RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 AK8Q96MA6 479 aa5.55□□□□□ -1.52
CD44-236ENST00000533222 ZIM3Q96PE6 472 aa5.55□□□□□ -1.52
CD44-236ENST00000533222 KCNC2Q96PR1 638 aa5.55□□□□□ -1.52
CD44-236ENST00000533222 PIP5K1AQ99755 562 aa5.55□□□□□ -1.52
CD44-236ENST00000533222 DDX50Q9BQ39 737 aaKnown RBP5.55□□□□□ -1.52
CD44-236ENST00000533222 SOX7Q9BT81 388 aa5.55□□□□□ -1.52
CD44-236ENST00000533222 BRIP1Q9BX63 1249 aa5.55□□□□□ -1.52
CD44-236ENST00000533222 GPR61Q9BZJ8 451 aa5.55□□□□□ -1.52
CD44-236ENST00000533222 DCLK3Q9C098 648 aa5.55□□□□□ -1.52
CD44-236ENST00000533222 HOXD1Q9GZZ0 328 aa5.55□□□□□ -1.52
CD44-236ENST00000533222 KATNBL1Q9H079 304 aa5.55□□□□□ -1.52
CD44-236ENST00000533222 PUS7LQ9H0K6 701 aaKnown RBP5.55□□□□□ -1.52
CD44-236ENST00000533222 WDR6Q9NNW5 1121 aaKnown RBP5.55□□□□□ -1.52
CD44-236ENST00000533222 ANLNQ9NQW6 1124 aa5.55□□□□□ -1.52
CD44-236ENST00000533222 CCM2LQ9NUG4 571 aaPredicted RBP5.55□□□□□ -1.52
CD44-236ENST00000533222 NUDT15Q9NV35 164 aa5.55□□□□□ -1.52
CD44-236ENST00000533222 EXD2Q9NVH0 621 aa5.55□□□□□ -1.52
CD44-236ENST00000533222 DACT1Q9NYF0 836 aa5.55□□□□□ -1.52
CD44-236ENST00000533222 RRN3Q9NYV6 651 aa5.55□□□□□ -1.52
CD44-236ENST00000533222 TAS2R1Q9NYW7 299 aa5.55□□□□□ -1.52
CD44-236ENST00000533222 WWOXQ9NZC7 414 aa5.55□□□□□ -1.52
CD44-236ENST00000533222 FBXO40Q9UH90 709 aa5.55□□□□□ -1.52
CD44-236ENST00000533222 TUBE1Q9UJT0 475 aa5.55□□□□□ -1.52
CD44-236ENST00000533222 ADAM29Q9UKF5 820 aa5.55□□□□□ -1.52
CD44-236ENST00000533222 USP18Q9UMW8 372 aa5.55□□□□□ -1.52
CD44-236ENST00000533222 GAB2Q9UQC2 676 aa5.55□□□□□ -1.52
CD44-236ENST00000533222 ENTPD4Q9Y227 616 aa5.55□□□□□ -1.52
CD44-236ENST00000533222 ARL2BPQ9Y2Y0 163 aa5.55□□□□□ -1.52
CD44-236ENST00000533222 USP15Q9Y4E8 981 aaPredicted RBP5.55□□□□□ -1.52
CD44-236ENST00000533222 PCDHA3Q9Y5H8 950 aa5.55□□□□□ -1.52
CD44-236ENST00000533222 SAR1BQ9Y6B6 198 aa5.55□□□□□ -1.52
CD44-236ENST00000533222 ADGBQ8N7X0 1667 aa5.55□□□□□ -1.52
CD44-236ENST00000533222 FGD6Q6ZV73 1430 aa5.55□□□□□ -1.52
CD44-236ENST00000533222 ANKARQ7Z5J8 1434 aa5.55□□□□□ -1.52
CD44-236ENST00000533222 PSME4Q14997 1843 aa5.55□□□□□ -1.52
CD44-236ENST00000533222 FLT1P17948 1338 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 NEO1Q92859 1461 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 TUBGCP6Q96RT7 1819 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 ST20-MTHFSA0A0A6YYL1 179 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 KRTAP9-6A0A140TA67 174 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 E2F8A0AVK6 867 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 MROH6A6NGR9 719 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 TMEM210A6NLX4 147 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 C2orf74A8MZ97 194 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 ZNF487B1APH4 448 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 ZNF879B4DU55 563 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 ALG1L2C9J202 215 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 E9PAM4 449 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 K7ESF4 209 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 FZD9O00144 591 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 DENRO43583 198 aaKnown RBP5.54□□□□□ -1.52
CD44-236ENST00000533222 B4GALT3O60512 393 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 BMP10O95393 424 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 SNAP29O95721 258 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 RB1P06400 928 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 ASGR1P07306 291 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 INHBBP09529 407 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 ARP10275 920 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 ANXA8P13928 327 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 SELLP14151 372 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 ALOX12P18054 663 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 RAB3AP20336 220 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 TNFAIP3P21580 790 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 MARK3P27448 753 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 PRDX6P30041 224 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 NMT1P30419 496 aaKnown RBP5.54□□□□□ -1.52
CD44-236ENST00000533222 ETV5P41161 510 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 PHKA1P46020 1223 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 NPY2RP49146 381 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 PRIM2P49643 509 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 MAPK12P53778 367 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 SEC24CP53992 1094 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 CDH6P55285 790 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 KCNJ2P63252 427 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 ADAM17P78536 824 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 IFITM2Q01629 132 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 PPARAQ07869 468 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 TRAF2Q12933 501 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 KLF1Q13351 362 aaPredicted RBP5.54□□□□□ -1.52
CD44-236ENST00000533222 MED21Q13503 144 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 MORF4L2Q15014 288 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 RRS1Q15050 365 aaKnown RBP5.54□□□□□ -1.52
CD44-236ENST00000533222 EIF4HQ15056 248 aaKnown RBP5.54□□□□□ -1.52
CD44-236ENST00000533222 TBR1Q16650 682 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 FSCN1Q16658 493 aaKnown RBP5.54□□□□□ -1.52
CD44-236ENST00000533222 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.54□□□□□ -1.52
CD44-236ENST00000533222 SMU1Q2TAY7 513 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 INAVAQ3KP66 663 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 ADCK5Q3MIX3 580 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 ESCO2Q56NI9 601 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 TNFAIP8L3Q5GJ75 292 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 TOR2AQ5JU69 321 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 TTC22Q5TAA0 569 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 ANXA8L1Q5VT79 327 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 GARNL3Q5VVW2 1013 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 CENPPQ6IPU0 288 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 PLEKHA7Q6IQ23 1121 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 ZNF425Q6IV72 752 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 LIN54Q6MZP7 749 aa5.54□□□□□ -1.52
CD44-236ENST00000533222 KLHDC10Q6PID8 442 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms