RNA–Protein interactions for RNA: ENST00000527133.2

CLNS1A-207, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-207ENST00000527133 CYTH1Q15438 398 aa13.05□□□□□ -0.32
CLNS1A-207ENST00000527133 CLPPQ16740 277 aaPredicted RBP13.05□□□□□ -0.32
CLNS1A-207ENST00000527133 CCDC14Q49A88 953 aa13.05□□□□□ -0.32
CLNS1A-207ENST00000527133 NKAIN2Q5VXU1 208 aa13.05□□□□□ -0.32
CLNS1A-207ENST00000527133 NAA35Q5VZE5 725 aa13.05□□□□□ -0.32
CLNS1A-207ENST00000527133 SMYD5Q6GMV2 418 aa13.05□□□□□ -0.32
CLNS1A-207ENST00000527133 BRAT1Q6PJG6 821 aa13.05□□□□□ -0.32
CLNS1A-207ENST00000527133 ARCQ7LC44 396 aa13.05□□□□□ -0.32
CLNS1A-207ENST00000527133 DNAAF5Q86Y56 855 aa13.05□□□□□ -0.32
CLNS1A-207ENST00000527133 ELOA2Q8IYF1 753 aaPredicted RBP13.05□□□□□ -0.32
CLNS1A-207ENST00000527133 AGBL5Q8NDL9 886 aa13.05□□□□□ -0.32
CLNS1A-207ENST00000527133 GPT2Q8TD30 523 aa13.05□□□□□ -0.32
CLNS1A-207ENST00000527133 RXFP2Q8WXD0 754 aa13.05□□□□□ -0.32
CLNS1A-207ENST00000527133 DDA1Q9BW61 102 aa13.05□□□□□ -0.32
CLNS1A-207ENST00000527133 WDR26Q9H7D7 661 aa13.05□□□□□ -0.32
CLNS1A-207ENST00000527133 CARS2Q9HA77 564 aaKnown RBP13.05□□□□□ -0.32
CLNS1A-207ENST00000527133 LRRC4CQ9HCJ2 640 aa13.05□□□□□ -0.32
CLNS1A-207ENST00000527133 SLC39A1Q9NY26 324 aa13.05□□□□□ -0.32
CLNS1A-207ENST00000527133 RASA4BC9J798 803 aa13.04□□□□□ -0.32
CLNS1A-207ENST00000527133 TEX33O43247 280 aa13.04□□□□□ -0.32
CLNS1A-207ENST00000527133 RASA4O43374 803 aa13.04□□□□□ -0.32
CLNS1A-207ENST00000527133 BUB1BO60566 1050 aaPredicted RBP13.04□□□□□ -0.32
CLNS1A-207ENST00000527133 ECEL1O95672 775 aa13.04□□□□□ -0.32
CLNS1A-207ENST00000527133 FGF1P05230 155 aa13.04□□□□□ -0.32
CLNS1A-207ENST00000527133 HOXC4P09017 264 aaPredicted RBP13.04□□□□□ -0.32
CLNS1A-207ENST00000527133 ELFN1P0C7U0 828 aa13.04□□□□□ -0.32
CLNS1A-207ENST00000527133 CCNB1P14635 433 aa13.04□□□□□ -0.32
CLNS1A-207ENST00000527133 EPHB2P29323 1055 aa13.04□□□□□ -0.32
CLNS1A-207ENST00000527133 MTIF2P46199 727 aaKnown RBP13.04□□□□□ -0.32
CLNS1A-207ENST00000527133 LIMK2P53671 638 aa13.04□□□□□ -0.32
CLNS1A-207ENST00000527133 NOMO3P69849 1222 aa13.04□□□□□ -0.32
CLNS1A-207ENST00000527133 RALGDSQ12967 914 aa13.04□□□□□ -0.32
CLNS1A-207ENST00000527133 TRA2AQ13595 282 aaKnown RBP eCLIP13.04□□□□□ -0.324e-8■□□□□ 9.8
CLNS1A-207ENST00000527133 GRM3Q14832 879 aa13.04□□□□□ -0.32
CLNS1A-207ENST00000527133 NR1D2Q14995 579 aa13.04□□□□□ -0.32
CLNS1A-207ENST00000527133 TSR1Q2NL82 804 aaKnown RBP13.04□□□□□ -0.32
CLNS1A-207ENST00000527133 C17orf82Q86X59 251 aaPredicted RBP13.04□□□□□ -0.32
CLNS1A-207ENST00000527133 FAM129CQ86XR2 697 aa13.04□□□□□ -0.32
CLNS1A-207ENST00000527133 NRROSQ86YC3 692 aa13.04□□□□□ -0.32
CLNS1A-207ENST00000527133 CAMK1DQ8IU85 385 aa13.04□□□□□ -0.32
CLNS1A-207ENST00000527133 NRSN1Q8IZ57 195 aa13.04□□□□□ -0.32
CLNS1A-207ENST00000527133 PYROXD2Q8N2H3 581 aa13.04□□□□□ -0.32
CLNS1A-207ENST00000527133 RTL3Q8N8U3 475 aaKnown RBP13.04□□□□□ -0.32
CLNS1A-207ENST00000527133 OR4D9Q8NGE8 314 aa13.04□□□□□ -0.32
CLNS1A-207ENST00000527133 PATE1Q8WXA2 126 aa13.04□□□□□ -0.32
CLNS1A-207ENST00000527133 ABHD17AQ96GS6 310 aa13.04□□□□□ -0.32
CLNS1A-207ENST00000527133 SLC45A3Q96JT2 553 aa13.04□□□□□ -0.32
CLNS1A-207ENST00000527133 ZNF641Q96N77 438 aaPredicted RBP13.04□□□□□ -0.32
CLNS1A-207ENST00000527133 ASPSCR1Q9BZE9 553 aa13.04□□□□□ -0.32
CLNS1A-207ENST00000527133 GPN2Q9H9Y4 310 aaPredicted RBP13.04□□□□□ -0.32
CLNS1A-207ENST00000527133 OCIAD1Q9NX40 245 aa13.04□□□□□ -0.32
CLNS1A-207ENST00000527133 TAAR2Q9P1P5 351 aa13.04□□□□□ -0.32
CLNS1A-207ENST00000527133 UBA2Q9UBT2 640 aaPredicted RBP13.04□□□□□ -0.32
CLNS1A-207ENST00000527133 ICE1Q9Y2F5 2266 aa13.04□□□□□ -0.32
CLNS1A-207ENST00000527133 CFAP69A5D8W1 941 aa13.03□□□□□ -0.32
CLNS1A-207ENST00000527133 EFCAB7A8K855 629 aa13.03□□□□□ -0.32
CLNS1A-207ENST00000527133 A8MX80 341 aa13.03□□□□□ -0.32
CLNS1A-207ENST00000527133 CAPN5O15484 640 aaPredicted RBP13.03□□□□□ -0.32
CLNS1A-207ENST00000527133 MTSS1O43312 755 aa13.03□□□□□ -0.32
CLNS1A-207ENST00000527133 MMEP08473 750 aa13.03□□□□□ -0.32
CLNS1A-207ENST00000527133 THRAP10827 490 aa13.03□□□□□ -0.32
CLNS1A-207ENST00000527133 AK4P27144 223 aaPredicted RBP13.03□□□□□ -0.32
CLNS1A-207ENST00000527133 CSF2RBP32927 897 aa13.03□□□□□ -0.32
CLNS1A-207ENST00000527133 TRIM23P36406 574 aa13.03□□□□□ -0.32
CLNS1A-207ENST00000527133 STAT1P42224 750 aa13.03□□□□□ -0.32
CLNS1A-207ENST00000527133 GPR3P46089 330 aa13.03□□□□□ -0.32
CLNS1A-207ENST00000527133 HDAC4P56524 1084 aa13.03□□□□□ -0.32
CLNS1A-207ENST00000527133 CDC20Q12834 499 aa13.03□□□□□ -0.32
CLNS1A-207ENST00000527133 ILF3Q12906 894 aaKnown RBP eCLIP13.03□□□□□ -0.32
CLNS1A-207ENST00000527133 DEFB109BQ30KR1 87 aa13.03□□□□□ -0.32
CLNS1A-207ENST00000527133 PARP15Q460N3 678 aa13.03□□□□□ -0.32
CLNS1A-207ENST00000527133 LACTB2Q53H82 288 aaPredicted RBP13.03□□□□□ -0.32
CLNS1A-207ENST00000527133 DCAF12Q5T6F0 453 aa13.03□□□□□ -0.32
CLNS1A-207ENST00000527133 ANKS6Q68DC2 871 aa13.03□□□□□ -0.32
CLNS1A-207ENST00000527133 SLC30A9Q6PML9 568 aa13.03□□□□□ -0.32
CLNS1A-207ENST00000527133 LIPIQ6XZB0 460 aa13.03□□□□□ -0.32
CLNS1A-207ENST00000527133 STRADAQ7RTN6 431 aa13.03□□□□□ -0.32
CLNS1A-207ENST00000527133 NOP9Q86U38 636 aaKnown RBP13.03□□□□□ -0.32
CLNS1A-207ENST00000527133 UNC5BQ8IZJ1 945 aa13.03□□□□□ -0.32
CLNS1A-207ENST00000527133 PELI3Q8N2H9 469 aa13.03□□□□□ -0.32
CLNS1A-207ENST00000527133 PAF1Q8N7H5 531 aa13.03□□□□□ -0.32
CLNS1A-207ENST00000527133 JOSD2Q8TAC2 188 aa13.03□□□□□ -0.32
CLNS1A-207ENST00000527133 FAM172AQ8WUF8 416 aa13.03□□□□□ -0.32
CLNS1A-207ENST00000527133 APOBEC4Q8WW27 367 aaKnown RBP13.03□□□□□ -0.32
CLNS1A-207ENST00000527133 KIAA1143Q96AT1 154 aaPredicted RBP13.03□□□□□ -0.32
CLNS1A-207ENST00000527133 MIB2Q96AX9 1013 aa13.03□□□□□ -0.32
CLNS1A-207ENST00000527133 GSDMCQ9BYG8 508 aa13.03□□□□□ -0.32
CLNS1A-207ENST00000527133 ZMYND15Q9H091 742 aa13.03□□□□□ -0.32
CLNS1A-207ENST00000527133 TMEM9Q9P0T7 183 aa13.03□□□□□ -0.32
CLNS1A-207ENST00000527133 RWDD2AQ9UIY3 292 aa13.03□□□□□ -0.32
CLNS1A-207ENST00000527133 PILRAQ9UKJ1 303 aa13.03□□□□□ -0.32
CLNS1A-207ENST00000527133 PRR19A6NJB7 356 aa13.02□□□□□ -0.33
CLNS1A-207ENST00000527133 C2CD4BA6NLJ0 364 aa13.02□□□□□ -0.33
CLNS1A-207ENST00000527133 PDE2AO00408 941 aaPredicted RBP13.02□□□□□ -0.33
CLNS1A-207ENST00000527133 GM2AP17900 193 aa13.02□□□□□ -0.33
CLNS1A-207ENST00000527133 SERPINA4P29622 427 aa13.02□□□□□ -0.33
CLNS1A-207ENST00000527133 OAS2P29728 719 aaKnown RBP13.02□□□□□ -0.33
CLNS1A-207ENST00000527133 PTPN9P43378 593 aa13.02□□□□□ -0.33
CLNS1A-207ENST00000527133 GNPDA1P46926 289 aa13.02□□□□□ -0.33
CLNS1A-207ENST00000527133 YBEYP58557 167 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms