RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 NUS1Q96E22 293 aa10.42□□□□□ -0.74
CSDE1-217ENST00000534699 DTD2Q96FN9 168 aa10.42□□□□□ -0.74
CSDE1-217ENST00000534699 C19orf43Q9BQ61 176 aa10.42□□□□□ -0.74
CSDE1-217ENST00000534699 LRRC61Q9BV99 259 aa10.42□□□□□ -0.74
CSDE1-217ENST00000534699 GSDMCQ9BYG8 508 aa10.42□□□□□ -0.74
CSDE1-217ENST00000534699 UCKL1Q9NWZ5 548 aa10.42□□□□□ -0.74
CSDE1-217ENST00000534699 ACSL6Q9UKU0 697 aa10.42□□□□□ -0.74
CSDE1-217ENST00000534699 PADI4Q9UM07 663 aa10.42□□□□□ -0.74
CSDE1-217ENST00000534699 LHX6Q9UPM6 363 aa10.42□□□□□ -0.74
CSDE1-217ENST00000534699 CA5BQ9Y2D0 317 aa10.42□□□□□ -0.74
CSDE1-217ENST00000534699 A0A0A6YYK5 440 aaPredicted RBP10.42□□□□□ -0.74
CSDE1-217ENST00000534699 GOLGA8CPA6NN73 597 aa10.42□□□□□ -0.74
CSDE1-217ENST00000534699 RECQL5O94762 991 aaPredicted RBP10.42□□□□□ -0.74
CSDE1-217ENST00000534699 SLC2A4P14672 509 aa10.42□□□□□ -0.74
CSDE1-217ENST00000534699 IL4RP24394 825 aa10.42□□□□□ -0.74
CSDE1-217ENST00000534699 GKP32189 559 aa10.42□□□□□ -0.74
CSDE1-217ENST00000534699 CCKBRP32239 447 aa10.42□□□□□ -0.74
CSDE1-217ENST00000534699 SCNN1BP51168 640 aa10.42□□□□□ -0.74
CSDE1-217ENST00000534699 DNAJC3Q13217 504 aa10.42□□□□□ -0.74
CSDE1-217ENST00000534699 ARHGEF7Q14155 803 aa10.42□□□□□ -0.74
CSDE1-217ENST00000534699 NFKBIBQ15653 356 aa10.42□□□□□ -0.74
CSDE1-217ENST00000534699 BROXQ5VW32 411 aa10.42□□□□□ -0.74
CSDE1-217ENST00000534699 CCDC170Q8IYT3 715 aa10.42□□□□□ -0.74
CSDE1-217ENST00000534699 OR6K2Q8NGY2 324 aa10.42□□□□□ -0.74
CSDE1-217ENST00000534699 HSPH1Q92598 858 aa10.42□□□□□ -0.74
CSDE1-217ENST00000534699 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.42□□□□□ -0.743e-7■■■■□ 19.8
CSDE1-217ENST00000534699 DOLKQ9UPQ8 538 aa10.42□□□□□ -0.74
CSDE1-217ENST00000534699 CD82P27701 267 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 EIF2S3P41091 472 aaKnown RBP10.41□□□□□ -0.74
CSDE1-217ENST00000534699 CLCNKAP51800 687 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 SLC10A7Q0GE19 358 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 ALG11Q2TAA5 492 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 EFL1Q7Z2Z2 1120 aaKnown RBP10.41□□□□□ -0.74
CSDE1-217ENST00000534699 CLEC14AQ86T13 490 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 C17orf82Q86X59 251 aaPredicted RBP10.41□□□□□ -0.74
CSDE1-217ENST00000534699 TXLNBQ8N3L3 684 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 ZNF248Q8NDW4 579 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 GPR156Q8NFN8 814 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 WDR36Q8NI36 951 aaKnown RBP10.41□□□□□ -0.74
CSDE1-217ENST00000534699 GPBAR1Q8TDU6 330 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 PPP1R2P1Q96PQ5 205 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 UBL7Q96S82 380 aaPredicted RBP10.41□□□□□ -0.74
CSDE1-217ENST00000534699 FRMD8Q9BZ67 464 aaPredicted RBP10.41□□□□□ -0.74
CSDE1-217ENST00000534699 STRADBQ9C0K7 418 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 ABCG4Q9H172 646 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 WDR26Q9H7D7 661 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 MBNL1Q9NR56 388 aaKnown RBP10.41□□□□□ -0.74
CSDE1-217ENST00000534699 ITM2BQ9Y287 266 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 CABIN1Q9Y6J0 2220 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 CCDC187A0A096LP49 1063 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 PPP1R12AO14974 1030 aaPredicted RBP10.41□□□□□ -0.74
CSDE1-217ENST00000534699 AKR1B10O60218 316 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 MFAP3LO75121 409 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 LCA5LO95447 670 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 GPR3P46089 330 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 RGRP47804 291 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 ADKP55263 362 aaKnown RBP10.41□□□□□ -0.74
CSDE1-217ENST00000534699 PCBP4P57723 403 aaKnown RBP10.41□□□□□ -0.74
CSDE1-217ENST00000534699 PPIDQ08752 370 aaKnown RBP10.41□□□□□ -0.74
CSDE1-217ENST00000534699 TRA2AQ13595 282 aaKnown RBP eCLIP10.41□□□□□ -0.74
CSDE1-217ENST00000534699 LRP8Q14114 963 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 TFDP2Q14188 446 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 PDK1Q15118 436 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 ISXQ2M1V0 245 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 ZDHHC20Q5W0Z9 365 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 NCBP2-AS2Q69YL0 99 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 SLC9A4Q6AI14 798 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 ZNF438Q7Z4V0 828 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 TECPR1Q7Z6L1 1165 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 CCDC13Q8IYE1 715 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 CCDC42Q96M95 316 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 RNF157Q96PX1 679 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 VAT1Q99536 393 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 EPB41L1Q9H4G0 881 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 THSD1Q9NS62 852 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 ABHD10Q9NUJ1 306 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 VPS18Q9P253 973 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 GGT7Q9UJ14 662 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 SSUH2Q9Y2M2 353 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 PCDHGA7Q9Y5G6 932 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 ARID1BQ8NFD5 2236 aaPredicted RBP10.41□□□□□ -0.74
CSDE1-217ENST00000534699 YY2O15391 372 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 PSTPIP1O43586 416 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 NUDT21O43809 227 aaKnown RBP10.41□□□□□ -0.74
CSDE1-217ENST00000534699 GLB1P16278 677 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 KDELR1P24390 212 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 CYP4F3Q08477 520 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 TBX2Q13207 712 aaPredicted RBP10.41□□□□□ -0.74
CSDE1-217ENST00000534699 INPP5AQ14642 412 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 TAZQ16635 292 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 PRAMEF14Q5SWL7 426 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 ENPP7Q6UWV6 458 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 RHOT1Q8IXI2 618 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 SNRNP27Q8WVK2 155 aaKnown RBP10.41□□□□□ -0.74
CSDE1-217ENST00000534699 PIH1D2Q8WWB5 315 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 WRAP53Q9BUR4 548 aaKnown RBP10.41□□□□□ -0.74
CSDE1-217ENST00000534699 ADGRE3Q9BY15 652 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 TRIM7Q9C029 511 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 B4GALT6Q9UBX8 382 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 SLC17A4Q9Y2C5 497 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms