RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 SPASTQ9UBP0 616 aa10.13□□□□□ -0.79
CLSTN3-203ENST00000534830 IPO11Q9UI26 975 aaKnown RBP10.13□□□□□ -0.79
CLSTN3-203ENST00000534830 MAN2B2Q9Y2E5 1009 aa10.13□□□□□ -0.79
CLSTN3-203ENST00000534830 COQ6Q9Y2Z9 468 aa10.13□□□□□ -0.79
CLSTN3-203ENST00000534830 BZW2Q9Y6E2 419 aaKnown RBP10.13□□□□□ -0.79
CLSTN3-203ENST00000534830 USP9YO00507 2555 aaPredicted RBP10.12□□□□□ -0.79
CLSTN3-203ENST00000534830 CPED1A4D0V7 1026 aa10.12□□□□□ -0.79
CLSTN3-203ENST00000534830 TMEM110-MUSTN1A8MSY1 372 aa10.12□□□□□ -0.79
CLSTN3-203ENST00000534830 LMO7DNF2Z398 122 aa10.12□□□□□ -0.79
CLSTN3-203ENST00000534830 HTRA2O43464 458 aaPredicted RBP10.12□□□□□ -0.79
CLSTN3-203ENST00000534830 SERPINC1P01008 464 aa10.12□□□□□ -0.79
CLSTN3-203ENST00000534830 LIG3P49916 1009 aa10.12□□□□□ -0.79
CLSTN3-203ENST00000534830 SLC25A11Q02978 314 aaKnown RBP10.12□□□□□ -0.79
CLSTN3-203ENST00000534830 RALGDSQ12967 914 aa10.12□□□□□ -0.79
CLSTN3-203ENST00000534830 SRSF6Q13247 344 aaKnown RBP10.12□□□□□ -0.79
CLSTN3-203ENST00000534830 LRRC14Q15048 493 aa10.12□□□□□ -0.79
CLSTN3-203ENST00000534830 CDKN3Q16667 212 aa10.12□□□□□ -0.79
CLSTN3-203ENST00000534830 DEFB133Q30KQ1 61 aa10.12□□□□□ -0.79
CLSTN3-203ENST00000534830 BOLA3Q53S33 107 aa10.12□□□□□ -0.79
CLSTN3-203ENST00000534830 PPP6R3Q5H9R7 873 aaPredicted RBP10.12□□□□□ -0.79
CLSTN3-203ENST00000534830 TXNRD3NBQ6F5E7 133 aa10.12□□□□□ -0.79
CLSTN3-203ENST00000534830 LIPIQ6XZB0 460 aa10.12□□□□□ -0.79
CLSTN3-203ENST00000534830 RBM44Q6ZP01 1051 aaKnown RBP10.12□□□□□ -0.79
CLSTN3-203ENST00000534830 CLEC14AQ86T13 490 aa10.12□□□□□ -0.79
CLSTN3-203ENST00000534830 LUZP1Q86V48 1076 aa10.12□□□□□ -0.79
CLSTN3-203ENST00000534830 PHACTR4Q8IZ21 702 aa10.12□□□□□ -0.79
CLSTN3-203ENST00000534830 CBARPQ8N350 705 aaPredicted RBP10.12□□□□□ -0.79
CLSTN3-203ENST00000534830 WDR36Q8NI36 951 aaKnown RBP10.12□□□□□ -0.79
CLSTN3-203ENST00000534830 FAM71BQ8TC56 605 aa10.12□□□□□ -0.79
CLSTN3-203ENST00000534830 LMX1AQ8TE12 382 aa10.12□□□□□ -0.79
CLSTN3-203ENST00000534830 GRAMD1AQ96CP6 724 aa10.12□□□□□ -0.79
CLSTN3-203ENST00000534830 ZNF599Q96NL3 588 aa10.12□□□□□ -0.79
CLSTN3-203ENST00000534830 PSKH2Q96QS6 385 aa10.12□□□□□ -0.79
CLSTN3-203ENST00000534830 SEMA3CQ99985 751 aa10.12□□□□□ -0.79
CLSTN3-203ENST00000534830 WRAP53Q9BUR4 548 aaKnown RBP10.12□□□□□ -0.79
CLSTN3-203ENST00000534830 APOOQ9BUR5 198 aa10.12□□□□□ -0.79
CLSTN3-203ENST00000534830 LRRC61Q9BV99 259 aa10.12□□□□□ -0.79
CLSTN3-203ENST00000534830 ZWILCHQ9H900 591 aa10.12□□□□□ -0.79
CLSTN3-203ENST00000534830 NCKIPSDQ9NZQ3 722 aa10.12□□□□□ -0.79
CLSTN3-203ENST00000534830 MYO1AQ9UBC5 1043 aa10.12□□□□□ -0.79
CLSTN3-203ENST00000534830 APOBEC3BQ9UH17 382 aaKnown RBP10.12□□□□□ -0.79
CLSTN3-203ENST00000534830 CAPN11Q9UMQ6 739 aa10.12□□□□□ -0.79
CLSTN3-203ENST00000534830 NENFQ9UMX5 172 aa10.12□□□□□ -0.79
CLSTN3-203ENST00000534830 ATP8A1Q9Y2Q0 1164 aa10.12□□□□□ -0.79
CLSTN3-203ENST00000534830 SPTBN1Q01082 2364 aaKnown RBP10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 A0A087X0T9 212 aa10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 SYCE3A1L190 88 aa10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 BLACEA4D250 179 aa10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 DFFAO00273 331 aa10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 YY2O15391 372 aa10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 DAPK3O43293 454 aa10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 MAFKO60675 156 aa10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 PRKCGP05129 697 aa10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 CYP1A2P05177 515 aa10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 HOXC4P09017 264 aaPredicted RBP10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 FAM228BP0C875 321 aa10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 RARAP10276 462 aa10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 TSHRP16473 764 aa10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 AMPD1P23109 780 aa10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 IL4RP24394 825 aa10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 SERPINA4P29622 427 aa10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 TRIM23P36406 574 aa10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 ARSEP51690 589 aa10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 HK3P52790 923 aa10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 THOP1P52888 689 aa10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 ADKP55263 362 aaKnown RBP10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 UBASH3AP57075 661 aa10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 ZBED6P86452 979 aa10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 PPARDQ03181 441 aa10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 SLC10A7Q0GE19 358 aa10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 PIGHQ14442 188 aaPredicted RBP10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 INPP5AQ14642 412 aa10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 LBRQ14739 615 aaKnown RBP10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 TGIF1Q15583 401 aa10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 IGFBP7Q16270 282 aa10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 SMTNL2Q2TAL5 461 aa10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 PRRT3Q5FWE3 981 aa10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 HIST2H2BCQ6DN03 193 aa10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 ERAP2Q6P179 960 aa10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 GUSBP11Q6P575 273 aa10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 CRTC1Q6UUV9 634 aa10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 NYAP1Q6ZVC0 841 aa10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 DPPA4Q7L190 304 aa10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 EFL1Q7Z2Z2 1120 aaKnown RBP10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 PTRH1Q86Y79 214 aaKnown RBP10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 SLC35F3Q8IY50 421 aa10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 SDR16C5Q8N3Y7 309 aa10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 PGBD5Q8N414 524 aa10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 TEKT4Q8WW24 435 aa10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 CSPG4P5Q96PW8 444 aa10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 PSMG3-AS1Q96PY0 264 aa10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 CINPQ9BW66 212 aaPredicted RBP10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 THAP2Q9H0W7 228 aa10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 SLC25A18Q9H1K4 315 aa10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 ATP13A3Q9H7F0 1226 aa10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 SP110Q9HB58 689 aa10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 LRRC4CQ9HCJ2 640 aa10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 UNC13CQ8NB66 2214 aa10.11□□□□□ -0.79
CLSTN3-203ENST00000534830 ICE1Q9Y2F5 2266 aa10.1□□□□□ -0.79
CLSTN3-203ENST00000534830 SCN8AQ9UQD0 1980 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms