RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 SPECC1L-ADORA2AF8WAN1 911 aa10.79□□□□□ -0.68
CLIP1-210ENST00000538120 AURKAO14965 403 aa10.79□□□□□ -0.68
CLIP1-210ENST00000538120 LILRB3O75022 631 aa10.79□□□□□ -0.68
CLIP1-210ENST00000538120 SBK3P0C264 359 aa10.79□□□□□ -0.68
CLIP1-210ENST00000538120 CPA3P15088 417 aa10.79□□□□□ -0.68
CLIP1-210ENST00000538120 GLDCP23378 1020 aa10.79□□□□□ -0.68
CLIP1-210ENST00000538120 HADHAP40939 763 aa10.79□□□□□ -0.68
CLIP1-210ENST00000538120 ALDH1A3P47895 512 aa10.79□□□□□ -0.68
CLIP1-210ENST00000538120 BTG3Q14201 252 aaPredicted RBP10.79□□□□□ -0.68
CLIP1-210ENST00000538120 CCDC153Q494R4 210 aa10.79□□□□□ -0.68
CLIP1-210ENST00000538120 ARMC3Q5W041 872 aa10.79□□□□□ -0.68
CLIP1-210ENST00000538120 ALG1LQ6GMV1 187 aa10.79□□□□□ -0.68
CLIP1-210ENST00000538120 DNAJB7Q7Z6W7 309 aaPredicted RBP10.79□□□□□ -0.68
CLIP1-210ENST00000538120 SLC41A1Q8IVJ1 513 aa10.79□□□□□ -0.68
CLIP1-210ENST00000538120 CMTR2Q8IYT2 770 aaKnown RBP10.79□□□□□ -0.68
CLIP1-210ENST00000538120 OR13J1Q8NGT2 312 aa10.79□□□□□ -0.68
CLIP1-210ENST00000538120 ZFAND2BQ8WV99 257 aa10.79□□□□□ -0.68
CLIP1-210ENST00000538120 PYDC1Q8WXC3 89 aa10.79□□□□□ -0.68
CLIP1-210ENST00000538120 ZNF599Q96NL3 588 aa10.79□□□□□ -0.68
CLIP1-210ENST00000538120 GBP5Q96PP8 586 aa10.79□□□□□ -0.68
CLIP1-210ENST00000538120 SHCBP1LQ9BZQ2 653 aa10.79□□□□□ -0.68
CLIP1-210ENST00000538120 MUC3BQ9H195 1237 aa10.79□□□□□ -0.68
CLIP1-210ENST00000538120 EBF3Q9H4W6 596 aa10.79□□□□□ -0.68
CLIP1-210ENST00000538120 RETREG1Q9H6L5 497 aa10.79□□□□□ -0.68
CLIP1-210ENST00000538120 ZNF334Q9HCZ1 680 aaPredicted RBP10.79□□□□□ -0.68
CLIP1-210ENST00000538120 ANGPTL2Q9UKU9 493 aa10.79□□□□□ -0.68
CLIP1-210ENST00000538120 A0A088AWK7 358 aa10.79□□□□□ -0.68
CLIP1-210ENST00000538120 PHGDHO43175 533 aaKnown RBP10.79□□□□□ -0.68
CLIP1-210ENST00000538120 BUD23O43709 281 aaKnown RBP10.79□□□□□ -0.68
CLIP1-210ENST00000538120 PAPSS2O95340 614 aaPredicted RBP10.79□□□□□ -0.68
CLIP1-210ENST00000538120 TIMP1P01033 207 aa10.79□□□□□ -0.68
CLIP1-210ENST00000538120 SERPINE1P05121 402 aa10.79□□□□□ -0.68
CLIP1-210ENST00000538120 SLC35E2BP0CK96 405 aa10.79□□□□□ -0.68
CLIP1-210ENST00000538120 IRF1P10914 325 aa10.79□□□□□ -0.68
CLIP1-210ENST00000538120 LAG3P18627 525 aa10.79□□□□□ -0.68
CLIP1-210ENST00000538120 SLC1A6P48664 564 aa10.79□□□□□ -0.68
CLIP1-210ENST00000538120 CDK18Q07002 472 aa10.79□□□□□ -0.68
CLIP1-210ENST00000538120 USP10Q14694 798 aaKnown RBP10.79□□□□□ -0.68
CLIP1-210ENST00000538120 ZNF789Q5FWF6 425 aa10.79□□□□□ -0.68
CLIP1-210ENST00000538120 RALGPS1Q5JS13 557 aa10.79□□□□□ -0.68
CLIP1-210ENST00000538120 NEPROQ6NW34 567 aa10.79□□□□□ -0.68
CLIP1-210ENST00000538120 CRLF3Q8IUI8 442 aa10.79□□□□□ -0.68
CLIP1-210ENST00000538120 CEP97Q8IW35 865 aa10.79□□□□□ -0.68
CLIP1-210ENST00000538120 PNPLA1Q8N8W4 532 aa10.79□□□□□ -0.68
CLIP1-210ENST00000538120 PAWRQ96IZ0 340 aaKnown RBP10.79□□□□□ -0.68
CLIP1-210ENST00000538120 SLC22A12Q96S37 553 aa10.79□□□□□ -0.68
CLIP1-210ENST00000538120 SORT1Q99523 831 aa10.79□□□□□ -0.68
CLIP1-210ENST00000538120 POLR1EQ9GZS1 481 aaKnown RBP10.79□□□□□ -0.68
CLIP1-210ENST00000538120 WWP1Q9H0M0 922 aa10.79□□□□□ -0.68
CLIP1-210ENST00000538120 CUEDC1Q9NWM3 386 aaPredicted RBP10.79□□□□□ -0.68
CLIP1-210ENST00000538120 NDE1Q9NXR1 346 aa10.79□□□□□ -0.68
CLIP1-210ENST00000538120 KCTD3Q9Y597 815 aa10.79□□□□□ -0.68
CLIP1-210ENST00000538120 BPTFQ12830 3046 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.78□□□□□ -0.68
CLIP1-210ENST00000538120 KDELR3O43731 214 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 GREM1O60565 184 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 TSPAN3O60637 253 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 CLDN11O75508 207 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 F11P03951 625 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 ACRP10323 421 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 ETS2P15036 469 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 PAMP19021 973 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 CRABP2P29373 138 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 GSTT1P30711 240 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 CPOXP36551 454 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 AVPR1AP37288 418 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 RGRP47804 291 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 ARSDP51689 593 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 UGP2Q16851 508 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 TRMT5Q32P41 509 aaKnown RBP10.78□□□□□ -0.68
CLIP1-210ENST00000538120 RABGAP1LQ5R372 815 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 ADGRF1Q5T601 910 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 ZNF470Q6ECI4 717 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 TCEAL8Q8IYN2 117 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 ADAMTS19Q8TE59 1207 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 CYP2S1Q96SQ9 504 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 ACE2Q9BYF1 805 aaPredicted RBP10.78□□□□□ -0.68
CLIP1-210ENST00000538120 SUN2Q9UH99 717 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 STOML2Q9UJZ1 356 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 FBXO5Q9UKT4 447 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 FAM95CA0A1B0GW59 222 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 TEX28O15482 410 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 LDB2O43679 373 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 CIB2O75838 187 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 S100BP04271 92 aaPredicted RBP10.78□□□□□ -0.68
CLIP1-210ENST00000538120 URODP06132 367 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 RALBP11234 206 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 SAT1P21673 171 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 VAMP1P23763 118 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 POLD2P49005 469 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 AP2B1P63010 937 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 ZXDBP98169 803 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 DLG1Q12959 904 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 PEX6Q13608 980 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 ITGA9Q13797 1035 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 ZNF235Q14590 738 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 ZNF460Q14592 562 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 CNPY1Q3B7I2 92 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 LPCAT4Q643R3 524 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 IL31Q6EBC2 164 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms