RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 EPB41L5Q9HCM4 733 aa17.88■□□□□ 0.45
PCF11-206ENST00000533018 MRPL40Q9NQ50 206 aaKnown RBP17.88■□□□□ 0.45
PCF11-206ENST00000533018 PCDHGC4Q9Y5F7 938 aa17.88■□□□□ 0.45
PCF11-206ENST00000533018 CCDC187A0A096LP49 1063 aa17.87■□□□□ 0.45
PCF11-206ENST00000533018 TRAFD1O14545 582 aaPredicted RBP17.87■□□□□ 0.45
PCF11-206ENST00000533018 TNFSF15O95150 251 aa17.87■□□□□ 0.45
PCF11-206ENST00000533018 RPLP0P05388 317 aaKnown RBP17.87■□□□□ 0.45
PCF11-206ENST00000533018 IL1R2P27930 398 aa17.87■□□□□ 0.45
PCF11-206ENST00000533018 SSR1P43307 286 aaKnown RBP17.87■□□□□ 0.45
PCF11-206ENST00000533018 KIAA1024LP59773 190 aa17.87■□□□□ 0.45
PCF11-206ENST00000533018 TPM4P67936 248 aa17.87■□□□□ 0.45
PCF11-206ENST00000533018 CCL7P80098 99 aa17.87■□□□□ 0.45
PCF11-206ENST00000533018 NR1I3Q14994 352 aa17.87■□□□□ 0.45
PCF11-206ENST00000533018 DPYSL2Q16555 572 aa17.87■□□□□ 0.45
PCF11-206ENST00000533018 KCTD16Q68DU8 428 aa17.87■□□□□ 0.45
PCF11-206ENST00000533018 POLNQ7Z5Q5 900 aa17.87■□□□□ 0.45
PCF11-206ENST00000533018 Q8N9G6 341 aaPredicted RBP17.87■□□□□ 0.45
PCF11-206ENST00000533018 FAM46DQ8NEK8 389 aa17.87■□□□□ 0.45
PCF11-206ENST00000533018 OR6C4Q8NGE1 309 aa17.87■□□□□ 0.45
PCF11-206ENST00000533018 OR1E3Q8WZA6 343 aa17.87■□□□□ 0.45
PCF11-206ENST00000533018 CCDC97Q96F63 343 aaPredicted RBP17.87■□□□□ 0.45
PCF11-206ENST00000533018 RBM15Q96T37 977 aaKnown RBP eCLIP17.87■□□□□ 0.457e-17■■■■■ 41.5
PCF11-206ENST00000533018 DPH1Q9BZG8 443 aa17.87■□□□□ 0.45
PCF11-206ENST00000533018 ISCUQ9H1K1 167 aa17.87■□□□□ 0.45
PCF11-206ENST00000533018 DPEP2Q9H4A9 486 aa17.87■□□□□ 0.45
PCF11-206ENST00000533018 WDR26Q9H7D7 661 aa17.87■□□□□ 0.45
PCF11-206ENST00000533018 CYP4F12Q9HCS2 524 aa17.87■□□□□ 0.45
PCF11-206ENST00000533018 ETNK2Q9NVF9 386 aa17.87■□□□□ 0.45
PCF11-206ENST00000533018 B4GALT6Q9UBX8 382 aa17.87■□□□□ 0.45
PCF11-206ENST00000533018 RABGEF1Q9UJ41 708 aa17.87■□□□□ 0.45
PCF11-206ENST00000533018 PCDHGA8Q9Y5G5 932 aa17.87■□□□□ 0.45
PCF11-206ENST00000533018 DGKBQ9Y6T7 804 aa17.87■□□□□ 0.45
PCF11-206ENST00000533018 ARHGEF17Q96PE2 2063 aaPredicted RBP17.87■□□□□ 0.45
PCF11-206ENST00000533018 PMS2P1A4D2B8 440 aa17.86■□□□□ 0.45
PCF11-206ENST00000533018 GOLGA6CA6NDK9 693 aa17.86■□□□□ 0.45
PCF11-206ENST00000533018 GOLGA6BA6NDN3 693 aa17.86■□□□□ 0.45
PCF11-206ENST00000533018 TK2O00142 265 aa17.86■□□□□ 0.45
PCF11-206ENST00000533018 GOLGA6DP0CG33 693 aa17.86■□□□□ 0.45
PCF11-206ENST00000533018 TCF4P15884 667 aa17.86■□□□□ 0.45
PCF11-206ENST00000533018 NFKBIAP25963 317 aa17.86■□□□□ 0.45
PCF11-206ENST00000533018 PIGHQ14442 188 aaPredicted RBP17.86■□□□□ 0.45
PCF11-206ENST00000533018 KRT81Q14533 505 aa17.86■□□□□ 0.45
PCF11-206ENST00000533018 NFKBIBQ15653 356 aa17.86■□□□□ 0.45
PCF11-206ENST00000533018 TAF1BQ53T94 588 aaPredicted RBP17.86■□□□□ 0.45
PCF11-206ENST00000533018 PNCKQ6P2M8 343 aa17.86■□□□□ 0.45
PCF11-206ENST00000533018 ATPAF2Q8N5M1 289 aa17.86■□□□□ 0.45
PCF11-206ENST00000533018 CPLX3Q8WVH0 158 aa17.86■□□□□ 0.45
PCF11-206ENST00000533018 NUS1Q96E22 293 aa17.86■□□□□ 0.45
PCF11-206ENST00000533018 BTBD6Q96KE9 485 aa17.86■□□□□ 0.45
PCF11-206ENST00000533018 NSMCE3Q96MG7 304 aa17.86■□□□□ 0.45
PCF11-206ENST00000533018 CSPG4P5Q96PW8 444 aa17.86■□□□□ 0.45
PCF11-206ENST00000533018 LGR4Q9BXB1 951 aa17.86■□□□□ 0.45
PCF11-206ENST00000533018 FOXP3Q9BZS1 431 aa17.86■□□□□ 0.45
PCF11-206ENST00000533018 FGF22Q9HCT0 170 aa17.86■□□□□ 0.45
PCF11-206ENST00000533018 GOLGA6AQ9NYA3 693 aa17.86■□□□□ 0.45
PCF11-206ENST00000533018 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.86■□□□□ 0.45
PCF11-206ENST00000533018 A0A1W2PQ67 120 aa17.85■□□□□ 0.45
PCF11-206ENST00000533018 B4DGG1 531 aa17.85■□□□□ 0.45
PCF11-206ENST00000533018 AGRPO00253 132 aa17.85■□□□□ 0.45
PCF11-206ENST00000533018 PDE2AO00408 941 aaPredicted RBP17.85■□□□□ 0.45
PCF11-206ENST00000533018 NTN3O00634 580 aaPredicted RBP17.85■□□□□ 0.45
PCF11-206ENST00000533018 CPP00450 1065 aa17.85■□□□□ 0.45
PCF11-206ENST00000533018 RARAP10276 462 aa17.85■□□□□ 0.45
PCF11-206ENST00000533018 HSPA9P38646 679 aaKnown RBP17.85■□□□□ 0.45
PCF11-206ENST00000533018 PDX1P52945 283 aa17.85■□□□□ 0.45
PCF11-206ENST00000533018 MAXP61244 160 aa17.85■□□□□ 0.45
PCF11-206ENST00000533018 IGF2-ASQ6U949 168 aa17.85■□□□□ 0.45
PCF11-206ENST00000533018 B3GNT8Q7Z7M8 397 aa17.85■□□□□ 0.45
PCF11-206ENST00000533018 FBXO39Q8N4B4 442 aa17.85■□□□□ 0.45
PCF11-206ENST00000533018 PRR11Q96HE9 360 aaPredicted RBP17.85■□□□□ 0.45
PCF11-206ENST00000533018 NUDCD1Q96RS6 583 aa17.85■□□□□ 0.45
PCF11-206ENST00000533018 STRADBQ9C0K7 418 aa17.85■□□□□ 0.45
PCF11-206ENST00000533018 TMEM168Q9H0V1 697 aa17.85■□□□□ 0.45
PCF11-206ENST00000533018 THAP2Q9H0W7 228 aa17.85■□□□□ 0.45
PCF11-206ENST00000533018 LRRN3Q9H3W5 708 aa17.85■□□□□ 0.45
PCF11-206ENST00000533018 NOD2Q9HC29 1040 aa17.85■□□□□ 0.45
PCF11-206ENST00000533018 ANAPC7Q9UJX3 599 aa17.85■□□□□ 0.45
PCF11-206ENST00000533018 BZW2Q9Y6E2 419 aaKnown RBP17.85■□□□□ 0.45
PCF11-206ENST00000533018 TMX2-CTNND1H3BSU7 103 aa17.84■□□□□ 0.45
PCF11-206ENST00000533018 TNFRSF10CO14798 259 aa17.84■□□□□ 0.45
PCF11-206ENST00000533018 MAFKO60675 156 aa17.84■□□□□ 0.45
PCF11-206ENST00000533018 SOCS5O75159 536 aa17.84■□□□□ 0.45
PCF11-206ENST00000533018 CYP2A6P11509 494 aaPredicted RBP17.84■□□□□ 0.45
PCF11-206ENST00000533018 GM2AP17900 193 aa17.84■□□□□ 0.45
PCF11-206ENST00000533018 VIPR1P32241 457 aa17.84■□□□□ 0.45
PCF11-206ENST00000533018 SERPINB6P35237 376 aa17.84■□□□□ 0.45
PCF11-206ENST00000533018 TRIM23P36406 574 aa17.84■□□□□ 0.45
PCF11-206ENST00000533018 INHBCP55103 352 aa17.84■□□□□ 0.45
PCF11-206ENST00000533018 ITKQ08881 620 aa17.84■□□□□ 0.45
PCF11-206ENST00000533018 ARHGEF7Q14155 803 aa17.84■□□□□ 0.45
PCF11-206ENST00000533018 IQCB1Q15051 598 aa17.84■□□□□ 0.45
PCF11-206ENST00000533018 FIGNQ5HY92 759 aa17.84■□□□□ 0.45
PCF11-206ENST00000533018 MARC1Q5VT66 337 aa17.84■□□□□ 0.45
PCF11-206ENST00000533018 TXNRD3NBQ6F5E7 133 aa17.84■□□□□ 0.45
PCF11-206ENST00000533018 RAB11FIP2Q7L804 512 aa17.84■□□□□ 0.45
PCF11-206ENST00000533018 JAMLQ86YT9 394 aa17.84■□□□□ 0.45
PCF11-206ENST00000533018 CCNJLQ8IV13 435 aa17.84■□□□□ 0.45
PCF11-206ENST00000533018 PELI3Q8N2H9 469 aa17.84■□□□□ 0.45
PCF11-206ENST00000533018 PGBD5Q8N414 524 aa17.84■□□□□ 0.45
PCF11-206ENST00000533018 GPR156Q8NFN8 814 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms