RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 CCSER2Q9H7U1 834 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 RCCD1A6NED2 376 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 SAC3D1A6NKF1 404 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 SLC28A1O00337 649 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 TM7SF2O76062 418 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 CD48P09326 243 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 SERPINB10P48595 397 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 POLD2P49005 469 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 CLK1P49759 484 aaKnown RBP5.37□□□□□ -1.55
LRP6-203ENST00000538239 SOWAHAQ2M3V2 549 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 TBCELQ5QJ74 424 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 TTC33Q6PID6 262 aaPredicted RBP5.37□□□□□ -1.55
LRP6-203ENST00000538239 MON1BQ7L1V2 547 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 BEND7Q8N7W2 519 aaPredicted RBP5.37□□□□□ -1.55
LRP6-203ENST00000538239 ZNF366Q8N895 744 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 ZFP28Q8NHY6 868 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 CYP2S1Q96SQ9 504 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 TSC22D3Q99576 134 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 PRRG4Q9BZD6 226 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 GDF3Q9NR23 364 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 ATAD3AQ9NVI7 634 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 FZD10Q9ULW2 581 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 ZNF232Q9UNY5 417 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 PCDHGC5Q9Y5F6 944 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 WNT6Q9Y6F9 365 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 DUOX1Q9NRD9 1551 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 A0A0U1RQF3 1178 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 CPED1A4D0V7 1026 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 B4DGG1 531 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 CCL22O00626 93 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 MRASO14807 208 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 PPEF2O14830 753 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 SLC25A12O75746 678 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 GRIA4P48058 902 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 ILF3Q12906 894 aaKnown RBP eCLIP5.37□□□□□ -1.55
LRP6-203ENST00000538239 ALG11Q2TAA5 492 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 BBS12Q6ZW61 710 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 CELF5Q8N6W0 485 aaKnown RBP5.37□□□□□ -1.55
LRP6-203ENST00000538239 POU5F2Q8N7G0 328 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 SPATA22Q8NHS9 363 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 HEXDCQ8WVB3 486 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 TIFAQ96CG3 184 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 SUSD3Q96L08 255 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 ADI1Q9BV57 179 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 ZSCAN32Q9NX65 697 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 MYH2Q9UKX2 1941 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 LRRC14BA6NHZ5 514 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 YJEFN3A6XGL0 299 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 E7ENQ6 273 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 H3BN98 237 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 LRIG2O94898 1065 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 VAV1P15498 845 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 PSMA3P25788 255 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 S100A5P33763 92 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 PTPN9P43378 593 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 RPL14P50914 215 aaKnown RBP5.37□□□□□ -1.55
LRP6-203ENST00000538239 NEK3P51956 506 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 ZBTB17Q13105 803 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 SEMA5AQ13591 1074 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 FAM98BQ52LJ0 330 aaKnown RBP5.37□□□□□ -1.55
LRP6-203ENST00000538239 TEX44Q53QW1 395 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 RNF19BQ6ZMZ0 732 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 C17orf64Q86WR6 236 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 CREG2Q8IUH2 290 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 RNF148Q8N7C7 305 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 OR4A15Q8NGL6 344 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 ASZ1Q8WWH4 475 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 JSRP1Q96MG2 331 aaPredicted RBP5.37□□□□□ -1.55
LRP6-203ENST00000538239 YIPF3Q9GZM5 350 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 GPR88Q9GZN0 384 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 ZC4H2Q9NQZ6 224 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 DUSP12Q9UNI6 340 aa5.37□□□□□ -1.55
LRP6-203ENST00000538239 TTC24A2A3L6 582 aaPredicted RBP5.36□□□□□ -1.55
LRP6-203ENST00000538239 VNN1O95497 513 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 PRAMEF1O95521 474 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 MLYCDO95822 493 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 SHBGP04278 402 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 ANXA6P08133 673 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 TCEA1P23193 301 aaKnown RBP5.36□□□□□ -1.55
LRP6-203ENST00000538239 CDK7P50613 346 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 CACNG1Q06432 222 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 RUNX1T1Q06455 604 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 RCN1Q15293 331 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 XKR4Q5GH76 650 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 ENPP7Q6UWV6 458 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 SLC39A5Q6ZMH5 540 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 GPRIN3Q6ZVF9 776 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 APTXQ7Z2E3 356 aaKnown RBP5.36□□□□□ -1.55
LRP6-203ENST00000538239 TRIM69Q86WT6 500 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 FAM20CQ8IXL6 584 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 MCCC1Q96RQ3 725 aaPredicted RBP5.36□□□□□ -1.55
LRP6-203ENST00000538239 ROGDIQ9GZN7 287 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 VPS45Q9NRW7 570 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 PCDHGC3Q9UN70 934 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 HSMCR30P0CW71 290 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 CALB2P22676 271 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 MMP8P22894 467 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 RALGDSQ12967 914 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 ITIH4Q14624 930 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 KYAT3Q6YP21 454 aaKnown RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms