RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 AKR1B10O60218 316 aa15.49■□□□□ 0.07
CPSF1-211ENST00000533492 CELA2BP08218 269 aaPredicted RBP15.49■□□□□ 0.07
CPSF1-211ENST00000533492 CD48P09326 243 aa15.49■□□□□ 0.07
CPSF1-211ENST00000533492 CYP2A6P11509 494 aaPredicted RBP15.49■□□□□ 0.07
CPSF1-211ENST00000533492 CR2P20023 1033 aa15.49■□□□□ 0.07
CPSF1-211ENST00000533492 TGM2P21980 687 aa15.49■□□□□ 0.07
CPSF1-211ENST00000533492 EIF2S3P41091 472 aaKnown RBP15.49■□□□□ 0.07
CPSF1-211ENST00000533492 ABCG1P45844 678 aa15.49■□□□□ 0.07
CPSF1-211ENST00000533492 TRIM14Q14142 442 aa15.49■□□□□ 0.07
CPSF1-211ENST00000533492 SLC18A3Q16572 532 aa15.49■□□□□ 0.07
CPSF1-211ENST00000533492 ATP13A4Q4VNC1 1196 aa15.49■□□□□ 0.07
CPSF1-211ENST00000533492 ARMC12Q5T9G4 340 aa15.49■□□□□ 0.07
CPSF1-211ENST00000533492 DENND2CQ68D51 928 aa15.49■□□□□ 0.07
CPSF1-211ENST00000533492 SPECC1LQ69YQ0 1117 aa15.49■□□□□ 0.07
CPSF1-211ENST00000533492 LSMEM2Q8N112 164 aa15.49■□□□□ 0.07
CPSF1-211ENST00000533492 NDUFAF2Q8N183 169 aa15.49■□□□□ 0.07
CPSF1-211ENST00000533492 OR56A4Q8NGH8 313 aa15.49■□□□□ 0.07
CPSF1-211ENST00000533492 FUBP1Q96AE4 644 aaKnown RBP15.49■□□□□ 0.07
CPSF1-211ENST00000533492 KCTD5Q9NXV2 234 aa15.49■□□□□ 0.07
CPSF1-211ENST00000533492 SIRPGQ9P1W8 387 aa15.49■□□□□ 0.07
CPSF1-211ENST00000533492 LCMT1Q9UIC8 334 aa15.49■□□□□ 0.07
CPSF1-211ENST00000533492 MOSPD1Q9UJG1 213 aa15.49■□□□□ 0.07
CPSF1-211ENST00000533492 RP1P56715 2156 aa15.48■□□□□ 0.07
CPSF1-211ENST00000533492 PROSCO94903 275 aa15.48■□□□□ 0.07
CPSF1-211ENST00000533492 MPOP05164 745 aa15.48■□□□□ 0.07
CPSF1-211ENST00000533492 KRT7P08729 469 aa15.48■□□□□ 0.07
CPSF1-211ENST00000533492 KRT10P13645 584 aa15.48■□□□□ 0.07
CPSF1-211ENST00000533492 VIPR1P32241 457 aa15.48■□□□□ 0.07
CPSF1-211ENST00000533492 KIAA1024LP59773 190 aa15.48■□□□□ 0.07
CPSF1-211ENST00000533492 GABREP78334 506 aa15.48■□□□□ 0.07
CPSF1-211ENST00000533492 TRAF2Q12933 501 aa15.48■□□□□ 0.07
CPSF1-211ENST00000533492 ARHGEF7Q14155 803 aa15.48■□□□□ 0.07
CPSF1-211ENST00000533492 DPYSL3Q14195 570 aa15.48■□□□□ 0.07
CPSF1-211ENST00000533492 PDK2Q15119 407 aa15.48■□□□□ 0.07
CPSF1-211ENST00000533492 ISXQ2M1V0 245 aa15.48■□□□□ 0.07
CPSF1-211ENST00000533492 ANKRD20A8PQ5CZ79 823 aa15.48■□□□□ 0.07
CPSF1-211ENST00000533492 PERM1Q5SV97 790 aa15.48■□□□□ 0.07
CPSF1-211ENST00000533492 TIGD7Q6NT04 549 aaPredicted RBP15.48■□□□□ 0.07
CPSF1-211ENST00000533492 PNCKQ6P2M8 343 aa15.48■□□□□ 0.07
CPSF1-211ENST00000533492 RBM44Q6ZP01 1051 aaKnown RBP15.48■□□□□ 0.07
CPSF1-211ENST00000533492 ARL10Q8N8L6 244 aa15.48■□□□□ 0.07
CPSF1-211ENST00000533492 PCDH19Q8TAB3 1148 aa15.48■□□□□ 0.07
CPSF1-211ENST00000533492 WDR48Q8TAF3 677 aa15.48■□□□□ 0.07
CPSF1-211ENST00000533492 FAM71BQ8TC56 605 aa15.48■□□□□ 0.07
CPSF1-211ENST00000533492 SPOCK2Q92563 424 aa15.48■□□□□ 0.07
CPSF1-211ENST00000533492 GRAMD1AQ96CP6 724 aa15.48■□□□□ 0.07
CPSF1-211ENST00000533492 NUS1Q96E22 293 aa15.48■□□□□ 0.07
CPSF1-211ENST00000533492 CCDC3Q9BQI4 270 aa15.48■□□□□ 0.07
CPSF1-211ENST00000533492 WDR26Q9H7D7 661 aa15.48■□□□□ 0.07
CPSF1-211ENST00000533492 SYNDIG1Q9H7V2 258 aa15.48■□□□□ 0.07
CPSF1-211ENST00000533492 HAUS2Q9NVX0 235 aa15.48■□□□□ 0.07
CPSF1-211ENST00000533492 NENFQ9UMX5 172 aa15.48■□□□□ 0.07
CPSF1-211ENST00000533492 GPR34Q9UPC5 381 aa15.48■□□□□ 0.07
CPSF1-211ENST00000533492 DGKBQ9Y6T7 804 aa15.48■□□□□ 0.07
CPSF1-211ENST00000533492 CACNA1GO43497 2377 aa15.47■□□□□ 0.07
CPSF1-211ENST00000533492 SSU72P8A0A1W2PR75 194 aa15.47■□□□□ 0.07
CPSF1-211ENST00000533492 TMEM202A6NGA9 273 aa15.47■□□□□ 0.07
CPSF1-211ENST00000533492 TNFRSF10CO14798 259 aa15.47■□□□□ 0.07
CPSF1-211ENST00000533492 LAMA5O15230 3695 aa15.47■□□□□ 0.07
CPSF1-211ENST00000533492 MFSD11O43934 449 aa15.47■□□□□ 0.07
CPSF1-211ENST00000533492 HEXIM1O94992 359 aaKnown RBP15.47■□□□□ 0.07
CPSF1-211ENST00000533492 HOXC4P09017 264 aaPredicted RBP15.47■□□□□ 0.07
CPSF1-211ENST00000533492 TRIM23P36406 574 aa15.47■□□□□ 0.07
CPSF1-211ENST00000533492 GARSP41250 739 aaKnown RBP15.47■□□□□ 0.07
CPSF1-211ENST00000533492 LSSP48449 732 aa15.47■□□□□ 0.07
CPSF1-211ENST00000533492 ARSEP51690 589 aa15.47■□□□□ 0.07
CPSF1-211ENST00000533492 GALNT2Q10471 571 aa15.47■□□□□ 0.07
CPSF1-211ENST00000533492 PAFAH1B3Q15102 231 aaKnown RBP15.47■□□□□ 0.07
CPSF1-211ENST00000533492 CNGA3Q16281 694 aa15.47■□□□□ 0.07
CPSF1-211ENST00000533492 IFI16Q16666 785 aaKnown RBP15.47■□□□□ 0.07
CPSF1-211ENST00000533492 TBC1D25Q3MII6 688 aa15.47■□□□□ 0.07
CPSF1-211ENST00000533492 NCBP2-AS2Q69YL0 99 aa15.47■□□□□ 0.07
CPSF1-211ENST00000533492 USP45Q70EL2 814 aa15.47■□□□□ 0.07
CPSF1-211ENST00000533492 TAF8Q7Z7C8 310 aa15.47■□□□□ 0.07
CPSF1-211ENST00000533492 TEX26Q8N6G2 289 aa15.47■□□□□ 0.07
CPSF1-211ENST00000533492 SNIP1Q8TAD8 396 aaKnown RBP15.47■□□□□ 0.07
CPSF1-211ENST00000533492 SCRN2Q96FV2 425 aa15.47■□□□□ 0.07
CPSF1-211ENST00000533492 PDXPQ96GD0 296 aa15.47■□□□□ 0.07
CPSF1-211ENST00000533492 COQ10AQ96MF6 247 aa15.47■□□□□ 0.07
CPSF1-211ENST00000533492 RBM15Q96T37 977 aaKnown RBP eCLIP15.47■□□□□ 0.07
CPSF1-211ENST00000533492 SEMA3CQ99985 751 aa15.47■□□□□ 0.07
CPSF1-211ENST00000533492 ZNF670Q9BS34 389 aa15.47■□□□□ 0.07
CPSF1-211ENST00000533492 PACSIN1Q9BY11 444 aa15.47■□□□□ 0.07
CPSF1-211ENST00000533492 POLR1EQ9GZS1 481 aaKnown RBP15.47■□□□□ 0.07
CPSF1-211ENST00000533492 TSPY26PQ9H489 355 aa15.47■□□□□ 0.07
CPSF1-211ENST00000533492 POLR1BQ9H9Y6 1135 aa15.47■□□□□ 0.07
CPSF1-211ENST00000533492 RAI2Q9Y5P3 530 aa15.47■□□□□ 0.07
CPSF1-211ENST00000533492 GOLGA6CA6NDK9 693 aa15.46■□□□□ 0.07
CPSF1-211ENST00000533492 GOLGA6BA6NDN3 693 aa15.46■□□□□ 0.07
CPSF1-211ENST00000533492 MATN3O15232 486 aa15.46■□□□□ 0.07
CPSF1-211ENST00000533492 TCEA3O75764 348 aa15.46■□□□□ 0.07
CPSF1-211ENST00000533492 PGLSO95336 258 aa15.46■□□□□ 0.07
CPSF1-211ENST00000533492 MAP3K6O95382 1288 aa15.46■□□□□ 0.07
CPSF1-211ENST00000533492 TMEM253P0C7T8 217 aa15.46■□□□□ 0.07
CPSF1-211ENST00000533492 GOLGA6DP0CG33 693 aa15.46■□□□□ 0.07
CPSF1-211ENST00000533492 CTPS1P17812 591 aa15.46■□□□□ 0.07
CPSF1-211ENST00000533492 GM2AP17900 193 aa15.46■□□□□ 0.07
CPSF1-211ENST00000533492 MX2P20592 715 aa15.46■□□□□ 0.07
CPSF1-211ENST00000533492 CES1P23141 567 aa15.46■□□□□ 0.07
CPSF1-211ENST00000533492 CCNCP24863 283 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms