RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 RALGPS1Q5JS13 557 aa18.58■□□□□ 0.56
SMPD1-208ENST00000533123 MROH9Q5TGP6 573 aa18.58■□□□□ 0.56
SMPD1-208ENST00000533123 ICE2Q659A1 982 aa18.58■□□□□ 0.56
SMPD1-208ENST00000533123 CHPFQ8IZ52 775 aa18.58■□□□□ 0.56
SMPD1-208ENST00000533123 BANPQ8N9N5 519 aa18.58■□□□□ 0.56
SMPD1-208ENST00000533123 KDM1BQ8NB78 822 aa18.58■□□□□ 0.56
SMPD1-208ENST00000533123 ZNF473Q8WTR7 871 aaKnown RBP18.58■□□□□ 0.56
SMPD1-208ENST00000533123 CHMP6Q96FZ7 201 aa18.58■□□□□ 0.56
SMPD1-208ENST00000533123 CCDC134Q9H6E4 229 aa18.58■□□□□ 0.56
SMPD1-208ENST00000533123 KRT37O76014 449 aa18.57■□□□□ 0.56
SMPD1-208ENST00000533123 POP4O95707 220 aaKnown RBP18.57■□□□□ 0.56
SMPD1-208ENST00000533123 SNRPAP09012 282 aaKnown RBP18.57■□□□□ 0.56
SMPD1-208ENST00000533123 GLULP15104 373 aa18.57■□□□□ 0.56
SMPD1-208ENST00000533123 WASP42768 502 aa18.57■□□□□ 0.56
SMPD1-208ENST00000533123 CCT5P48643 541 aa18.57■□□□□ 0.56
SMPD1-208ENST00000533123 BCL2L1Q07817 233 aa18.57■□□□□ 0.56
SMPD1-208ENST00000533123 GALNT3Q14435 633 aa18.57■□□□□ 0.56
SMPD1-208ENST00000533123 HNRNPA1L2Q32P51 320 aaKnown RBP18.57■□□□□ 0.56
SMPD1-208ENST00000533123 SH2D5Q6ZV89 423 aa18.57■□□□□ 0.56
SMPD1-208ENST00000533123 GRIN3AQ8TCU5 1115 aa18.57■□□□□ 0.56
SMPD1-208ENST00000533123 FAM3CQ92520 227 aa18.57■□□□□ 0.56
SMPD1-208ENST00000533123 ZFATQ9P243 1243 aa18.57■□□□□ 0.56
SMPD1-208ENST00000533123 GRID1Q9ULK0 1009 aa18.57■□□□□ 0.56
SMPD1-208ENST00000533123 CA14Q9ULX7 337 aa18.57■□□□□ 0.56
SMPD1-208ENST00000533123 FAM169AQ9Y6X4 670 aa18.57■□□□□ 0.56
SMPD1-208ENST00000533123 MUC22E2RYF6 1773 aaPredicted RBP18.57■□□□□ 0.56
SMPD1-208ENST00000533123 C19orf67A6NJJ6 358 aa18.57■□□□□ 0.56
SMPD1-208ENST00000533123 PRLP01236 227 aa18.57■□□□□ 0.56
SMPD1-208ENST00000533123 DRD1P21728 446 aa18.57■□□□□ 0.56
SMPD1-208ENST00000533123 MAPK8P45983 427 aa18.57■□□□□ 0.56
SMPD1-208ENST00000533123 SLC14A2Q15849 920 aa18.57■□□□□ 0.56
SMPD1-208ENST00000533123 SIRPB2Q5JXA9 342 aa18.57■□□□□ 0.56
SMPD1-208ENST00000533123 PACS1Q6VY07 963 aa18.57■□□□□ 0.56
SMPD1-208ENST00000533123 PLPP6Q8IY26 295 aa18.57■□□□□ 0.56
SMPD1-208ENST00000533123 CDKL2Q92772 493 aa18.57■□□□□ 0.56
SMPD1-208ENST00000533123 FEM1CQ96JP0 617 aa18.57■□□□□ 0.56
SMPD1-208ENST00000533123 TRIB3Q96RU7 358 aa18.57■□□□□ 0.56
SMPD1-208ENST00000533123 AGAP2Q99490 1192 aa18.57■□□□□ 0.56
SMPD1-208ENST00000533123 KIFC1Q9BW19 673 aa18.57■□□□□ 0.56
SMPD1-208ENST00000533123 ATP13A3Q9H7F0 1226 aa18.57■□□□□ 0.56
SMPD1-208ENST00000533123 PCDHB9Q9Y5E1 797 aa18.57■□□□□ 0.56
SMPD1-208ENST00000533123 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.56■□□□□ 0.56
SMPD1-208ENST00000533123 GOLGA8TH3BQL2 631 aa18.56■□□□□ 0.56
SMPD1-208ENST00000533123 AP3B1O00203 1094 aa18.56■□□□□ 0.56
SMPD1-208ENST00000533123 ASMTLO95671 621 aa18.56■□□□□ 0.56
SMPD1-208ENST00000533123 EPHX1P07099 455 aa18.56■□□□□ 0.56
SMPD1-208ENST00000533123 ATXN1LP0C7T5 689 aaKnown RBP18.56■□□□□ 0.56
SMPD1-208ENST00000533123 HNRNPLP14866 589 aaKnown RBP eCLIP18.56■□□□□ 0.56
SMPD1-208ENST00000533123 TCP10LQ8TDR4 215 aa18.56■□□□□ 0.56
SMPD1-208ENST00000533123 SSU72Q9NP77 194 aaKnown RBP18.56■□□□□ 0.56
SMPD1-208ENST00000533123 SLC17A7Q9P2U7 560 aa18.56■□□□□ 0.56
SMPD1-208ENST00000533123 STON1Q9Y6Q2 735 aa18.56■□□□□ 0.56
SMPD1-208ENST00000533123 MAGEB16A2A368 324 aa18.55■□□□□ 0.56
SMPD1-208ENST00000533123 TRAFD1O14545 582 aaPredicted RBP18.55■□□□□ 0.56
SMPD1-208ENST00000533123 SIN3BO75182 1162 aa18.55■□□□□ 0.56
SMPD1-208ENST00000533123 RFPL1O75677 317 aa18.55■□□□□ 0.56
SMPD1-208ENST00000533123 KRT38O76015 456 aa18.55■□□□□ 0.56
SMPD1-208ENST00000533123 EPOP01588 193 aa18.55■□□□□ 0.56
SMPD1-208ENST00000533123 DRD4P21917 467 aa18.55■□□□□ 0.56
SMPD1-208ENST00000533123 RAD51Q06609 339 aa18.55■□□□□ 0.56
SMPD1-208ENST00000533123 MLF2Q15773 248 aaPredicted RBP18.55■□□□□ 0.56
SMPD1-208ENST00000533123 HSP90AA5PQ58FG0 334 aa18.55■□□□□ 0.56
SMPD1-208ENST00000533123 C9orf64Q5T6V5 341 aa18.55■□□□□ 0.56
SMPD1-208ENST00000533123 LRRC34Q8IZ02 419 aa18.55■□□□□ 0.56
SMPD1-208ENST00000533123 CKAP2Q8WWK9 683 aa18.55■□□□□ 0.56
SMPD1-208ENST00000533123 RMDN1Q96DB5 314 aa18.55■□□□□ 0.56
SMPD1-208ENST00000533123 SGSM3Q96HU1 749 aa18.55■□□□□ 0.56
SMPD1-208ENST00000533123 HEPHQ9BQS7 1158 aa18.55■□□□□ 0.56
SMPD1-208ENST00000533123 CPEB1Q9BZB8 566 aaKnown RBP18.55■□□□□ 0.56
SMPD1-208ENST00000533123 ARNT2Q9HBZ2 717 aa18.55■□□□□ 0.56
SMPD1-208ENST00000533123 ARIH1Q9Y4X5 557 aaPredicted RBP18.55■□□□□ 0.56
SMPD1-208ENST00000533123 WASF2Q9Y6W5 498 aa18.55■□□□□ 0.56
SMPD1-208ENST00000533123 EDDM13A0A1B0GTR0 161 aa18.55■□□□□ 0.56
SMPD1-208ENST00000533123 TCP11X1B4DZS4 312 aa18.55■□□□□ 0.56
SMPD1-208ENST00000533123 NDST3O95803 873 aa18.55■□□□□ 0.56
SMPD1-208ENST00000533123 UGT2B4P06133 528 aa18.55■□□□□ 0.56
SMPD1-208ENST00000533123 CTSLP07711 333 aa18.55■□□□□ 0.56
SMPD1-208ENST00000533123 SERPINA4P29622 427 aa18.55■□□□□ 0.56
SMPD1-208ENST00000533123 FOXN2P32314 431 aa18.55■□□□□ 0.56
SMPD1-208ENST00000533123 SLC18A1P54219 525 aa18.55■□□□□ 0.56
SMPD1-208ENST00000533123 ARSIQ5FYB1 569 aa18.55■□□□□ 0.56
SMPD1-208ENST00000533123 PCID2Q5JVF3 399 aa18.55■□□□□ 0.56
SMPD1-208ENST00000533123 LGSNQ5TDP6 509 aa18.55■□□□□ 0.56
SMPD1-208ENST00000533123 PKN3Q6P5Z2 889 aa18.55■□□□□ 0.56
SMPD1-208ENST00000533123 MICALCLQ6ZW33 695 aa18.55■□□□□ 0.56
SMPD1-208ENST00000533123 PAF1Q8N7H5 531 aa18.55■□□□□ 0.56
SMPD1-208ENST00000533123 LPCAT1Q8NF37 534 aa18.55■□□□□ 0.56
SMPD1-208ENST00000533123 ASB2Q96Q27 587 aa18.55■□□□□ 0.56
SMPD1-208ENST00000533123 SMIM14Q96QK8 99 aa18.55■□□□□ 0.56
SMPD1-208ENST00000533123 C20orf96Q9NUD7 363 aaPredicted RBP18.55■□□□□ 0.56
SMPD1-208ENST00000533123 NDRG2Q9UN36 371 aaKnown RBP18.55■□□□□ 0.56
SMPD1-208ENST00000533123 LEFTY1O75610 366 aa18.54■□□□□ 0.56
SMPD1-208ENST00000533123 VIMP08670 466 aaKnown RBP18.54■□□□□ 0.56
SMPD1-208ENST00000533123 SLC8A1P32418 973 aa18.54■□□□□ 0.56
SMPD1-208ENST00000533123 SLC18A2Q05940 514 aa18.54■□□□□ 0.56
SMPD1-208ENST00000533123 SEPT6Q14141 434 aa18.54■□□□□ 0.56
SMPD1-208ENST00000533123 KCNMB4Q86W47 210 aa18.54■□□□□ 0.56
SMPD1-208ENST00000533123 STK40Q8N2I9 435 aa18.54■□□□□ 0.56
SMPD1-208ENST00000533123 MSANTD3Q96H12 275 aa18.54■□□□□ 0.56
SMPD1-208ENST00000533123 APOPT1Q96IL0 206 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms