RNA–Protein interactions for RNA: ENST00000535601.5

HTATSF1-204, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 3,019 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-204ENST00000535601 MARK4Q96L34 752 aa18.33■□□□□ 0.52
HTATSF1-204ENST00000535601 TDRD1Q9BXT4 1180 aaKnown RBP18.33■□□□□ 0.52
HTATSF1-204ENST00000535601 SLC46A2Q9BY10 475 aa18.33■□□□□ 0.52
HTATSF1-204ENST00000535601 IGSF5Q9NSI5 407 aa18.33■□□□□ 0.52
HTATSF1-204ENST00000535601 FAM50BQ9Y247 325 aa18.33■□□□□ 0.52
HTATSF1-204ENST00000535601 TRIOO75962 3097 aa18.32■□□□□ 0.52
HTATSF1-204ENST00000535601 PER2O15055 1255 aa18.32■□□□□ 0.52
HTATSF1-204ENST00000535601 FGF1P05230 155 aa18.32■□□□□ 0.52
HTATSF1-204ENST00000535601 CD70P32970 193 aa18.32■□□□□ 0.52
HTATSF1-204ENST00000535601 ARL13AQ5H913 290 aaPredicted RBP18.32■□□□□ 0.52
HTATSF1-204ENST00000535601 TMC8Q8IU68 726 aa18.32■□□□□ 0.52
HTATSF1-204ENST00000535601 HERC6Q8IVU3 1022 aa18.32■□□□□ 0.52
HTATSF1-204ENST00000535601 WDR75Q8IWA0 830 aaKnown RBP18.32■□□□□ 0.52
HTATSF1-204ENST00000535601 TDRD5Q8NAT2 981 aaKnown RBP18.32■□□□□ 0.52
HTATSF1-204ENST00000535601 ZNF398Q8TD17 642 aa18.32■□□□□ 0.52
HTATSF1-204ENST00000535601 MRPS31Q92665 395 aaKnown RBP18.32■□□□□ 0.52
HTATSF1-204ENST00000535601 ALG9Q9H6U8 611 aa18.32■□□□□ 0.52
HTATSF1-204ENST00000535601 NSMCE4AQ9NXX6 385 aa18.32■□□□□ 0.52
HTATSF1-204ENST00000535601 TRIM24O15164 1050 aa18.32■□□□□ 0.52
HTATSF1-204ENST00000535601 LUC7L3O95232 432 aaKnown RBP18.32■□□□□ 0.52
HTATSF1-204ENST00000535601 NCF2P19878 526 aaPredicted RBP18.32■□□□□ 0.52
HTATSF1-204ENST00000535601 IDH3AP50213 366 aa18.32■□□□□ 0.52
HTATSF1-204ENST00000535601 RHOAP61586 193 aa18.32■□□□□ 0.52
HTATSF1-204ENST00000535601 BBS5Q8N3I7 341 aa18.32■□□□□ 0.52
HTATSF1-204ENST00000535601 FATE1Q969F0 183 aa18.32■□□□□ 0.52
HTATSF1-204ENST00000535601 PTCD3Q96EY7 689 aaKnown RBP18.32■□□□□ 0.52
HTATSF1-204ENST00000535601 PPP1R2P1Q96PQ5 205 aa18.32■□□□□ 0.52
HTATSF1-204ENST00000535601 C17orf80Q9BSJ5 609 aa18.32■□□□□ 0.52
HTATSF1-204ENST00000535601 COG4Q9H9E3 785 aa18.32■□□□□ 0.52
HTATSF1-204ENST00000535601 IL23AQ9NPF7 189 aa18.32■□□□□ 0.52
HTATSF1-204ENST00000535601 FKBPLQ9UIM3 349 aa18.32■□□□□ 0.52
HTATSF1-204ENST00000535601 OR1I1O60431 355 aa18.31■□□□□ 0.52
HTATSF1-204ENST00000535601 ATP6V1G2O95670 118 aa18.31■□□□□ 0.52
HTATSF1-204ENST00000535601 GLP2RO95838 553 aa18.31■□□□□ 0.52
HTATSF1-204ENST00000535601 HLA-DPA1P20036 260 aa18.31■□□□□ 0.52
HTATSF1-204ENST00000535601 CTNNB1P35222 781 aa18.31■□□□□ 0.52
HTATSF1-204ENST00000535601 LEPRP48357 1165 aaKnown RBP18.31■□□□□ 0.52
HTATSF1-204ENST00000535601 TUBB3Q13509 450 aa18.31■□□□□ 0.52
HTATSF1-204ENST00000535601 LRRC73Q5JTD7 316 aa18.31■□□□□ 0.52
HTATSF1-204ENST00000535601 BRSK1Q8TDC3 778 aa18.31■□□□□ 0.52
HTATSF1-204ENST00000535601 CDKN2AIPNLQ96HQ2 116 aa18.31■□□□□ 0.52
HTATSF1-204ENST00000535601 WWP1Q9H0M0 922 aa18.31■□□□□ 0.52
HTATSF1-204ENST00000535601 GALPQ9UBC7 116 aa18.31■□□□□ 0.52
HTATSF1-204ENST00000535601 EVLQ9UI08 416 aaPredicted RBP18.31■□□□□ 0.52
HTATSF1-204ENST00000535601 ZDHHC2Q9UIJ5 367 aa18.31■□□□□ 0.52
HTATSF1-204ENST00000535601 KLHL2O95198 593 aa18.31■□□□□ 0.52
HTATSF1-204ENST00000535601 FGBP02675 491 aa18.31■□□□□ 0.52
HTATSF1-204ENST00000535601 FMO4P31512 558 aa18.31■□□□□ 0.52
HTATSF1-204ENST00000535601 CBX2Q14781 532 aaPredicted RBP18.31■□□□□ 0.52
HTATSF1-204ENST00000535601 SETD3Q86TU7 594 aaPredicted RBP18.31■□□□□ 0.52
HTATSF1-204ENST00000535601 PIANPQ8IYJ0 282 aa18.31■□□□□ 0.52
HTATSF1-204ENST00000535601 OR52B2Q96RD2 323 aa18.31■□□□□ 0.52
HTATSF1-204ENST00000535601 LRRC3Q9BY71 257 aa18.31■□□□□ 0.52
HTATSF1-204ENST00000535601 LRMDAQ9H2I8 198 aa18.31■□□□□ 0.52
HTATSF1-204ENST00000535601 MFSD1Q9H3U5 465 aa18.31■□□□□ 0.52
HTATSF1-204ENST00000535601 POMKQ9H5K3 350 aa18.31■□□□□ 0.52
HTATSF1-204ENST00000535601 TNFRSF12AQ9NP84 129 aa18.31■□□□□ 0.52
HTATSF1-204ENST00000535601 POLR3BQ9NW08 1133 aaPredicted RBP18.31■□□□□ 0.52
HTATSF1-204ENST00000535601 VWA7Q9Y334 891 aa18.31■□□□□ 0.52
HTATSF1-204ENST00000535601 SH3BP1Q9Y3L3 701 aa18.31■□□□□ 0.52
HTATSF1-204ENST00000535601 SLC4A7Q9Y6M7 1214 aa18.31■□□□□ 0.52
HTATSF1-204ENST00000535601 GRXCR1A8MXD5 290 aa18.31■□□□□ 0.52
HTATSF1-204ENST00000535601 ZNF195O14628 629 aa18.31■□□□□ 0.52
HTATSF1-204ENST00000535601 MGRN1O60291 552 aa18.31■□□□□ 0.52
HTATSF1-204ENST00000535601 ESRRAP11474 423 aaPredicted RBP18.31■□□□□ 0.52
HTATSF1-204ENST00000535601 PMLP29590 882 aa18.31■□□□□ 0.52
HTATSF1-204ENST00000535601 ZYG11AQ6WRX3 759 aa18.31■□□□□ 0.52
HTATSF1-204ENST00000535601 RBM23Q86U06 439 aaKnown RBP18.31■□□□□ 0.52
HTATSF1-204ENST00000535601 CCDC117Q8IWD4 279 aaPredicted RBP18.31■□□□□ 0.52
HTATSF1-204ENST00000535601 OR4L1Q8NH43 312 aa18.31■□□□□ 0.52
HTATSF1-204ENST00000535601 STYXQ8WUJ0 223 aa18.31■□□□□ 0.52
HTATSF1-204ENST00000535601 CLPTM1LQ96KA5 538 aa18.31■□□□□ 0.52
HTATSF1-204ENST00000535601 RANBP9Q96S59 729 aa18.31■□□□□ 0.52
HTATSF1-204ENST00000535601 NUF2Q9BZD4 464 aa18.31■□□□□ 0.52
HTATSF1-204ENST00000535601 LHX3Q9UBR4 397 aa18.31■□□□□ 0.52
HTATSF1-204ENST00000535601 LRRC14BA6NHZ5 514 aa18.3■□□□□ 0.52
HTATSF1-204ENST00000535601 SIN3BO75182 1162 aa18.3■□□□□ 0.52
HTATSF1-204ENST00000535601 IL1BP01584 269 aa18.3■□□□□ 0.52
HTATSF1-204ENST00000535601 EPHA3P29320 983 aa18.3■□□□□ 0.52
HTATSF1-204ENST00000535601 TIAL1Q01085 375 aaKnown RBP eCLIP18.3■□□□□ 0.52
HTATSF1-204ENST00000535601 PDCD2Q16342 344 aaPredicted RBP18.3■□□□□ 0.52
HTATSF1-204ENST00000535601 PSAPL1Q6NUJ1 521 aa18.3■□□□□ 0.52
HTATSF1-204ENST00000535601 PHTF2Q8N3S3 785 aa18.3■□□□□ 0.52
HTATSF1-204ENST00000535601 OR6Y1Q8NGX8 325 aa18.3■□□□□ 0.52
HTATSF1-204ENST00000535601 ING5Q8WYH8 240 aa18.3■□□□□ 0.52
HTATSF1-204ENST00000535601 ARMC5Q96C12 935 aa18.3■□□□□ 0.52
HTATSF1-204ENST00000535601 NSL1Q96IY1 281 aa18.3■□□□□ 0.52
HTATSF1-204ENST00000535601 CADM1Q9BY67 442 aaKnown RBP18.3■□□□□ 0.52
HTATSF1-204ENST00000535601 LOC100653049A0A140TA62 436 aa18.3■□□□□ 0.52
HTATSF1-204ENST00000535601 CFAP73A6NFT4 308 aa18.3■□□□□ 0.52
HTATSF1-204ENST00000535601 TARM1B6A8C7 271 aa18.3■□□□□ 0.52
HTATSF1-204ENST00000535601 SLC7A4O43246 635 aa18.3■□□□□ 0.52
HTATSF1-204ENST00000535601 ZBTB14O43829 449 aa18.3■□□□□ 0.52
HTATSF1-204ENST00000535601 KRT34O76011 436 aa18.3■□□□□ 0.52
HTATSF1-204ENST00000535601 PPM1AP35813 382 aa18.3■□□□□ 0.52
HTATSF1-204ENST00000535601 Q6ZNB5 142 aa18.3■□□□□ 0.52
HTATSF1-204ENST00000535601 CHST9Q7L1S5 443 aa18.3■□□□□ 0.52
HTATSF1-204ENST00000535601 ITIH5Q86UX2 942 aa18.3■□□□□ 0.52
HTATSF1-204ENST00000535601 ZNF599Q96NL3 588 aa18.3■□□□□ 0.52
HTATSF1-204ENST00000535601 CERS4Q9HA82 394 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms