RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 ZDHHC1Q8WTX9 485 aa7.83□□□□□ -1.16
NXF1-215ENST00000533440 CASKIN2Q8WXE0 1202 aa7.83□□□□□ -1.16
NXF1-215ENST00000533440 STARD8Q92502 1023 aa7.83□□□□□ -1.16
NXF1-215ENST00000533440 FAM81BQ96LP2 452 aa7.83□□□□□ -1.16
NXF1-215ENST00000533440 GSDMAQ96QA5 445 aa7.83□□□□□ -1.16
NXF1-215ENST00000533440 CYP4F12Q9HCS2 524 aa7.83□□□□□ -1.16
NXF1-215ENST00000533440 PCDH12Q9NPG4 1184 aa7.83□□□□□ -1.16
NXF1-215ENST00000533440 TMEM248Q9NWD8 314 aa7.83□□□□□ -1.16
NXF1-215ENST00000533440 TMEM9Q9P0T7 183 aa7.83□□□□□ -1.16
NXF1-215ENST00000533440 DNAI1Q9UI46 699 aa7.83□□□□□ -1.16
NXF1-215ENST00000533440 HPCAL4Q9UM19 191 aa7.83□□□□□ -1.16
NXF1-215ENST00000533440 NEU3Q9UQ49 428 aa7.83□□□□□ -1.16
NXF1-215ENST00000533440 TMEM184BQ9Y519 407 aaPredicted RBP7.83□□□□□ -1.16
NXF1-215ENST00000533440 ANKRD36A6QL64 1941 aa7.83□□□□□ -1.16
NXF1-215ENST00000533440 ZFHX3Q15911 3703 aa7.83□□□□□ -1.16
NXF1-215ENST00000533440 ESPL1Q14674 2120 aa7.82□□□□□ -1.16
NXF1-215ENST00000533440 C2CD3Q4AC94 2353 aa7.82□□□□□ -1.16
NXF1-215ENST00000533440 PRSS38A1L453 326 aa7.82□□□□□ -1.16
NXF1-215ENST00000533440 A1L4Q6 167 aa7.82□□□□□ -1.16
NXF1-215ENST00000533440 MKRN2OSH3BPM6 223 aa7.82□□□□□ -1.16
NXF1-215ENST00000533440 PPM1DO15297 605 aa7.82□□□□□ -1.16
NXF1-215ENST00000533440 RAMP2O60895 175 aa7.82□□□□□ -1.16
NXF1-215ENST00000533440 KRT38O76015 456 aa7.82□□□□□ -1.16
NXF1-215ENST00000533440 RECQL5O94762 991 aaPredicted RBP7.82□□□□□ -1.16
NXF1-215ENST00000533440 PIGNO95427 931 aa7.82□□□□□ -1.16
NXF1-215ENST00000533440 ECEL1O95672 775 aa7.82□□□□□ -1.16
NXF1-215ENST00000533440 DDAH2O95865 285 aa7.82□□□□□ -1.16
NXF1-215ENST00000533440 DLGAP3O95886 979 aa7.82□□□□□ -1.16
NXF1-215ENST00000533440 GM2AP17900 193 aa7.82□□□□□ -1.16
NXF1-215ENST00000533440 XPAP23025 273 aaPredicted RBP7.82□□□□□ -1.16
NXF1-215ENST00000533440 MPSTP25325 297 aa7.82□□□□□ -1.16
NXF1-215ENST00000533440 COL8A1P27658 744 aa7.82□□□□□ -1.16
NXF1-215ENST00000533440 FLT3P36888 993 aa7.82□□□□□ -1.16
NXF1-215ENST00000533440 DCTP40126 519 aa7.82□□□□□ -1.16
NXF1-215ENST00000533440 GABRB2P47870 512 aa7.82□□□□□ -1.16
NXF1-215ENST00000533440 MARSP56192 900 aaKnown RBP7.82□□□□□ -1.16
NXF1-215ENST00000533440 RIPPLY3P57055 190 aa7.82□□□□□ -1.16
NXF1-215ENST00000533440 RHOAP61586 193 aa7.82□□□□□ -1.16
NXF1-215ENST00000533440 KRT85P78386 507 aa7.82□□□□□ -1.16
NXF1-215ENST00000533440 MC2RQ01718 297 aa7.82□□□□□ -1.16
NXF1-215ENST00000533440 NKAIN2Q5VXU1 208 aa7.82□□□□□ -1.16
NXF1-215ENST00000533440 TRNP1Q6NT89 227 aa7.82□□□□□ -1.16
NXF1-215ENST00000533440 TTI2Q6NXR4 508 aa7.82□□□□□ -1.16
NXF1-215ENST00000533440 ERAP2Q6P179 960 aa7.82□□□□□ -1.16
NXF1-215ENST00000533440 C16orf46Q6P387 395 aa7.82□□□□□ -1.16
NXF1-215ENST00000533440 GJB7Q6PEY0 223 aa7.82□□□□□ -1.16
NXF1-215ENST00000533440 ASB18Q6ZVZ8 466 aa7.82□□□□□ -1.16
NXF1-215ENST00000533440 FAM131BQ86XD5 332 aa7.82□□□□□ -1.16
NXF1-215ENST00000533440 FAM129CQ86XR2 697 aa7.82□□□□□ -1.16
NXF1-215ENST00000533440 NRSN1Q8IZ57 195 aa7.82□□□□□ -1.16
NXF1-215ENST00000533440 NAGSQ8N159 534 aa7.82□□□□□ -1.16
NXF1-215ENST00000533440 CPT1CQ8TCG5 803 aa7.82□□□□□ -1.16
NXF1-215ENST00000533440 PATE1Q8WXA2 126 aa7.82□□□□□ -1.16
NXF1-215ENST00000533440 SHC3Q92529 594 aa7.82□□□□□ -1.16
NXF1-215ENST00000533440 CCDC34Q96HJ3 373 aa7.82□□□□□ -1.16
NXF1-215ENST00000533440 DHTKD1Q96HY7 919 aaPredicted RBP7.82□□□□□ -1.16
NXF1-215ENST00000533440 ZPBPQ9BS86 351 aa7.82□□□□□ -1.16
NXF1-215ENST00000533440 LGR4Q9BXB1 951 aa7.82□□□□□ -1.16
NXF1-215ENST00000533440 GSDMCQ9BYG8 508 aa7.82□□□□□ -1.16
NXF1-215ENST00000533440 TRIT1Q9H3H1 467 aaKnown RBP7.82□□□□□ -1.16
NXF1-215ENST00000533440 SUV39H2Q9H5I1 410 aa7.82□□□□□ -1.16
NXF1-215ENST00000533440 SYNCQ9H7C4 482 aa7.82□□□□□ -1.16
NXF1-215ENST00000533440 FBXO8Q9NRD0 319 aa7.82□□□□□ -1.16
NXF1-215ENST00000533440 TRNAU1APQ9NX07 287 aaKnown RBP7.82□□□□□ -1.16
NXF1-215ENST00000533440 TAAR2Q9P1P5 351 aa7.82□□□□□ -1.16
NXF1-215ENST00000533440 OR12D3Q9UGF7 316 aa7.82□□□□□ -1.16
NXF1-215ENST00000533440 SRPK3Q9UPE1 567 aa7.82□□□□□ -1.16
NXF1-215ENST00000533440 ST14Q9Y5Y6 855 aa7.82□□□□□ -1.16
NXF1-215ENST00000533440 HIVEP3Q5T1R4 2406 aa7.82□□□□□ -1.16
NXF1-215ENST00000533440 SHANK1Q9Y566 2161 aa7.81□□□□□ -1.16
NXF1-215ENST00000533440 WIPF3A6NGB9 483 aa7.81□□□□□ -1.16
NXF1-215ENST00000533440 FAM72CH0Y354 149 aa7.81□□□□□ -1.16
NXF1-215ENST00000533440 PDE2AO00408 941 aaPredicted RBP7.81□□□□□ -1.16
NXF1-215ENST00000533440 PSMA7O14818 248 aa7.81□□□□□ -1.16
NXF1-215ENST00000533440 BUB1O43683 1085 aa7.81□□□□□ -1.16
NXF1-215ENST00000533440 FUCA1P04066 466 aa7.81□□□□□ -1.16
NXF1-215ENST00000533440 PDGFAP04085 211 aa7.81□□□□□ -1.16
NXF1-215ENST00000533440 F8A1P23610 371 aa7.81□□□□□ -1.16
NXF1-215ENST00000533440 TNFRSF8P28908 595 aa7.81□□□□□ -1.16
NXF1-215ENST00000533440 CDH5P33151 784 aaPredicted RBP7.81□□□□□ -1.16
NXF1-215ENST00000533440 KRT9P35527 623 aa7.81□□□□□ -1.16
NXF1-215ENST00000533440 USP8P40818 1118 aa7.81□□□□□ -1.16
NXF1-215ENST00000533440 STAT5AP42229 794 aa7.81□□□□□ -1.16
NXF1-215ENST00000533440 COPB1P53618 953 aaKnown RBP7.81□□□□□ -1.16
NXF1-215ENST00000533440 GPLD1P80108 840 aa7.81□□□□□ -1.16
NXF1-215ENST00000533440 PTK2Q05397 1052 aa7.81□□□□□ -1.16
NXF1-215ENST00000533440 ILF3Q12906 894 aaKnown RBP eCLIP7.81□□□□□ -1.16
NXF1-215ENST00000533440 RALGDSQ12967 914 aa7.81□□□□□ -1.16
NXF1-215ENST00000533440 RAPGEF1Q13905 1077 aa7.81□□□□□ -1.16
NXF1-215ENST00000533440 MAP7Q14244 749 aa7.81□□□□□ -1.16
NXF1-215ENST00000533440 GRM3Q14832 879 aa7.81□□□□□ -1.16
NXF1-215ENST00000533440 FAM102AQ5T9C2 384 aaPredicted RBP7.81□□□□□ -1.16
NXF1-215ENST00000533440 FAM72AQ5TYM5 149 aa7.81□□□□□ -1.16
NXF1-215ENST00000533440 FAM72DQ6L9T8 149 aa7.81□□□□□ -1.16
NXF1-215ENST00000533440 TRIM65Q6PJ69 517 aa7.81□□□□□ -1.16
NXF1-215ENST00000533440 BRAT1Q6PJG6 821 aa7.81□□□□□ -1.16
NXF1-215ENST00000533440 CEACAM20Q6UY09 585 aa7.81□□□□□ -1.16
NXF1-215ENST00000533440 LIPIQ6XZB0 460 aa7.81□□□□□ -1.16
NXF1-215ENST00000533440 ARCQ7LC44 396 aa7.81□□□□□ -1.16
NXF1-215ENST00000533440 MAMDC2Q7Z304 686 aaPredicted RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms