RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 UBP1Q9NZI7 540 aa7.17□□□□□ -1.26
YBX3-206ENST00000536823 AIPL1Q9NZN9 384 aa7.17□□□□□ -1.26
YBX3-206ENST00000536823 SARDHQ9UL12 918 aa7.17□□□□□ -1.26
YBX3-206ENST00000536823 CHD6Q8TD26 2715 aa7.17□□□□□ -1.26
YBX3-206ENST00000536823 PLXNA2O75051 1894 aa7.17□□□□□ -1.26
YBX3-206ENST00000536823 TP53BP1Q12888 1972 aaPredicted RBP7.17□□□□□ -1.26
YBX3-206ENST00000536823 DMXL2Q8TDJ6 3036 aa7.17□□□□□ -1.26
YBX3-206ENST00000536823 TRPM6Q9BX84 2022 aa7.17□□□□□ -1.26
YBX3-206ENST00000536823 CXorf51AA0A1B0GTR3 108 aa7.16□□□□□ -1.26
YBX3-206ENST00000536823 A0A1W2PPC4 97 aa7.16□□□□□ -1.26
YBX3-206ENST00000536823 A0A1W2PQJ5 194 aa7.16□□□□□ -1.26
YBX3-206ENST00000536823 K7ERQ8 282 aa7.16□□□□□ -1.26
YBX3-206ENST00000536823 CBX4O00257 560 aa7.16□□□□□ -1.26
YBX3-206ENST00000536823 PLK4O00444 970 aa7.16□□□□□ -1.26
YBX3-206ENST00000536823 DDX3XO00571 662 aaKnown RBP eCLIP7.16□□□□□ -1.26
YBX3-206ENST00000536823 SLC7A4O43246 635 aa7.16□□□□□ -1.26
YBX3-206ENST00000536823 SMAD6O43541 496 aaKnown RBP7.16□□□□□ -1.26
YBX3-206ENST00000536823 LATO43561 262 aa7.16□□□□□ -1.26
YBX3-206ENST00000536823 PLRG1O43660 514 aaKnown RBP7.16□□□□□ -1.26
YBX3-206ENST00000536823 RTN2O75298 545 aa7.16□□□□□ -1.26
YBX3-206ENST00000536823 GZMAP12544 262 aa7.16□□□□□ -1.26
YBX3-206ENST00000536823 DESP17661 470 aa7.16□□□□□ -1.26
YBX3-206ENST00000536823 L1CAMP32004 1257 aa7.16□□□□□ -1.26
YBX3-206ENST00000536823 ACVRL1P37023 503 aa7.16□□□□□ -1.26
YBX3-206ENST00000536823 CSNK1EP49674 416 aaKnown RBP7.16□□□□□ -1.26
YBX3-206ENST00000536823 SERPINH1P50454 418 aaKnown RBP7.16□□□□□ -1.26
YBX3-206ENST00000536823 AIF1P55008 147 aa7.16□□□□□ -1.26
YBX3-206ENST00000536823 RPL7AP62424 266 aaKnown RBP7.16□□□□□ -1.26
YBX3-206ENST00000536823 PPP2CBP62714 309 aa7.16□□□□□ -1.26
YBX3-206ENST00000536823 PPP2CAP67775 309 aa7.16□□□□□ -1.26
YBX3-206ENST00000536823 SHC2P98077 582 aa7.16□□□□□ -1.26
YBX3-206ENST00000536823 SLC20A2Q08357 652 aa7.16□□□□□ -1.26
YBX3-206ENST00000536823 CNTN1Q12860 1018 aa7.16□□□□□ -1.26
YBX3-206ENST00000536823 NR1I3Q14994 352 aa7.16□□□□□ -1.26
YBX3-206ENST00000536823 ZSCAN23Q3MJ62 389 aa7.16□□□□□ -1.26
YBX3-206ENST00000536823 POM121L1PQ3SYA9 428 aa7.16□□□□□ -1.26
YBX3-206ENST00000536823 AGBL4Q5VU57 503 aa7.16□□□□□ -1.26
YBX3-206ENST00000536823 SFMBT2Q5VUG0 894 aa7.16□□□□□ -1.26
YBX3-206ENST00000536823 PLEKHA7Q6IQ23 1121 aa7.16□□□□□ -1.26
YBX3-206ENST00000536823 RETSATQ6NUM9 610 aa7.16□□□□□ -1.26
YBX3-206ENST00000536823 RWDD4Q6NW29 188 aaKnown RBP7.16□□□□□ -1.26
YBX3-206ENST00000536823 DCUN1D2Q6PH85 259 aa7.16□□□□□ -1.26
YBX3-206ENST00000536823 IL27RAQ6UWB1 636 aa7.16□□□□□ -1.26
YBX3-206ENST00000536823 LAYNQ6UX15 382 aa7.16□□□□□ -1.26
YBX3-206ENST00000536823 TMC6Q7Z403 805 aa7.16□□□□□ -1.26
YBX3-206ENST00000536823 SLFN11Q7Z7L1 901 aa7.16□□□□□ -1.26
YBX3-206ENST00000536823 PCDH20Q8N6Y1 951 aaKnown RBP7.16□□□□□ -1.26
YBX3-206ENST00000536823 OR2A12Q8NGT7 310 aa7.16□□□□□ -1.26
YBX3-206ENST00000536823 OR14C36Q8NHC7 312 aa7.16□□□□□ -1.26
YBX3-206ENST00000536823 ACE2Q9BYF1 805 aaPredicted RBP7.16□□□□□ -1.26
YBX3-206ENST00000536823 MAGEH1Q9H213 219 aa7.16□□□□□ -1.26
YBX3-206ENST00000536823 SLC32A1Q9H598 525 aa7.16□□□□□ -1.26
YBX3-206ENST00000536823 HAUS4Q9H6D7 363 aa7.16□□□□□ -1.26
YBX3-206ENST00000536823 GAREM1Q9H706 876 aa7.16□□□□□ -1.26
YBX3-206ENST00000536823 PREBQ9HCU5 417 aa7.16□□□□□ -1.26
YBX3-206ENST00000536823 ANGPTL2Q9UKU9 493 aa7.16□□□□□ -1.26
YBX3-206ENST00000536823 ADAMTS20P59510 1910 aa7.16□□□□□ -1.26
YBX3-206ENST00000536823 FAM208BQ5VWN6 2430 aa7.16□□□□□ -1.26
YBX3-206ENST00000536823 TMEM131Q92545 1883 aa7.15□□□□□ -1.26
YBX3-206ENST00000536823 DSPP15924 2871 aaKnown RBP7.15□□□□□ -1.26
YBX3-206ENST00000536823 A0A1W2PR77 199 aa7.15□□□□□ -1.26
YBX3-206ENST00000536823 ZSCAN5CA6NGD5 496 aaPredicted RBP7.15□□□□□ -1.26
YBX3-206ENST00000536823 TMCO5BA8MYB1 307 aa7.15□□□□□ -1.26
YBX3-206ENST00000536823 GOLGA6L19H0YKK7 550 aa7.15□□□□□ -1.26
YBX3-206ENST00000536823 KPNA3O00505 521 aaPredicted RBP7.15□□□□□ -1.26
YBX3-206ENST00000536823 VILLO15195 856 aa7.15□□□□□ -1.26
YBX3-206ENST00000536823 RAMP2O60895 175 aa7.15□□□□□ -1.26
YBX3-206ENST00000536823 ZNF821O75541 412 aaPredicted RBP7.15□□□□□ -1.26
YBX3-206ENST00000536823 CD160O95971 181 aa7.15□□□□□ -1.26
YBX3-206ENST00000536823 FTLP02792 175 aaPredicted RBP7.15□□□□□ -1.26
YBX3-206ENST00000536823 CTSLP07711 333 aa7.15□□□□□ -1.26
YBX3-206ENST00000536823 EPHB2P29323 1055 aa7.15□□□□□ -1.26
YBX3-206ENST00000536823 CHRNA3P32297 505 aa7.15□□□□□ -1.26
YBX3-206ENST00000536823 HTR7P34969 479 aa7.15□□□□□ -1.26
YBX3-206ENST00000536823 NUDT1P36639 197 aa7.15□□□□□ -1.26
YBX3-206ENST00000536823 CTSKP43235 329 aa7.15□□□□□ -1.26
YBX3-206ENST00000536823 RECQLP46063 649 aaPredicted RBP7.15□□□□□ -1.26
YBX3-206ENST00000536823 UBASH3AP57075 661 aa7.15□□□□□ -1.26
YBX3-206ENST00000536823 GEMIN4P57678 1058 aaKnown RBP7.15□□□□□ -1.26
YBX3-206ENST00000536823 ARF5P84085 180 aa7.15□□□□□ -1.26
YBX3-206ENST00000536823 OGDHQ02218 1023 aa7.15□□□□□ -1.26
YBX3-206ENST00000536823 MAMLD1Q13495 774 aa7.15□□□□□ -1.26
YBX3-206ENST00000536823 HNRNPDQ14103 355 aaKnown RBP7.15□□□□□ -1.26
YBX3-206ENST00000536823 KIF19Q2TAC6 998 aa7.15□□□□□ -1.26
YBX3-206ENST00000536823 HLA-BQ31612 363 aa7.15□□□□□ -1.26
YBX3-206ENST00000536823 TDRD12Q587J7 1177 aaKnown RBP7.15□□□□□ -1.26
YBX3-206ENST00000536823 PIP5KL1Q5T9C9 394 aa7.15□□□□□ -1.26
YBX3-206ENST00000536823 SCYL2Q6P3W7 929 aa7.15□□□□□ -1.26
YBX3-206ENST00000536823 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.15□□□□□ -1.26
YBX3-206ENST00000536823 DPY19L3Q6ZPD9 716 aa7.15□□□□□ -1.26
YBX3-206ENST00000536823 REC114Q7Z4M0 266 aa7.15□□□□□ -1.26
YBX3-206ENST00000536823 ADAT2Q7Z6V5 191 aaKnown RBP7.15□□□□□ -1.26
YBX3-206ENST00000536823 TRIM69Q86WT6 500 aa7.15□□□□□ -1.26
YBX3-206ENST00000536823 DNAAF5Q86Y56 855 aa7.15□□□□□ -1.26
YBX3-206ENST00000536823 NAXDQ8IW45 347 aa7.15□□□□□ -1.26
YBX3-206ENST00000536823 PYROXD2Q8N2H3 581 aa7.15□□□□□ -1.26
YBX3-206ENST00000536823 RTL3Q8N8U3 475 aaKnown RBP7.15□□□□□ -1.26
YBX3-206ENST00000536823 CHST14Q8NCH0 376 aa7.15□□□□□ -1.26
YBX3-206ENST00000536823 TMIEQ8NEW7 156 aa7.15□□□□□ -1.26
YBX3-206ENST00000536823 ABHD4Q8TB40 342 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms