RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 HOXC4P09017 264 aaPredicted RBP12.86□□□□□ -0.35
TM9SF1-211ENST00000531406 ELFN1P0C7U0 828 aa12.86□□□□□ -0.35
TM9SF1-211ENST00000531406 MIPP30301 263 aa12.86□□□□□ -0.35
TM9SF1-211ENST00000531406 UGT1A5P35504 534 aa12.86□□□□□ -0.35
TM9SF1-211ENST00000531406 HCAR3P49019 387 aa12.86□□□□□ -0.35
TM9SF1-211ENST00000531406 INHBCP55103 352 aa12.86□□□□□ -0.35
TM9SF1-211ENST00000531406 POLR2LP62875 67 aaKnown RBP12.86□□□□□ -0.35
TM9SF1-211ENST00000531406 IL10RBQ08334 325 aa12.86□□□□□ -0.35
TM9SF1-211ENST00000531406 EIF3IQ13347 325 aaKnown RBP12.86□□□□□ -0.35
TM9SF1-211ENST00000531406 PPP6R3Q5H9R7 873 aaPredicted RBP12.86□□□□□ -0.35
TM9SF1-211ENST00000531406 INO80CQ6PI98 192 aaPredicted RBP12.86□□□□□ -0.35
TM9SF1-211ENST00000531406 CYP4V2Q6ZWL3 525 aaPredicted RBP12.86□□□□□ -0.35
TM9SF1-211ENST00000531406 TAF8Q7Z7C8 310 aa12.86□□□□□ -0.35
TM9SF1-211ENST00000531406 PSTKQ8IV42 348 aaKnown RBP12.86□□□□□ -0.35
TM9SF1-211ENST00000531406 NPWQ8N729 165 aa12.86□□□□□ -0.35
TM9SF1-211ENST00000531406 PAF1Q8N7H5 531 aa12.86□□□□□ -0.35
TM9SF1-211ENST00000531406 Q8N9G6 341 aaPredicted RBP12.86□□□□□ -0.35
TM9SF1-211ENST00000531406 FAM46DQ8NEK8 389 aa12.86□□□□□ -0.35
TM9SF1-211ENST00000531406 TMEM74Q96NL1 305 aa12.86□□□□□ -0.35
TM9SF1-211ENST00000531406 PSKH2Q96QS6 385 aa12.86□□□□□ -0.35
TM9SF1-211ENST00000531406 FOXP3Q9BZS1 431 aa12.86□□□□□ -0.35
TM9SF1-211ENST00000531406 TRIM7Q9C029 511 aa12.86□□□□□ -0.35
TM9SF1-211ENST00000531406 STRADBQ9C0K7 418 aa12.86□□□□□ -0.35
TM9SF1-211ENST00000531406 LRRN3Q9H3W5 708 aa12.86□□□□□ -0.35
TM9SF1-211ENST00000531406 SP110Q9HB58 689 aa12.86□□□□□ -0.35
TM9SF1-211ENST00000531406 IFNKQ9P0W0 207 aa12.86□□□□□ -0.35
TM9SF1-211ENST00000531406 APPL1Q9UKG1 709 aa12.86□□□□□ -0.35
TM9SF1-211ENST00000531406 PCDHGA7Q9Y5G6 932 aa12.86□□□□□ -0.35
TM9SF1-211ENST00000531406 CHD5Q8TDI0 1954 aa12.86□□□□□ -0.35
TM9SF1-211ENST00000531406 SETXQ7Z333 2677 aaKnown RBP12.85□□□□□ -0.35
TM9SF1-211ENST00000531406 COL27A1Q8IZC6 1860 aaPredicted RBP12.85□□□□□ -0.35
TM9SF1-211ENST00000531406 A0A1B0GTH6 734 aa12.85□□□□□ -0.35
TM9SF1-211ENST00000531406 LRRC53A6NM62 1247 aa12.85□□□□□ -0.35
TM9SF1-211ENST00000531406 A8MX80 341 aa12.85□□□□□ -0.35
TM9SF1-211ENST00000531406 GOLGA6L6A8MZA4 724 aa12.85□□□□□ -0.35
TM9SF1-211ENST00000531406 TNFRSF10CO14798 259 aa12.85□□□□□ -0.35
TM9SF1-211ENST00000531406 PRPSAP2O60256 369 aa12.85□□□□□ -0.35
TM9SF1-211ENST00000531406 NOBOXO60393 691 aa12.85□□□□□ -0.35
TM9SF1-211ENST00000531406 RNF8O76064 485 aa12.85□□□□□ -0.35
TM9SF1-211ENST00000531406 FTLP02792 175 aaPredicted RBP12.85□□□□□ -0.35
TM9SF1-211ENST00000531406 HGFP14210 728 aa12.85□□□□□ -0.35
TM9SF1-211ENST00000531406 GLB1P16278 677 aa12.85□□□□□ -0.35
TM9SF1-211ENST00000531406 GM2AP17900 193 aa12.85□□□□□ -0.35
TM9SF1-211ENST00000531406 KELP23276 732 aa12.85□□□□□ -0.35
TM9SF1-211ENST00000531406 SLC5A2P31639 672 aa12.85□□□□□ -0.35
TM9SF1-211ENST00000531406 CCKBRP32239 447 aa12.85□□□□□ -0.35
TM9SF1-211ENST00000531406 TRIM23P36406 574 aa12.85□□□□□ -0.35
TM9SF1-211ENST00000531406 SCNN1BP51168 640 aa12.85□□□□□ -0.35
TM9SF1-211ENST00000531406 ZNF75DP51815 510 aa12.85□□□□□ -0.35
TM9SF1-211ENST00000531406 ZNF135P52742 658 aaPredicted RBP12.85□□□□□ -0.35
TM9SF1-211ENST00000531406 AP1S1P61966 158 aa12.85□□□□□ -0.35
TM9SF1-211ENST00000531406 LY6DQ14210 128 aa12.85□□□□□ -0.35
TM9SF1-211ENST00000531406 KIAA1614Q5VZ46 1190 aa12.85□□□□□ -0.35
TM9SF1-211ENST00000531406 CCDC81Q6ZN84 652 aa12.85□□□□□ -0.35
TM9SF1-211ENST00000531406 CCNJLQ8IV13 435 aa12.85□□□□□ -0.35
TM9SF1-211ENST00000531406 SFTPA2Q8IWL1 248 aa12.85□□□□□ -0.35
TM9SF1-211ENST00000531406 TP53INP2Q8IXH6 220 aa12.85□□□□□ -0.35
TM9SF1-211ENST00000531406 MRFAP1L1Q96HT8 127 aa12.85□□□□□ -0.35
TM9SF1-211ENST00000531406 LGR4Q9BXB1 951 aa12.85□□□□□ -0.35
TM9SF1-211ENST00000531406 SEMA4CQ9C0C4 833 aa12.85□□□□□ -0.35
TM9SF1-211ENST00000531406 XPO4Q9C0E2 1151 aaKnown RBP12.85□□□□□ -0.35
TM9SF1-211ENST00000531406 WDR26Q9H7D7 661 aa12.85□□□□□ -0.35
TM9SF1-211ENST00000531406 CYP4F12Q9HCS2 524 aa12.85□□□□□ -0.35
TM9SF1-211ENST00000531406 MRPL40Q9NQ50 206 aaKnown RBP12.85□□□□□ -0.35
TM9SF1-211ENST00000531406 RTN4Q9NQC3 1192 aaKnown RBP12.85□□□□□ -0.35
TM9SF1-211ENST00000531406 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.85□□□□□ -0.35
TM9SF1-211ENST00000531406 CWC15Q9P013 229 aaKnown RBP12.85□□□□□ -0.35
TM9SF1-211ENST00000531406 SEPT3Q9UH03 358 aa12.85□□□□□ -0.35
TM9SF1-211ENST00000531406 ATXN7L1Q9ULK2 861 aaPredicted RBP12.85□□□□□ -0.35
TM9SF1-211ENST00000531406 TDRD6O60522 2096 aaKnown RBP12.85□□□□□ -0.35
TM9SF1-211ENST00000531406 TTC24A2A3L6 582 aaPredicted RBP12.84□□□□□ -0.35
TM9SF1-211ENST00000531406 EFSO43281 561 aa12.84□□□□□ -0.35
TM9SF1-211ENST00000531406 LRCH4O75427 683 aa12.84□□□□□ -0.35
TM9SF1-211ENST00000531406 GZMAP12544 262 aa12.84□□□□□ -0.35
TM9SF1-211ENST00000531406 CDC25BP30305 580 aa12.84□□□□□ -0.35
TM9SF1-211ENST00000531406 RENBPP51606 427 aa12.84□□□□□ -0.35
TM9SF1-211ENST00000531406 SLC10A7Q0GE19 358 aa12.84□□□□□ -0.35
TM9SF1-211ENST00000531406 DPYSQ14117 519 aa12.84□□□□□ -0.35
TM9SF1-211ENST00000531406 LBRQ14739 615 aaKnown RBP12.84□□□□□ -0.35
TM9SF1-211ENST00000531406 ACOX1Q15067 660 aa12.84□□□□□ -0.35
TM9SF1-211ENST00000531406 ASIC2Q16515 512 aa12.84□□□□□ -0.35
TM9SF1-211ENST00000531406 C14orf28Q4W4Y0 310 aa12.84□□□□□ -0.35
TM9SF1-211ENST00000531406 CERCAMQ5T4B2 595 aa12.84□□□□□ -0.35
TM9SF1-211ENST00000531406 TMCO4Q5TGY1 634 aa12.84□□□□□ -0.35
TM9SF1-211ENST00000531406 PNCKQ6P2M8 343 aa12.84□□□□□ -0.35
TM9SF1-211ENST00000531406 ZNF571Q7Z3V5 609 aaPredicted RBP12.84□□□□□ -0.35
TM9SF1-211ENST00000531406 JAMLQ86YT9 394 aa12.84□□□□□ -0.35
TM9SF1-211ENST00000531406 PELI3Q8N2H9 469 aa12.84□□□□□ -0.35
TM9SF1-211ENST00000531406 LZTR1Q8N653 840 aa12.84□□□□□ -0.35
TM9SF1-211ENST00000531406 FNIP1Q8TF40 1166 aa12.84□□□□□ -0.35
TM9SF1-211ENST00000531406 SPOCK2Q92563 424 aa12.84□□□□□ -0.35
TM9SF1-211ENST00000531406 COQ10AQ96MF6 247 aa12.84□□□□□ -0.35
TM9SF1-211ENST00000531406 ZNF599Q96NL3 588 aa12.84□□□□□ -0.35
TM9SF1-211ENST00000531406 CCNL2Q96S94 520 aaPredicted RBP12.84□□□□□ -0.35
TM9SF1-211ENST00000531406 TMEM168Q9H0V1 697 aa12.84□□□□□ -0.35
TM9SF1-211ENST00000531406 AIPL1Q9NZN9 384 aa12.84□□□□□ -0.35
TM9SF1-211ENST00000531406 LRIT1Q9P2V4 623 aa12.84□□□□□ -0.35
TM9SF1-211ENST00000531406 B4GALT6Q9UBX8 382 aa12.84□□□□□ -0.35
TM9SF1-211ENST00000531406 CNOT8Q9UFF9 292 aaKnown RBP12.84□□□□□ -0.35
TM9SF1-211ENST00000531406 RNF215Q9Y6U7 377 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms