RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 TRPM6Q9BX84 2022 aa13.07□□□□□ -0.32
COPB1-209ENST00000533096 TTC24A2A3L6 582 aaPredicted RBP13.07□□□□□ -0.32
COPB1-209ENST00000533096 ZW10O43264 779 aa13.07□□□□□ -0.32
COPB1-209ENST00000533096 PALMO75781 387 aa13.07□□□□□ -0.32
COPB1-209ENST00000533096 NTRK1P04629 796 aa13.07□□□□□ -0.32
COPB1-209ENST00000533096 ELFN1P0C7U0 828 aa13.07□□□□□ -0.32
COPB1-209ENST00000533096 GP1BBP13224 206 aa13.07□□□□□ -0.32
COPB1-209ENST00000533096 UCHL3P15374 230 aa13.07□□□□□ -0.32
COPB1-209ENST00000533096 GPD1P21695 349 aa13.07□□□□□ -0.32
COPB1-209ENST00000533096 MMP8P22894 467 aa13.07□□□□□ -0.32
COPB1-209ENST00000533096 GNPDA1P46926 289 aa13.07□□□□□ -0.32
COPB1-209ENST00000533096 RGRP47804 291 aa13.07□□□□□ -0.32
COPB1-209ENST00000533096 POLD2P49005 469 aa13.07□□□□□ -0.32
COPB1-209ENST00000533096 PNCKQ6P2M8 343 aa13.07□□□□□ -0.32
COPB1-209ENST00000533096 BRAT1Q6PJG6 821 aa13.07□□□□□ -0.32
COPB1-209ENST00000533096 LIPIQ6XZB0 460 aa13.07□□□□□ -0.32
COPB1-209ENST00000533096 STRADAQ7RTN6 431 aa13.07□□□□□ -0.32
COPB1-209ENST00000533096 UNC5BQ8IZJ1 945 aa13.07□□□□□ -0.32
COPB1-209ENST00000533096 PELI3Q8N2H9 469 aa13.07□□□□□ -0.32
COPB1-209ENST00000533096 SELENOOQ9BVL4 669 aa13.07□□□□□ -0.32
COPB1-209ENST00000533096 STK33Q9BYT3 514 aa13.07□□□□□ -0.32
COPB1-209ENST00000533096 WDR26Q9H7D7 661 aa13.07□□□□□ -0.32
COPB1-209ENST00000533096 CATSPERBQ9H7T0 1116 aa13.07□□□□□ -0.32
COPB1-209ENST00000533096 OCIAD1Q9NX40 245 aa13.07□□□□□ -0.32
COPB1-209ENST00000533096 KIAA1468Q9P260 1216 aa13.07□□□□□ -0.32
COPB1-209ENST00000533096 PRSS38A1L453 326 aa13.06□□□□□ -0.32
COPB1-209ENST00000533096 PDE2AO00408 941 aaPredicted RBP13.06□□□□□ -0.32
COPB1-209ENST00000533096 TNFRSF10CO14798 259 aa13.06□□□□□ -0.32
COPB1-209ENST00000533096 RAD1O60671 282 aa13.06□□□□□ -0.32
COPB1-209ENST00000533096 FUCA1P04066 466 aa13.06□□□□□ -0.32
COPB1-209ENST00000533096 CCNB1P14635 433 aa13.06□□□□□ -0.32
COPB1-209ENST00000533096 CHRNB2P17787 502 aa13.06□□□□□ -0.32
COPB1-209ENST00000533096 MMP12P39900 470 aa13.06□□□□□ -0.32
COPB1-209ENST00000533096 STAT1P42224 750 aa13.06□□□□□ -0.32
COPB1-209ENST00000533096 PTPN9P43378 593 aa13.06□□□□□ -0.32
COPB1-209ENST00000533096 PAPOLAP51003 745 aaKnown RBP13.06□□□□□ -0.32
COPB1-209ENST00000533096 ARSDP51689 593 aa13.06□□□□□ -0.32
COPB1-209ENST00000533096 KIAA1024LP59773 190 aa13.06□□□□□ -0.32
COPB1-209ENST00000533096 BCL2L1Q07817 233 aa13.06□□□□□ -0.32
COPB1-209ENST00000533096 ILF3Q12906 894 aaKnown RBP eCLIP13.06□□□□□ -0.32
COPB1-209ENST00000533096 RALGDSQ12967 914 aa13.06□□□□□ -0.32
COPB1-209ENST00000533096 GRM3Q14832 879 aa13.06□□□□□ -0.32
COPB1-209ENST00000533096 DEFB109BQ30KR1 87 aa13.06□□□□□ -0.32
COPB1-209ENST00000533096 PARP15Q460N3 678 aa13.06□□□□□ -0.32
COPB1-209ENST00000533096 C16orf46Q6P387 395 aa13.06□□□□□ -0.32
COPB1-209ENST00000533096 KDELC2Q7Z4H8 507 aa13.06□□□□□ -0.32
COPB1-209ENST00000533096 NRROSQ86YC3 692 aa13.06□□□□□ -0.32
COPB1-209ENST00000533096 FAM114A1Q8IWE2 563 aa13.06□□□□□ -0.32
COPB1-209ENST00000533096 TSEN2Q8NCE0 465 aaKnown RBP13.06□□□□□ -0.32
COPB1-209ENST00000533096 AGBL5Q8NDL9 886 aa13.06□□□□□ -0.32
COPB1-209ENST00000533096 CENPIQ92674 756 aaPredicted RBP13.06□□□□□ -0.32
COPB1-209ENST00000533096 RNF31Q96EP0 1072 aa13.06□□□□□ -0.32
COPB1-209ENST00000533096 CTRCQ99895 268 aa13.06□□□□□ -0.32
COPB1-209ENST00000533096 GSDMCQ9BYG8 508 aa13.06□□□□□ -0.32
COPB1-209ENST00000533096 SLC39A8Q9C0K1 460 aa13.06□□□□□ -0.32
COPB1-209ENST00000533096 ATP13A3Q9H7F0 1226 aa13.06□□□□□ -0.32
COPB1-209ENST00000533096 SEPT11Q9NVA2 429 aaKnown RBP13.06□□□□□ -0.32
COPB1-209ENST00000533096 ADAM22Q9P0K1 906 aa13.06□□□□□ -0.32
COPB1-209ENST00000533096 TAAR2Q9P1P5 351 aa13.06□□□□□ -0.32
COPB1-209ENST00000533096 NEU3Q9UQ49 428 aa13.06□□□□□ -0.32
COPB1-209ENST00000533096 PLAAQ9Y263 795 aa13.06□□□□□ -0.32
COPB1-209ENST00000533096 PLEKHM1Q9Y4G2 1056 aa13.06□□□□□ -0.32
COPB1-209ENST00000533096 TSPAN11A1L157 253 aa13.05□□□□□ -0.32
COPB1-209ENST00000533096 EFCAB7A8K855 629 aa13.05□□□□□ -0.32
COPB1-209ENST00000533096 PPM1DO15297 605 aa13.05□□□□□ -0.32
COPB1-209ENST00000533096 DAPK3O43293 454 aa13.05□□□□□ -0.32
COPB1-209ENST00000533096 CYP1A1P04798 512 aaPredicted RBP13.05□□□□□ -0.32
COPB1-209ENST00000533096 CR2P20023 1033 aa13.05□□□□□ -0.32
COPB1-209ENST00000533096 SERPINA4P29622 427 aa13.05□□□□□ -0.32
COPB1-209ENST00000533096 TRIM23P36406 574 aa13.05□□□□□ -0.32
COPB1-209ENST00000533096 SCNN1BP51168 640 aa13.05□□□□□ -0.32
COPB1-209ENST00000533096 LIMK2P53671 638 aa13.05□□□□□ -0.32
COPB1-209ENST00000533096 POLR2LP62875 67 aaKnown RBP13.05□□□□□ -0.32
COPB1-209ENST00000533096 FOXK1P85037 733 aa13.05□□□□□ -0.32
COPB1-209ENST00000533096 CDR2Q01850 454 aa13.05□□□□□ -0.32
COPB1-209ENST00000533096 AGERQ15109 404 aa13.05□□□□□ -0.32
COPB1-209ENST00000533096 TSR1Q2NL82 804 aaKnown RBP13.05□□□□□ -0.32
COPB1-209ENST00000533096 MIIPQ5JXC2 388 aa13.05□□□□□ -0.32
COPB1-209ENST00000533096 DCAF12Q5T6F0 453 aa13.05□□□□□ -0.32
COPB1-209ENST00000533096 ANKS6Q68DC2 871 aa13.05□□□□□ -0.32
COPB1-209ENST00000533096 DOK6Q6PKX4 331 aa13.05□□□□□ -0.32
COPB1-209ENST00000533096 ZNF761Q86XN6 746 aaPredicted RBP13.05□□□□□ -0.32
COPB1-209ENST00000533096 UMODL1-AS1Q8N2C9 162 aa13.05□□□□□ -0.32
COPB1-209ENST00000533096 MLKLQ8NB16 471 aa13.05□□□□□ -0.32
COPB1-209ENST00000533096 CCDC112Q8NEF3 446 aa13.05□□□□□ -0.32
COPB1-209ENST00000533096 C9orf43Q8TAL5 461 aaPredicted RBP13.05□□□□□ -0.32
COPB1-209ENST00000533096 EPS8L1Q8TE68 723 aa13.05□□□□□ -0.32
COPB1-209ENST00000533096 PDCD6IPQ8WUM4 868 aaKnown RBP13.05□□□□□ -0.32
COPB1-209ENST00000533096 PTCD2Q8WV60 388 aaKnown RBP13.05□□□□□ -0.32
COPB1-209ENST00000533096 NTAN1Q96AB6 310 aa13.05□□□□□ -0.32
COPB1-209ENST00000533096 AHCYL2Q96HN2 611 aaKnown RBP13.05□□□□□ -0.32
COPB1-209ENST00000533096 PCDHB18PQ96TA0 734 aa13.05□□□□□ -0.32
COPB1-209ENST00000533096 NAA15Q9BXJ9 866 aaKnown RBP13.05□□□□□ -0.32
COPB1-209ENST00000533096 GPN2Q9H9Y4 310 aaPredicted RBP13.05□□□□□ -0.32
COPB1-209ENST00000533096 LRRC4CQ9HCJ2 640 aa13.05□□□□□ -0.32
COPB1-209ENST00000533096 GPATCH2LQ9NWQ4 482 aa13.05□□□□□ -0.32
COPB1-209ENST00000533096 KCNK4Q9NYG8 393 aa13.05□□□□□ -0.32
COPB1-209ENST00000533096 TMEM9Q9P0T7 183 aa13.05□□□□□ -0.32
COPB1-209ENST00000533096 MAN2B2Q9Y2E5 1009 aa13.05□□□□□ -0.32
COPB1-209ENST00000533096 NYNRINQ9P2P1 1898 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms