RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 OGFOD3Q6PK18 319 aa18.49■□□□□ 0.55
SSSCA1-206ENST00000531405 DPPA4Q7L190 304 aa18.49■□□□□ 0.55
SSSCA1-206ENST00000531405 TP53INP2Q8IXH6 220 aa18.49■□□□□ 0.55
SSSCA1-206ENST00000531405 ARFGAP1Q8N6T3 406 aa18.49■□□□□ 0.55
SSSCA1-206ENST00000531405 NPWQ8N729 165 aa18.49■□□□□ 0.55
SSSCA1-206ENST00000531405 EXD3Q8N9H8 876 aa18.49■□□□□ 0.55
SSSCA1-206ENST00000531405 SNRNP25Q9BV90 132 aaKnown RBP18.49■□□□□ 0.55
SSSCA1-206ENST00000531405 SUDS3Q9H7L9 328 aaPredicted RBP18.49■□□□□ 0.55
SSSCA1-206ENST00000531405 SP110Q9HB58 689 aa18.49■□□□□ 0.55
SSSCA1-206ENST00000531405 CYP4F12Q9HCS2 524 aa18.49■□□□□ 0.55
SSSCA1-206ENST00000531405 LMBRD1Q9NUN5 540 aa18.49■□□□□ 0.55
SSSCA1-206ENST00000531405 LRIT1Q9P2V4 623 aa18.49■□□□□ 0.55
SSSCA1-206ENST00000531405 APPL1Q9UKG1 709 aa18.49■□□□□ 0.55
SSSCA1-206ENST00000531405 SPTA1P02549 2419 aa18.49■□□□□ 0.55
SSSCA1-206ENST00000531405 UBR5O95071 2799 aaPredicted RBP18.48■□□□□ 0.55
SSSCA1-206ENST00000531405 PRAMEF33A0A0G2JMD5 474 aa18.48■□□□□ 0.55
SSSCA1-206ENST00000531405 CFAP69A5D8W1 941 aa18.48■□□□□ 0.55
SSSCA1-206ENST00000531405 TEX33O43247 280 aa18.48■□□□□ 0.55
SSSCA1-206ENST00000531405 SLC28A2O43868 658 aa18.48■□□□□ 0.55
SSSCA1-206ENST00000531405 PRAMEF10O60809 474 aa18.48■□□□□ 0.55
SSSCA1-206ENST00000531405 SCNN1BP51168 640 aa18.48■□□□□ 0.55
SSSCA1-206ENST00000531405 ZFP36L1Q07352 338 aaKnown RBP18.48■□□□□ 0.55
SSSCA1-206ENST00000531405 MAMLD1Q13495 774 aa18.48■□□□□ 0.55
SSSCA1-206ENST00000531405 HLTFQ14527 1009 aaKnown RBP eCLIP18.48■□□□□ 0.55
SSSCA1-206ENST00000531405 ACOX1Q15067 660 aa18.48■□□□□ 0.55
SSSCA1-206ENST00000531405 AFMIDQ63HM1 303 aa18.48■□□□□ 0.55
SSSCA1-206ENST00000531405 SPECC1LQ69YQ0 1117 aa18.48■□□□□ 0.55
SSSCA1-206ENST00000531405 RFX8Q6ZV50 586 aa18.48■□□□□ 0.55
SSSCA1-206ENST00000531405 VASH2Q86V25 355 aa18.48■□□□□ 0.55
SSSCA1-206ENST00000531405 ERGIC2Q96RQ1 377 aa18.48■□□□□ 0.55
SSSCA1-206ENST00000531405 DPEP2Q9H4A9 486 aa18.48■□□□□ 0.55
SSSCA1-206ENST00000531405 DONSONQ9NYP3 566 aa18.48■□□□□ 0.55
SSSCA1-206ENST00000531405 ACSL6Q9UKU0 697 aa18.48■□□□□ 0.55
SSSCA1-206ENST00000531405 TRAFD1O14545 582 aaPredicted RBP18.47■□□□□ 0.55
SSSCA1-206ENST00000531405 NVLO15381 856 aaKnown RBP18.47■□□□□ 0.55
SSSCA1-206ENST00000531405 DAPK3O43293 454 aa18.47■□□□□ 0.55
SSSCA1-206ENST00000531405 LIPCP11150 499 aa18.47■□□□□ 0.55
SSSCA1-206ENST00000531405 DESP17661 470 aa18.47■□□□□ 0.55
SSSCA1-206ENST00000531405 ERCC2P18074 760 aa18.47■□□□□ 0.55
SSSCA1-206ENST00000531405 KELP23276 732 aa18.47■□□□□ 0.55
SSSCA1-206ENST00000531405 TRIM23P36406 574 aa18.47■□□□□ 0.55
SSSCA1-206ENST00000531405 MAPK10P53779 464 aa18.47■□□□□ 0.55
SSSCA1-206ENST00000531405 ARHGEF7Q14155 803 aa18.47■□□□□ 0.55
SSSCA1-206ENST00000531405 LINC00303Q3SY05 128 aa18.47■□□□□ 0.55
SSSCA1-206ENST00000531405 PPP6R3Q5H9R7 873 aaPredicted RBP18.47■□□□□ 0.55
SSSCA1-206ENST00000531405 ERMARDQ5T6L9 678 aa18.47■□□□□ 0.55
SSSCA1-206ENST00000531405 PHF19Q5T6S3 580 aa18.47■□□□□ 0.55
SSSCA1-206ENST00000531405 PNCKQ6P2M8 343 aa18.47■□□□□ 0.55
SSSCA1-206ENST00000531405 CYP4V2Q6ZWL3 525 aaPredicted RBP18.47■□□□□ 0.55
SSSCA1-206ENST00000531405 USP53Q70EK8 1073 aa18.47■□□□□ 0.55
SSSCA1-206ENST00000531405 APTXQ7Z2E3 356 aaKnown RBP18.47■□□□□ 0.55
SSSCA1-206ENST00000531405 ZFAND4Q86XD8 727 aa18.47■□□□□ 0.55
SSSCA1-206ENST00000531405 ANKRD20A12PQ8NF67 263 aa18.47■□□□□ 0.55
SSSCA1-206ENST00000531405 EXTL1Q92935 676 aa18.47■□□□□ 0.55
SSSCA1-206ENST00000531405 SGF29Q96ES7 293 aa18.47■□□□□ 0.55
SSSCA1-206ENST00000531405 TRIM7Q9C029 511 aa18.47■□□□□ 0.55
SSSCA1-206ENST00000531405 SEMA6CQ9H3T2 930 aa18.47■□□□□ 0.55
SSSCA1-206ENST00000531405 WDR26Q9H7D7 661 aa18.47■□□□□ 0.55
SSSCA1-206ENST00000531405 FOXJ2Q9P0K8 574 aa18.47■□□□□ 0.55
SSSCA1-206ENST00000531405 B4GALT6Q9UBX8 382 aa18.47■□□□□ 0.55
SSSCA1-206ENST00000531405 PRSS38A1L453 326 aa18.46■□□□□ 0.55
SSSCA1-206ENST00000531405 TNFRSF10CO14798 259 aa18.46■□□□□ 0.55
SSSCA1-206ENST00000531405 PNLIPP16233 465 aa18.46■□□□□ 0.55
SSSCA1-206ENST00000531405 FERP16591 822 aa18.46■□□□□ 0.55
SSSCA1-206ENST00000531405 MAZP56270 477 aaKnown RBP18.46■□□□□ 0.55
SSSCA1-206ENST00000531405 MYL5Q02045 173 aa18.46■□□□□ 0.55
SSSCA1-206ENST00000531405 IL10RBQ08334 325 aa18.46■□□□□ 0.55
SSSCA1-206ENST00000531405 NFATC3Q12968 1075 aa18.46■□□□□ 0.55
SSSCA1-206ENST00000531405 RBM43Q6ZSC3 357 aaKnown RBP18.46■□□□□ 0.55
SSSCA1-206ENST00000531405 PRICKLE2Q7Z3G6 844 aa18.46■□□□□ 0.55
SSSCA1-206ENST00000531405 IRF2BP2Q7Z5L9 587 aa18.46■□□□□ 0.55
SSSCA1-206ENST00000531405 SLITRK4Q8IW52 837 aa18.46■□□□□ 0.55
SSSCA1-206ENST00000531405 USP7Q93009 1102 aa18.46■□□□□ 0.55
SSSCA1-206ENST00000531405 SYT11Q9BT88 431 aa18.46■□□□□ 0.55
SSSCA1-206ENST00000531405 RDH14Q9HBH5 336 aa18.46■□□□□ 0.55
SSSCA1-206ENST00000531405 SPATS2LQ9NUQ6 558 aaKnown RBP18.46■□□□□ 0.55
SSSCA1-206ENST00000531405 PARVAQ9NVD7 372 aa18.46■□□□□ 0.55
SSSCA1-206ENST00000531405 NAV2Q8IVL1 2488 aa18.45■□□□□ 0.54
SSSCA1-206ENST00000531405 C9orf172C9J069 976 aa18.45■□□□□ 0.54
SSSCA1-206ENST00000531405 NUDT21O43809 227 aaKnown RBP18.45■□□□□ 0.54
SSSCA1-206ENST00000531405 HOXC4P09017 264 aaPredicted RBP18.45■□□□□ 0.54
SSSCA1-206ENST00000531405 CDK11BP21127 795 aaKnown RBP18.45■□□□□ 0.54
SSSCA1-206ENST00000531405 TNFAIP3P21580 790 aa18.45■□□□□ 0.54
SSSCA1-206ENST00000531405 MIPP30301 263 aa18.45■□□□□ 0.54
SSSCA1-206ENST00000531405 POLR2LP62875 67 aaKnown RBP18.45■□□□□ 0.54
SSSCA1-206ENST00000531405 B4GALNT1Q00973 533 aa18.45■□□□□ 0.54
SSSCA1-206ENST00000531405 NSUN2Q08J23 767 aaKnown RBP eCLIP18.45■□□□□ 0.54
SSSCA1-206ENST00000531405 SLC10A7Q0GE19 358 aa18.45■□□□□ 0.54
SSSCA1-206ENST00000531405 C16orf72Q14CZ0 275 aa18.45■□□□□ 0.54
SSSCA1-206ENST00000531405 AMZ1Q400G9 498 aa18.45■□□□□ 0.54
SSSCA1-206ENST00000531405 MAP9Q49MG5 647 aa18.45■□□□□ 0.54
SSSCA1-206ENST00000531405 DENND2CQ68D51 928 aa18.45■□□□□ 0.54
SSSCA1-206ENST00000531405 PLEKHA7Q6IQ23 1121 aa18.45■□□□□ 0.54
SSSCA1-206ENST00000531405 PTCD2Q8WV60 388 aaKnown RBP18.45■□□□□ 0.54
SSSCA1-206ENST00000531405 COL26A1Q96A83 441 aa18.45■□□□□ 0.54
SSSCA1-206ENST00000531405 NUS1Q96E22 293 aa18.45■□□□□ 0.54
SSSCA1-206ENST00000531405 COQ10AQ96MF6 247 aa18.45■□□□□ 0.54
SSSCA1-206ENST00000531405 HSD3B7Q9H2F3 369 aa18.45■□□□□ 0.54
SSSCA1-206ENST00000531405 CARS2Q9HA77 564 aaKnown RBP18.45■□□□□ 0.54
SSSCA1-206ENST00000531405 PCDHGC4Q9Y5F7 938 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms