RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 SLC13A1Q9BZW2 595 aa19.02■□□□□ 0.64
SSH3-209ENST00000532600 B4GALT6Q9UBX8 382 aa19.02■□□□□ 0.64
SSH3-209ENST00000532600 AK5Q9Y6K8 562 aa19.02■□□□□ 0.64
SSH3-209ENST00000532600 A0A0U1RQJ8 604 aa19.01■□□□□ 0.63
SSH3-209ENST00000532600 A0A1W2PNU3 283 aaPredicted RBP19.01■□□□□ 0.63
SSH3-209ENST00000532600 CPED1A4D0V7 1026 aa19.01■□□□□ 0.63
SSH3-209ENST00000532600 GOLGA6L6A8MZA4 724 aa19.01■□□□□ 0.63
SSH3-209ENST00000532600 MYO1FO00160 1098 aa19.01■□□□□ 0.63
SSH3-209ENST00000532600 MFSD11O43934 449 aa19.01■□□□□ 0.63
SSH3-209ENST00000532600 BRINP1O60477 761 aa19.01■□□□□ 0.63
SSH3-209ENST00000532600 DUSP3P51452 185 aaPredicted RBP19.01■□□□□ 0.63
SSH3-209ENST00000532600 CCZ1BP86790 482 aa19.01■□□□□ 0.63
SSH3-209ENST00000532600 CCZ1P86791 482 aaPredicted RBP19.01■□□□□ 0.63
SSH3-209ENST00000532600 MTM1Q13496 603 aa19.01■□□□□ 0.63
SSH3-209ENST00000532600 ZNF235Q14590 738 aa19.01■□□□□ 0.63
SSH3-209ENST00000532600 NCBP2-AS2Q69YL0 99 aa19.01■□□□□ 0.63
SSH3-209ENST00000532600 ENPP7Q6UWV6 458 aa19.01■□□□□ 0.63
SSH3-209ENST00000532600 EFL1Q7Z2Z2 1120 aaKnown RBP19.01■□□□□ 0.63
SSH3-209ENST00000532600 HID1Q8IV36 788 aa19.01■□□□□ 0.63
SSH3-209ENST00000532600 LRRC8AQ8IWT6 810 aa19.01■□□□□ 0.63
SSH3-209ENST00000532600 CBARPQ8N350 705 aaPredicted RBP19.01■□□□□ 0.63
SSH3-209ENST00000532600 TEX26Q8N6G2 289 aa19.01■□□□□ 0.63
SSH3-209ENST00000532600 PDXPQ96GD0 296 aa19.01■□□□□ 0.63
SSH3-209ENST00000532600 COQ10AQ96MF6 247 aa19.01■□□□□ 0.63
SSH3-209ENST00000532600 DESI2Q9BSY9 194 aa19.01■□□□□ 0.63
SSH3-209ENST00000532600 CTTNBP2NLQ9P2B4 639 aa19.01■□□□□ 0.63
SSH3-209ENST00000532600 INTUQ9ULD6 942 aa19.01■□□□□ 0.63
SSH3-209ENST00000532600 TMEM202A6NGA9 273 aa19■□□□□ 0.63
SSH3-209ENST00000532600 TMEM110-MUSTN1A8MSY1 372 aa19■□□□□ 0.63
SSH3-209ENST00000532600 PROSCO94903 275 aa19■□□□□ 0.63
SSH3-209ENST00000532600 ELFN1P0C7U0 828 aa19■□□□□ 0.63
SSH3-209ENST00000532600 LHCGRP22888 699 aa19■□□□□ 0.63
SSH3-209ENST00000532600 HSPA9P38646 679 aaKnown RBP19■□□□□ 0.63
SSH3-209ENST00000532600 SRP54P61011 504 aaKnown RBP19■□□□□ 0.63
SSH3-209ENST00000532600 KRT81Q14533 505 aa19■□□□□ 0.63
SSH3-209ENST00000532600 NR0B2Q15466 257 aa19■□□□□ 0.63
SSH3-209ENST00000532600 CNGA3Q16281 694 aa19■□□□□ 0.63
SSH3-209ENST00000532600 CRTC1Q6UUV9 634 aa19■□□□□ 0.63
SSH3-209ENST00000532600 PDZD3Q86UT5 571 aa19■□□□□ 0.63
SSH3-209ENST00000532600 ATPAF2Q8N5M1 289 aa19■□□□□ 0.63
SSH3-209ENST00000532600 SLC35G2Q8TBE7 412 aa19■□□□□ 0.63
SSH3-209ENST00000532600 MAPK15Q8TD08 544 aa19■□□□□ 0.63
SSH3-209ENST00000532600 LRRN4Q8WUT4 740 aa19■□□□□ 0.63
SSH3-209ENST00000532600 OR1E3Q8WZA6 343 aa19■□□□□ 0.63
SSH3-209ENST00000532600 SMIM14Q96QK8 99 aa19■□□□□ 0.63
SSH3-209ENST00000532600 LGR4Q9BXB1 951 aa19■□□□□ 0.63
SSH3-209ENST00000532600 FGF22Q9HCT0 170 aa19■□□□□ 0.63
SSH3-209ENST00000532600 RCOR3Q9P2K3 495 aaPredicted RBP19■□□□□ 0.63
SSH3-209ENST00000532600 A0A0U1RQS6 177 aa18.99■□□□□ 0.63
SSH3-209ENST00000532600 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.99■□□□□ 0.63
SSH3-209ENST00000532600 SOCS5O75159 536 aa18.99■□□□□ 0.63
SSH3-209ENST00000532600 CSO75390 466 aaKnown RBP18.99■□□□□ 0.63
SSH3-209ENST00000532600 MTA2O94776 668 aa18.99■□□□□ 0.63
SSH3-209ENST00000532600 MAP3K6O95382 1288 aa18.99■□□□□ 0.63
SSH3-209ENST00000532600 ANXA6P08133 673 aa18.99■□□□□ 0.63
SSH3-209ENST00000532600 ITPKBP27987 946 aa18.99■□□□□ 0.63
SSH3-209ENST00000532600 TRIM23P36406 574 aa18.99■□□□□ 0.63
SSH3-209ENST00000532600 EIF2S3P41091 472 aaKnown RBP18.99■□□□□ 0.63
SSH3-209ENST00000532600 MMP13P45452 471 aa18.99■□□□□ 0.63
SSH3-209ENST00000532600 KIAA1024LP59773 190 aa18.99■□□□□ 0.63
SSH3-209ENST00000532600 POLR2LP62875 67 aaKnown RBP18.99■□□□□ 0.63
SSH3-209ENST00000532600 GALNT2Q10471 571 aa18.99■□□□□ 0.63
SSH3-209ENST00000532600 PAFAH1B3Q15102 231 aaKnown RBP18.99■□□□□ 0.63
SSH3-209ENST00000532600 TCEAL1Q15170 157 aa18.99■□□□□ 0.63
SSH3-209ENST00000532600 SPA17Q15506 151 aa18.99■□□□□ 0.63
SSH3-209ENST00000532600 PQLC3Q8N755 202 aa18.99■□□□□ 0.63
SSH3-209ENST00000532600 KYQ8NBH2 561 aa18.99■□□□□ 0.63
SSH3-209ENST00000532600 WDR92Q96MX6 357 aa18.99■□□□□ 0.63
SSH3-209ENST00000532600 DCBLD2Q96PD2 775 aa18.99■□□□□ 0.63
SSH3-209ENST00000532600 LACRTQ9GZZ8 138 aa18.99■□□□□ 0.63
SSH3-209ENST00000532600 MRPL40Q9NQ50 206 aaKnown RBP18.99■□□□□ 0.63
SSH3-209ENST00000532600 UVRAGQ9P2Y5 699 aa18.99■□□□□ 0.63
SSH3-209ENST00000532600 HEXIM1O94992 359 aaKnown RBP18.98■□□□□ 0.63
SSH3-209ENST00000532600 RASGRP1O95267 797 aa18.98■□□□□ 0.63
SSH3-209ENST00000532600 CPP00450 1065 aa18.98■□□□□ 0.63
SSH3-209ENST00000532600 SERPINB6P35237 376 aa18.98■□□□□ 0.63
SSH3-209ENST00000532600 GJC1P36383 396 aa18.98■□□□□ 0.63
SSH3-209ENST00000532600 SSR1P43307 286 aaKnown RBP18.98■□□□□ 0.63
SSH3-209ENST00000532600 PDX1P52945 283 aa18.98■□□□□ 0.63
SSH3-209ENST00000532600 ANKRD20A8PQ5CZ79 823 aa18.98■□□□□ 0.63
SSH3-209ENST00000532600 MARC1Q5VT66 337 aa18.98■□□□□ 0.63
SSH3-209ENST00000532600 ESRP1Q6NXG1 681 aaKnown RBP18.98■□□□□ 0.63
SSH3-209ENST00000532600 RD3Q7Z3Z2 195 aa18.98■□□□□ 0.63
SSH3-209ENST00000532600 HSD11B1LQ7Z5J1 315 aa18.98■□□□□ 0.63
SSH3-209ENST00000532600 SFTPA2Q8IWL1 248 aa18.98■□□□□ 0.63
SSH3-209ENST00000532600 FSTL5Q8N475 847 aaPredicted RBP18.98■□□□□ 0.63
SSH3-209ENST00000532600 SNIP1Q8TAD8 396 aaKnown RBP18.98■□□□□ 0.63
SSH3-209ENST00000532600 PDCD6IPQ8WUM4 868 aaKnown RBP18.98■□□□□ 0.63
SSH3-209ENST00000532600 PIH1D2Q8WWB5 315 aa18.98■□□□□ 0.63
SSH3-209ENST00000532600 MAML1Q92585 1016 aa18.98■□□□□ 0.63
SSH3-209ENST00000532600 FAF2Q96CS3 445 aa18.98■□□□□ 0.63
SSH3-209ENST00000532600 NT5MQ9NPB1 228 aa18.98■□□□□ 0.63
SSH3-209ENST00000532600 NCKIPSDQ9NZQ3 722 aa18.98■□□□□ 0.63
SSH3-209ENST00000532600 KLQ9UEF7 1012 aa18.98■□□□□ 0.63
SSH3-209ENST00000532600 RABGEF1Q9UJ41 708 aa18.98■□□□□ 0.63
SSH3-209ENST00000532600 DGKBQ9Y6T7 804 aa18.98■□□□□ 0.63
SSH3-209ENST00000532600 DUSP10Q9Y6W6 482 aa18.98■□□□□ 0.63
SSH3-209ENST00000532600 LOC400499M0QZD8 3231 aa18.98■□□□□ 0.63
SSH3-209ENST00000532600 PMS2P1A4D2B8 440 aa18.97■□□□□ 0.63
SSH3-209ENST00000532600 NPIPB15A6NHN6 443 aaPredicted RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms