM5 84 aaKnown RBP18.62■□□□□ 0.57
SFSWAP-207ENST00000538548 C19orf60Q96EN9 201 aa18.62■□□□□ 0.57
SFSWAP-207ENST00000538548 SACM1LQ9NTJ5 587 aa18.62■□□□□ 0.57
SFSWAP-207ENST00000538548 ANAPC2Q9UJX6 822 aa18.62■□□□□ 0.57
SFSWAP-207ENST00000538548 PHIPQ8WWQ0 1821 aa18.62■□□□□ 0.57
SFSWAP-207ENST00000538548 TCRBV5S2A0A599 114 aa18.62■□□□□ 0.57
SFSWAP-207ENST00000538548 BCAS1O75363 584 aaPredicted RBP18.62■□□□□ 0.57
SFSWAP-207ENST00000538548 UMPSP11172 480 aa18.62■□□□□ 0.57
SFSWAP-207ENST00000538548 ACADSBP45954 432 aa18.62■□□□□ 0.57
SFSWAP-207ENST00000538548 RAD23AP54725 363 aa18.62■□□□□ 0.57
SFSWAP-207ENST00000538548 BACE1P56817 501 aa18.62■□□□□ 0.57
SFSWAP-207ENST00000538548 POU5F1BQ06416 359 aa18.62■□□□□ 0.57
SFSWAP-207ENST00000538548 FOXM1Q08050 763 aa18.62■□□□□ 0.57
SFSWAP-207ENST00000538548 AQP6Q13520 282 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms