RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 CPP00450 1065 aa13.17□□□□□ -0.3
RTN3-207ENST00000536011 PRKCGP05129 697 aa13.17□□□□□ -0.3
RTN3-207ENST00000536011 SERPING1P05155 500 aa13.17□□□□□ -0.3
RTN3-207ENST00000536011 SKILP12757 684 aa13.17□□□□□ -0.3
RTN3-207ENST00000536011 RALGDSQ12967 914 aa13.17□□□□□ -0.3
RTN3-207ENST00000536011 EIF3IQ13347 325 aaKnown RBP13.17□□□□□ -0.3
RTN3-207ENST00000536011 ACOX1Q15067 660 aa13.17□□□□□ -0.3
RTN3-207ENST00000536011 SMTNL2Q2TAL5 461 aa13.17□□□□□ -0.3
RTN3-207ENST00000536011 PERM1Q5SV97 790 aa13.17□□□□□ -0.3
RTN3-207ENST00000536011 CRTC1Q6UUV9 634 aa13.17□□□□□ -0.3
RTN3-207ENST00000536011 ARHGAP36Q6ZRI8 547 aa13.17□□□□□ -0.3
RTN3-207ENST00000536011 POLNQ7Z5Q5 900 aa13.17□□□□□ -0.3
RTN3-207ENST00000536011 LRRC49Q8IUZ0 686 aa13.17□□□□□ -0.3
RTN3-207ENST00000536011 NIPA2Q8N8Q9 360 aa13.17□□□□□ -0.3
RTN3-207ENST00000536011 KYQ8NBH2 561 aa13.17□□□□□ -0.3
RTN3-207ENST00000536011 PDXPQ96GD0 296 aa13.17□□□□□ -0.3
RTN3-207ENST00000536011 CSPG4P5Q96PW8 444 aa13.17□□□□□ -0.3
RTN3-207ENST00000536011 GFM1Q96RP9 751 aaKnown RBP13.17□□□□□ -0.3
RTN3-207ENST00000536011 NUDCD1Q96RS6 583 aa13.17□□□□□ -0.3
RTN3-207ENST00000536011 STRADBQ9C0K7 418 aa13.17□□□□□ -0.3
RTN3-207ENST00000536011 ASCL3Q9NQ33 180 aa13.17□□□□□ -0.3
RTN3-207ENST00000536011 RCOR3Q9P2K3 495 aaPredicted RBP13.17□□□□□ -0.3
RTN3-207ENST00000536011 ANAPC7Q9UJX3 599 aa13.17□□□□□ -0.3
RTN3-207ENST00000536011 ENTPD2Q9Y5L3 495 aa13.17□□□□□ -0.3
RTN3-207ENST00000536011 ASXL3Q9C0F0 2248 aa13.16□□□□□ -0.3
RTN3-207ENST00000536011 ANKRD36A6QL64 1941 aa13.16□□□□□ -0.3
RTN3-207ENST00000536011 ATXN7O15265 892 aaPredicted RBP13.16□□□□□ -0.3
RTN3-207ENST00000536011 TPM3P06753 285 aa13.16□□□□□ -0.3
RTN3-207ENST00000536011 CELA2BP08218 269 aaPredicted RBP13.16□□□□□ -0.3
RTN3-207ENST00000536011 CYP2A6P11509 494 aaPredicted RBP13.16□□□□□ -0.3
RTN3-207ENST00000536011 CXADRP78310 365 aa13.16□□□□□ -0.3
RTN3-207ENST00000536011 ZBED6P86452 979 aa13.16□□□□□ -0.3
RTN3-207ENST00000536011 SLC10A7Q0GE19 358 aa13.16□□□□□ -0.3
RTN3-207ENST00000536011 PEX6Q13608 980 aa13.16□□□□□ -0.3
RTN3-207ENST00000536011 KRT81Q14533 505 aa13.16□□□□□ -0.3
RTN3-207ENST00000536011 IQCB1Q15051 598 aa13.16□□□□□ -0.3
RTN3-207ENST00000536011 HADHQ16836 314 aaKnown RBP13.16□□□□□ -0.3
RTN3-207ENST00000536011 MARC1Q5VT66 337 aa13.16□□□□□ -0.3
RTN3-207ENST00000536011 USP45Q70EL2 814 aa13.16□□□□□ -0.3
RTN3-207ENST00000536011 TAF8Q7Z7C8 310 aa13.16□□□□□ -0.3
RTN3-207ENST00000536011 NDUFAF2Q8N183 169 aa13.16□□□□□ -0.3
RTN3-207ENST00000536011 KIAA1524Q8TCG1 905 aa13.16□□□□□ -0.3
RTN3-207ENST00000536011 PDCD6IPQ8WUM4 868 aaKnown RBP13.16□□□□□ -0.3
RTN3-207ENST00000536011 FUBP1Q96AE4 644 aaKnown RBP13.16□□□□□ -0.3
RTN3-207ENST00000536011 CCDC74AQ96AQ1 378 aa13.16□□□□□ -0.3
RTN3-207ENST00000536011 NUS1Q96E22 293 aa13.16□□□□□ -0.3
RTN3-207ENST00000536011 LIN37Q96GY3 246 aaPredicted RBP13.16□□□□□ -0.3
RTN3-207ENST00000536011 NAF1Q96HR8 494 aaKnown RBP13.16□□□□□ -0.3
RTN3-207ENST00000536011 TMEM74Q96NL1 305 aa13.16□□□□□ -0.3
RTN3-207ENST00000536011 SLC46A1Q96NT5 459 aa13.16□□□□□ -0.3
RTN3-207ENST00000536011 MGME1Q9BQP7 344 aa13.16□□□□□ -0.3
RTN3-207ENST00000536011 PHPT1Q9NRX4 125 aaPredicted RBP13.16□□□□□ -0.3
RTN3-207ENST00000536011 B4GALT6Q9UBX8 382 aa13.16□□□□□ -0.3
RTN3-207ENST00000536011 RAI2Q9Y5P3 530 aa13.16□□□□□ -0.3
RTN3-207ENST00000536011 LRRK1Q38SD2 2015 aa13.16□□□□□ -0.3
RTN3-207ENST00000536011 D6RAR5 112 aa13.15□□□□□ -0.3
RTN3-207ENST00000536011 MYO1FO00160 1098 aa13.15□□□□□ -0.3
RTN3-207ENST00000536011 PSMD11O00231 422 aa13.15□□□□□ -0.3
RTN3-207ENST00000536011 NTN3O00634 580 aaPredicted RBP13.15□□□□□ -0.3
RTN3-207ENST00000536011 KLK10O43240 276 aa13.15□□□□□ -0.3
RTN3-207ENST00000536011 ZW10O43264 779 aa13.15□□□□□ -0.3
RTN3-207ENST00000536011 HTRA2O43464 458 aaPredicted RBP13.15□□□□□ -0.3
RTN3-207ENST00000536011 MAFKO60675 156 aa13.15□□□□□ -0.3
RTN3-207ENST00000536011 ITGA2BP08514 1039 aa13.15□□□□□ -0.3
RTN3-207ENST00000536011 RARAP10276 462 aa13.15□□□□□ -0.3
RTN3-207ENST00000536011 MYCLP1P12525 358 aaPredicted RBP13.15□□□□□ -0.3
RTN3-207ENST00000536011 AMPD1P23109 780 aa13.15□□□□□ -0.3
RTN3-207ENST00000536011 IL1R2P27930 398 aa13.15□□□□□ -0.3
RTN3-207ENST00000536011 VIPR1P32241 457 aa13.15□□□□□ -0.3
RTN3-207ENST00000536011 TRIM23P36406 574 aa13.15□□□□□ -0.3
RTN3-207ENST00000536011 MMP13P45452 471 aa13.15□□□□□ -0.3
RTN3-207ENST00000536011 UBASH3AP57075 661 aa13.15□□□□□ -0.3
RTN3-207ENST00000536011 FANCCQ00597 558 aa13.15□□□□□ -0.3
RTN3-207ENST00000536011 ARHGEF7Q14155 803 aa13.15□□□□□ -0.3
RTN3-207ENST00000536011 PNCKQ6P2M8 343 aa13.15□□□□□ -0.3
RTN3-207ENST00000536011 PLA2G15Q8NCC3 412 aa13.15□□□□□ -0.3
RTN3-207ENST00000536011 FAM46DQ8NEK8 389 aa13.15□□□□□ -0.3
RTN3-207ENST00000536011 OR1E3Q8WZA6 343 aa13.15□□□□□ -0.3
RTN3-207ENST00000536011 BBC3Q96PG8 261 aaPredicted RBP13.15□□□□□ -0.3
RTN3-207ENST00000536011 NUP85Q9BW27 656 aa13.15□□□□□ -0.3
RTN3-207ENST00000536011 THAP2Q9H0W7 228 aa13.15□□□□□ -0.3
RTN3-207ENST00000536011 PCDH18Q9HCL0 1135 aa13.15□□□□□ -0.3
RTN3-207ENST00000536011 FGF22Q9HCT0 170 aa13.15□□□□□ -0.3
RTN3-207ENST00000536011 LCMT1Q9UIC8 334 aa13.15□□□□□ -0.3
RTN3-207ENST00000536011 PHTF1Q9UMS5 762 aa13.15□□□□□ -0.3
RTN3-207ENST00000536011 LUC7L2Q9Y383 392 aaKnown RBP13.15□□□□□ -0.3
RTN3-207ENST00000536011 LRP4O75096 1905 aa13.15□□□□□ -0.3
RTN3-207ENST00000536011 RP1P56715 2156 aa13.14□□□□□ -0.31
RTN3-207ENST00000536011 PRSS38A1L453 326 aa13.14□□□□□ -0.31
RTN3-207ENST00000536011 TMEM202A6NGA9 273 aa13.14□□□□□ -0.31
RTN3-207ENST00000536011 CAPN8A6NHC0 703 aa13.14□□□□□ -0.31
RTN3-207ENST00000536011 CYP1A2P05177 515 aa13.14□□□□□ -0.31
RTN3-207ENST00000536011 RPLP0P05388 317 aaKnown RBP13.14□□□□□ -0.31
RTN3-207ENST00000536011 PNLIPP16233 465 aa13.14□□□□□ -0.31
RTN3-207ENST00000536011 GLB1P16278 677 aa13.14□□□□□ -0.31
RTN3-207ENST00000536011 CR2P20023 1033 aa13.14□□□□□ -0.31
RTN3-207ENST00000536011 CA4P22748 312 aa13.14□□□□□ -0.31
RTN3-207ENST00000536011 SSR1P43307 286 aaKnown RBP13.14□□□□□ -0.31
RTN3-207ENST00000536011 INHBCP55103 352 aa13.14□□□□□ -0.31
RTN3-207ENST00000536011 RHDQ02161 417 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms