RNA–Protein interactions for RNA: ENST00000527949.1

NR1H3-230, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2 BASIC

Gene NR1H3, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-230ENST00000527949 CDCP2Q5VXM1 449 aa11.18□□□□□ -0.62
NR1H3-230ENST00000527949 TXNRD3NBQ6F5E7 133 aa11.18□□□□□ -0.62
NR1H3-230ENST00000527949 LIPIQ6XZB0 460 aa11.18□□□□□ -0.62
NR1H3-230ENST00000527949 ARHGAP36Q6ZRI8 547 aa11.18□□□□□ -0.62
NR1H3-230ENST00000527949 ZSWIM9Q86XI8 627 aa11.18□□□□□ -0.62
NR1H3-230ENST00000527949 MAP7D3Q8IWC1 876 aa11.18□□□□□ -0.62
NR1H3-230ENST00000527949 RAVER1Q8IY67 606 aaKnown RBP11.18□□□□□ -0.62
NR1H3-230ENST00000527949 PHACTR4Q8IZ21 702 aa11.18□□□□□ -0.62
NR1H3-230ENST00000527949 CBARPQ8N350 705 aaPredicted RBP11.18□□□□□ -0.62
NR1H3-230ENST00000527949 ATPAF2Q8N5M1 289 aa11.18□□□□□ -0.62
NR1H3-230ENST00000527949 TPCN2Q8NHX9 752 aa11.18□□□□□ -0.62
NR1H3-230ENST00000527949 NSMCE1Q8WV22 266 aa11.18□□□□□ -0.62
NR1H3-230ENST00000527949 MAML1Q92585 1016 aa11.18□□□□□ -0.62
NR1H3-230ENST00000527949 HSPH1Q92598 858 aa11.18□□□□□ -0.62
NR1H3-230ENST00000527949 APOLD1Q96LR9 279 aa11.18□□□□□ -0.62
NR1H3-230ENST00000527949 BOCQ9BWV1 1114 aa11.18□□□□□ -0.62
NR1H3-230ENST00000527949 ABCG4Q9H172 646 aa11.18□□□□□ -0.62
NR1H3-230ENST00000527949 TSPY26PQ9H489 355 aa11.18□□□□□ -0.62
NR1H3-230ENST00000527949 MBNL1Q9NR56 388 aaKnown RBP11.18□□□□□ -0.62
NR1H3-230ENST00000527949 HAUS2Q9NVX0 235 aa11.18□□□□□ -0.62
NR1H3-230ENST00000527949 KLF15Q9UIH9 416 aa11.18□□□□□ -0.62
NR1H3-230ENST00000527949 INTUQ9ULD6 942 aa11.18□□□□□ -0.62
NR1H3-230ENST00000527949 PPIL1Q9Y3C6 166 aa11.18□□□□□ -0.62
NR1H3-230ENST00000527949 U3KQA8 63 aa11.18□□□□□ -0.62
NR1H3-230ENST00000527949 RP1P56715 2156 aa11.18□□□□□ -0.62
NR1H3-230ENST00000527949 SHROOM3Q8TF72 1996 aa11.17□□□□□ -0.62
NR1H3-230ENST00000527949 LRP4O75096 1905 aa11.17□□□□□ -0.62
NR1H3-230ENST00000527949 EME2A4GXA9 379 aaPredicted RBP11.17□□□□□ -0.62
NR1H3-230ENST00000527949 PSMD11O00231 422 aa11.17□□□□□ -0.62
NR1H3-230ENST00000527949 KLK10O43240 276 aa11.17□□□□□ -0.62
NR1H3-230ENST00000527949 OPA1O60313 960 aa11.17□□□□□ -0.62
NR1H3-230ENST00000527949 USP12O75317 370 aa11.17□□□□□ -0.62
NR1H3-230ENST00000527949 HTR1BP28222 390 aa11.17□□□□□ -0.62
NR1H3-230ENST00000527949 RBMS1P29558 406 aaKnown RBP11.17□□□□□ -0.62
NR1H3-230ENST00000527949 ARHGAP25P42331 645 aa11.17□□□□□ -0.62
NR1H3-230ENST00000527949 RPIAP49247 311 aa11.17□□□□□ -0.62
NR1H3-230ENST00000527949 LIG3P49916 1009 aa11.17□□□□□ -0.62
NR1H3-230ENST00000527949 CSRP3P50461 194 aa11.17□□□□□ -0.62
NR1H3-230ENST00000527949 SCNN1BP51168 640 aa11.17□□□□□ -0.62
NR1H3-230ENST00000527949 PPARDQ03181 441 aa11.17□□□□□ -0.62
NR1H3-230ENST00000527949 GALNT2Q10471 571 aa11.17□□□□□ -0.62
NR1H3-230ENST00000527949 DPYSL3Q14195 570 aa11.17□□□□□ -0.62
NR1H3-230ENST00000527949 KRT81Q14533 505 aa11.17□□□□□ -0.62
NR1H3-230ENST00000527949 NFATC4Q14934 902 aa11.17□□□□□ -0.62
NR1H3-230ENST00000527949 TSR1Q2NL82 804 aaKnown RBP11.17□□□□□ -0.62
NR1H3-230ENST00000527949 MARC1Q5VT66 337 aa11.17□□□□□ -0.62
NR1H3-230ENST00000527949 TIGD7Q6NT04 549 aaPredicted RBP11.17□□□□□ -0.62
NR1H3-230ENST00000527949 RHOT2Q8IXI1 618 aa11.17□□□□□ -0.62
NR1H3-230ENST00000527949 NETO2Q8NC67 525 aa11.17□□□□□ -0.62
NR1H3-230ENST00000527949 WDR48Q8TAF3 677 aa11.17□□□□□ -0.62
NR1H3-230ENST00000527949 TTC9Q92623 222 aa11.17□□□□□ -0.62
NR1H3-230ENST00000527949 GLMNQ92990 594 aa11.17□□□□□ -0.62
NR1H3-230ENST00000527949 NAT6Q93015 286 aa11.17□□□□□ -0.62
NR1H3-230ENST00000527949 MCCC1Q96RQ3 725 aaPredicted RBP11.17□□□□□ -0.62
NR1H3-230ENST00000527949 WRAP53Q9BUR4 548 aaKnown RBP11.17□□□□□ -0.62
NR1H3-230ENST00000527949 APOOQ9BUR5 198 aa11.17□□□□□ -0.62
NR1H3-230ENST00000527949 SLC13A1Q9BZW2 595 aa11.17□□□□□ -0.62
NR1H3-230ENST00000527949 CTTNBP2NLQ9P2B4 639 aa11.17□□□□□ -0.62
NR1H3-230ENST00000527949 APOBEC3BQ9UH17 382 aaKnown RBP11.17□□□□□ -0.62
NR1H3-230ENST00000527949 PHTF1Q9UMS5 762 aa11.17□□□□□ -0.62
NR1H3-230ENST00000527949 DGKBQ9Y6T7 804 aa11.17□□□□□ -0.62
NR1H3-230ENST00000527949 TENM4Q6N022 2769 aa11.16□□□□□ -0.62
NR1H3-230ENST00000527949 FFAR2O15552 330 aa11.16□□□□□ -0.62
NR1H3-230ENST00000527949 SLC28A2O43868 658 aa11.16□□□□□ -0.62
NR1H3-230ENST00000527949 MFAP3LO75121 409 aa11.16□□□□□ -0.62
NR1H3-230ENST00000527949 RECQL5O94762 991 aaPredicted RBP11.16□□□□□ -0.62
NR1H3-230ENST00000527949 RASGRP1O95267 797 aa11.16□□□□□ -0.62
NR1H3-230ENST00000527949 MPOP05164 745 aa11.16□□□□□ -0.62
NR1H3-230ENST00000527949 ALPIP09923 528 aa11.16□□□□□ -0.62
NR1H3-230ENST00000527949 ELFN1P0C7U0 828 aa11.16□□□□□ -0.62
NR1H3-230ENST00000527949 KRT10P13645 584 aa11.16□□□□□ -0.62
NR1H3-230ENST00000527949 ITIH2P19823 946 aa11.16□□□□□ -0.62
NR1H3-230ENST00000527949 MX2P20592 715 aa11.16□□□□□ -0.62
NR1H3-230ENST00000527949 KELP23276 732 aa11.16□□□□□ -0.62
NR1H3-230ENST00000527949 CCNCP24863 283 aa11.16□□□□□ -0.62
NR1H3-230ENST00000527949 GARSP41250 739 aaKnown RBP11.16□□□□□ -0.62
NR1H3-230ENST00000527949 MMP13P45452 471 aa11.16□□□□□ -0.62
NR1H3-230ENST00000527949 HK3P52790 923 aa11.16□□□□□ -0.62
NR1H3-230ENST00000527949 ELOCQ15369 112 aa11.16□□□□□ -0.62
NR1H3-230ENST00000527949 IFI16Q16666 785 aaKnown RBP11.16□□□□□ -0.62
NR1H3-230ENST00000527949 LRRC73Q5JTD7 316 aa11.16□□□□□ -0.62
NR1H3-230ENST00000527949 C6orf132Q5T0Z8 1188 aa11.16□□□□□ -0.62
NR1H3-230ENST00000527949 LRRC38Q5VT99 294 aa11.16□□□□□ -0.62
NR1H3-230ENST00000527949 ESRP1Q6NXG1 681 aaKnown RBP11.16□□□□□ -0.62
NR1H3-230ENST00000527949 SARM1Q6SZW1 724 aa11.16□□□□□ -0.62
NR1H3-230ENST00000527949 NLRP8Q86W28 1048 aa11.16□□□□□ -0.62
NR1H3-230ENST00000527949 CNGA4Q8IV77 575 aa11.16□□□□□ -0.62
NR1H3-230ENST00000527949 TP53INP2Q8IXH6 220 aa11.16□□□□□ -0.62
NR1H3-230ENST00000527949 PGBD5Q8N414 524 aa11.16□□□□□ -0.62
NR1H3-230ENST00000527949 PCDH19Q8TAB3 1148 aa11.16□□□□□ -0.62
NR1H3-230ENST00000527949 SCRN2Q96FV2 425 aa11.16□□□□□ -0.62
NR1H3-230ENST00000527949 NAF1Q96HR8 494 aaKnown RBP11.16□□□□□ -0.62
NR1H3-230ENST00000527949 BTBD6Q96KE9 485 aa11.16□□□□□ -0.62
NR1H3-230ENST00000527949 COQ10AQ96MF6 247 aa11.16□□□□□ -0.62
NR1H3-230ENST00000527949 NSMCE3Q96MG7 304 aa11.16□□□□□ -0.62
NR1H3-230ENST00000527949 WDR92Q96MX6 357 aa11.16□□□□□ -0.62
NR1H3-230ENST00000527949 IL12RB2Q99665 862 aa11.16□□□□□ -0.62
NR1H3-230ENST00000527949 LRRC61Q9BV99 259 aa11.16□□□□□ -0.62
NR1H3-230ENST00000527949 DEF6Q9H4E7 631 aa11.16□□□□□ -0.62
NR1H3-230ENST00000527949 CPNE5Q9HCH3 593 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms