RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 MAP7D3Q8IWC1 876 aa13.45□□□□□ -0.26
CAPN1-207ENST00000527189 ATPAF2Q8N5M1 289 aa13.45□□□□□ -0.26
CAPN1-207ENST00000527189 TEX26Q8N6G2 289 aa13.45□□□□□ -0.26
CAPN1-207ENST00000527189 OR6C4Q8NGE1 309 aa13.45□□□□□ -0.26
CAPN1-207ENST00000527189 ZNF564Q8TBZ8 553 aaPredicted RBP13.45□□□□□ -0.26
CAPN1-207ENST00000527189 FATE1Q969F0 183 aa13.45□□□□□ -0.26
CAPN1-207ENST00000527189 BTBD6Q96KE9 485 aa13.45□□□□□ -0.26
CAPN1-207ENST00000527189 ZNF578Q96N58 590 aaPredicted RBP13.45□□□□□ -0.26
CAPN1-207ENST00000527189 HAUS2Q9NVX0 235 aa13.45□□□□□ -0.26
CAPN1-207ENST00000527189 KLQ9UEF7 1012 aa13.45□□□□□ -0.26
CAPN1-207ENST00000527189 AMACRQ9UHK6 382 aa13.45□□□□□ -0.26
CAPN1-207ENST00000527189 PHTF1Q9UMS5 762 aa13.45□□□□□ -0.26
CAPN1-207ENST00000527189 NENFQ9UMX5 172 aa13.45□□□□□ -0.26
CAPN1-207ENST00000527189 DOLKQ9UPQ8 538 aa13.45□□□□□ -0.26
CAPN1-207ENST00000527189 OR1A2Q9Y585 309 aa13.45□□□□□ -0.26
CAPN1-207ENST00000527189 SHROOM3Q8TF72 1996 aa13.44□□□□□ -0.26
CAPN1-207ENST00000527189 PSMD11O00231 422 aa13.44□□□□□ -0.26
CAPN1-207ENST00000527189 CBFA2T2O43439 604 aa13.44□□□□□ -0.26
CAPN1-207ENST00000527189 BRINP1O60477 761 aa13.44□□□□□ -0.26
CAPN1-207ENST00000527189 CSO75390 466 aaKnown RBP13.44□□□□□ -0.26
CAPN1-207ENST00000527189 PRKCGP05129 697 aa13.44□□□□□ -0.26
CAPN1-207ENST00000527189 PCCBP05166 539 aa13.44□□□□□ -0.26
CAPN1-207ENST00000527189 CYP2A6P11509 494 aaPredicted RBP13.44□□□□□ -0.26
CAPN1-207ENST00000527189 TGM2P21980 687 aa13.44□□□□□ -0.26
CAPN1-207ENST00000527189 MMP13P45452 471 aa13.44□□□□□ -0.26
CAPN1-207ENST00000527189 ABCG1P45844 678 aa13.44□□□□□ -0.26
CAPN1-207ENST00000527189 ARSEP51690 589 aa13.44□□□□□ -0.26
CAPN1-207ENST00000527189 PAFAH1B3Q15102 231 aaKnown RBP13.44□□□□□ -0.26
CAPN1-207ENST00000527189 SLC18A3Q16572 532 aa13.44□□□□□ -0.26
CAPN1-207ENST00000527189 ISXQ2M1V0 245 aa13.44□□□□□ -0.26
CAPN1-207ENST00000527189 TBC1D25Q3MII6 688 aa13.44□□□□□ -0.26
CAPN1-207ENST00000527189 SPECC1LQ69YQ0 1117 aa13.44□□□□□ -0.26
CAPN1-207ENST00000527189 PNCKQ6P2M8 343 aa13.44□□□□□ -0.26
CAPN1-207ENST00000527189 GUSBP11Q6P575 273 aa13.44□□□□□ -0.26
CAPN1-207ENST00000527189 IGF2-ASQ6U949 168 aa13.44□□□□□ -0.26
CAPN1-207ENST00000527189 SLC35F3Q8IY50 421 aa13.44□□□□□ -0.26
CAPN1-207ENST00000527189 NDUFAF2Q8N183 169 aa13.44□□□□□ -0.26
CAPN1-207ENST00000527189 CBARPQ8N350 705 aaPredicted RBP13.44□□□□□ -0.26
CAPN1-207ENST00000527189 PGBD5Q8N414 524 aa13.44□□□□□ -0.26
CAPN1-207ENST00000527189 ARL10Q8N8L6 244 aa13.44□□□□□ -0.26
CAPN1-207ENST00000527189 OR8K1Q8NGG5 319 aa13.44□□□□□ -0.26
CAPN1-207ENST00000527189 OR56A4Q8NGH8 313 aa13.44□□□□□ -0.26
CAPN1-207ENST00000527189 CTNNBL1Q8WYA6 563 aaPredicted RBP13.44□□□□□ -0.26
CAPN1-207ENST00000527189 TSACCQ96A04 125 aaPredicted RBP13.44□□□□□ -0.26
CAPN1-207ENST00000527189 SCRN2Q96FV2 425 aa13.44□□□□□ -0.26
CAPN1-207ENST00000527189 NSMCE3Q96MG7 304 aa13.44□□□□□ -0.26
CAPN1-207ENST00000527189 RBM15Q96T37 977 aaKnown RBP eCLIP13.44□□□□□ -0.26
CAPN1-207ENST00000527189 ZNF670Q9BS34 389 aa13.44□□□□□ -0.26
CAPN1-207ENST00000527189 XPO4Q9C0E2 1151 aaKnown RBP13.44□□□□□ -0.26
CAPN1-207ENST00000527189 POLR1BQ9H9Y6 1135 aa13.44□□□□□ -0.26
CAPN1-207ENST00000527189 NOD2Q9HC29 1040 aa13.44□□□□□ -0.26
CAPN1-207ENST00000527189 PADI4Q9UM07 663 aa13.44□□□□□ -0.26
CAPN1-207ENST00000527189 PPIL1Q9Y3C6 166 aa13.44□□□□□ -0.26
CAPN1-207ENST00000527189 PCDHGC4Q9Y5F7 938 aa13.44□□□□□ -0.26
CAPN1-207ENST00000527189 SSU72P8A0A1W2PR75 194 aa13.43□□□□□ -0.26
CAPN1-207ENST00000527189 TLX3O43711 291 aaPredicted RBP13.43□□□□□ -0.26
CAPN1-207ENST00000527189 USP12O75317 370 aa13.43□□□□□ -0.26
CAPN1-207ENST00000527189 PROSCO94903 275 aa13.43□□□□□ -0.26
CAPN1-207ENST00000527189 KRT7P08729 469 aa13.43□□□□□ -0.26
CAPN1-207ENST00000527189 KRT10P13645 584 aa13.43□□□□□ -0.26
CAPN1-207ENST00000527189 GM2AP17900 193 aa13.43□□□□□ -0.26
CAPN1-207ENST00000527189 VIPR1P32241 457 aa13.43□□□□□ -0.26
CAPN1-207ENST00000527189 SSR1P43307 286 aaKnown RBP13.43□□□□□ -0.26
CAPN1-207ENST00000527189 ERVPABLB-1P60509 514 aa13.43□□□□□ -0.26
CAPN1-207ENST00000527189 ACOX1Q15067 660 aa13.43□□□□□ -0.26
CAPN1-207ENST00000527189 TSR1Q2NL82 804 aaKnown RBP13.43□□□□□ -0.26
CAPN1-207ENST00000527189 ASTE1Q2TB18 679 aaPredicted RBP13.43□□□□□ -0.26
CAPN1-207ENST00000527189 LRRK1Q38SD2 2015 aa13.43□□□□□ -0.26
CAPN1-207ENST00000527189 TIGD7Q6NT04 549 aaPredicted RBP13.43□□□□□ -0.26
CAPN1-207ENST00000527189 RBM44Q6ZP01 1051 aaKnown RBP13.43□□□□□ -0.26
CAPN1-207ENST00000527189 KCTD6Q8NC69 237 aa13.43□□□□□ -0.26
CAPN1-207ENST00000527189 PLA2G15Q8NCC3 412 aa13.43□□□□□ -0.26
CAPN1-207ENST00000527189 FUBP1Q96AE4 644 aaKnown RBP13.43□□□□□ -0.26
CAPN1-207ENST00000527189 COQ10AQ96MF6 247 aa13.43□□□□□ -0.26
CAPN1-207ENST00000527189 TSGA13Q96PP4 275 aa13.43□□□□□ -0.26
CAPN1-207ENST00000527189 DNAJC7Q99615 494 aa13.43□□□□□ -0.26
CAPN1-207ENST00000527189 ZNHIT6Q9NWK9 470 aaKnown RBP13.43□□□□□ -0.26
CAPN1-207ENST00000527189 CTTNBP2NLQ9P2B4 639 aa13.43□□□□□ -0.26
CAPN1-207ENST00000527189 B4GALT6Q9UBX8 382 aa13.43□□□□□ -0.26
CAPN1-207ENST00000527189 PCDHB1Q9Y5F3 818 aa13.43□□□□□ -0.26
CAPN1-207ENST00000527189 MATN3O15232 486 aa13.42□□□□□ -0.26
CAPN1-207ENST00000527189 HEXIM1O94992 359 aaKnown RBP13.42□□□□□ -0.26
CAPN1-207ENST00000527189 PGLSO95336 258 aa13.42□□□□□ -0.26
CAPN1-207ENST00000527189 CPP00450 1065 aa13.42□□□□□ -0.26
CAPN1-207ENST00000527189 CCNCP24863 283 aa13.42□□□□□ -0.26
CAPN1-207ENST00000527189 TEAD1P28347 426 aa13.42□□□□□ -0.26
CAPN1-207ENST00000527189 MAN1A1P33908 653 aa13.42□□□□□ -0.26
CAPN1-207ENST00000527189 GARSP41250 739 aaKnown RBP13.42□□□□□ -0.26
CAPN1-207ENST00000527189 GALNT2Q10471 571 aa13.42□□□□□ -0.26
CAPN1-207ENST00000527189 DPYSL3Q14195 570 aa13.42□□□□□ -0.26
CAPN1-207ENST00000527189 IFI16Q16666 785 aaKnown RBP13.42□□□□□ -0.26
CAPN1-207ENST00000527189 ANKRD20A8PQ5CZ79 823 aa13.42□□□□□ -0.26
CAPN1-207ENST00000527189 PERM1Q5SV97 790 aa13.42□□□□□ -0.26
CAPN1-207ENST00000527189 ARMC12Q5T9G4 340 aa13.42□□□□□ -0.26
CAPN1-207ENST00000527189 ALG1LQ6GMV1 187 aa13.42□□□□□ -0.26
CAPN1-207ENST00000527189 OGFOD3Q6PK18 319 aa13.42□□□□□ -0.26
CAPN1-207ENST00000527189 USP45Q70EL2 814 aa13.42□□□□□ -0.26
CAPN1-207ENST00000527189 RD3Q7Z3Z2 195 aa13.42□□□□□ -0.26
CAPN1-207ENST00000527189 RAVER1Q8IY67 606 aaKnown RBP13.42□□□□□ -0.26
CAPN1-207ENST00000527189 PDCD6IPQ8WUM4 868 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms