RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 ADPGKQ9BRR6 497 aa4.75□□□□□ -1.65
USP48-211ENST00000526044 FAM83DQ9H4H8 585 aa4.75□□□□□ -1.65
USP48-211ENST00000526044 ERVK-5Q9HDB9 667 aa4.75□□□□□ -1.65
USP48-211ENST00000526044 PNPLA8Q9NP80 782 aa4.75□□□□□ -1.65
USP48-211ENST00000526044 AGPAT5Q9NUQ2 364 aa4.75□□□□□ -1.65
USP48-211ENST00000526044 MID2Q9UJV3 735 aa4.75□□□□□ -1.65
USP48-211ENST00000526044 ADAM21Q9UKJ8 722 aa4.75□□□□□ -1.65
USP48-211ENST00000526044 AGO2Q9UKV8 859 aaKnown RBP4.75□□□□□ -1.65
USP48-211ENST00000526044 TBX21Q9UL17 535 aa4.75□□□□□ -1.65
USP48-211ENST00000526044 USP22Q9UPT9 525 aa4.75□□□□□ -1.65
USP48-211ENST00000526044 TRAF3IP3Q9Y228 551 aa4.75□□□□□ -1.65
USP48-211ENST00000526044 FAM50BQ9Y247 325 aa4.75□□□□□ -1.65
USP48-211ENST00000526044 FRMD4BQ9Y2L6 1034 aa4.75□□□□□ -1.65
USP48-211ENST00000526044 FNDC1Q4ZHG4 1894 aaPredicted RBP4.75□□□□□ -1.65
USP48-211ENST00000526044 SCN5AQ14524 2016 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 CENPFP49454 3210 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 TRIM49BA6NDI0 452 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 ZNF233A6NK53 670 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 AQP7P3A6NL99 342 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 F8W8V4 182 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 IKBKBO14920 756 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 HNRNPDLO14979 420 aaKnown RBP4.74□□□□□ -1.65
USP48-211ENST00000526044 OGTO15294 1046 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 B4GALT5O43286 388 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 TIMM44O43615 452 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 EXTL3O43909 919 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 EXOC3O60645 756 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 SRGAP2O75044 1071 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 PIAS2O75928 621 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 JTBO76095 146 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 TJP3O95049 919 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 IL18RAPO95256 599 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 GNA14O95837 355 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 PIGRP01833 764 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 CXCL10P02778 98 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 EDN1P05305 212 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 NPSP0C0P6 89 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 MCF2P10911 925 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 HARSP12081 509 aaKnown RBP4.74□□□□□ -1.65
USP48-211ENST00000526044 TPH1P17752 444 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 NR2F2P24468 414 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 IL1R2P27930 398 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 EPHA3P29320 983 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 ADSSP30520 456 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 PSMC2P35998 433 aaKnown RBP4.74□□□□□ -1.65
USP48-211ENST00000526044 PIK3CBP42338 1070 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 CARSP49589 748 aaKnown RBP4.74□□□□□ -1.65
USP48-211ENST00000526044 CYP2J2P51589 502 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 NEK3P51956 506 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 MYL5Q02045 173 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 GPNMBQ14956 572 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 NFIL3Q16649 462 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 KYAT1Q16773 422 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 ZNF750Q32MQ0 723 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 FCRL6Q6DN72 434 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 TWF2Q6IBS0 349 aaKnown RBP4.74□□□□□ -1.65
USP48-211ENST00000526044 TTI2Q6NXR4 508 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 SLC39A4Q6P5W5 647 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 SLC27A1Q6PCB7 646 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 SYCE2Q6PIF2 218 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 C11orf57Q6ZUT1 292 aaPredicted RBP4.74□□□□□ -1.65
USP48-211ENST00000526044 Q6ZWC4 215 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 SLC24A5Q71RS6 500 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 RNF44Q7L0R7 432 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 DEFB128Q7Z7B8 93 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 CDR2LQ86X02 465 aaPredicted RBP4.74□□□□□ -1.65
USP48-211ENST00000526044 FAM114A1Q8IWE2 563 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 C12orf56Q8IXR9 622 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 THNSL1Q8IYQ7 743 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 HACE1Q8IYU2 909 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 GPD1LQ8N335 351 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 XXYLT1Q8NBI6 393 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 DBF4BQ8NFT6 615 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 ABHD11Q8NFV4 315 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 NOC3LQ8WTT2 800 aaKnown RBP4.74□□□□□ -1.65
USP48-211ENST00000526044 TMEM174Q8WUU8 243 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 APBB2Q92870 758 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 BADQ92934 168 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 CCDC51Q96ER9 411 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 EEF2KMTQ96G04 330 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 LBHD1Q9BQE6 289 aaPredicted RBP4.74□□□□□ -1.65
USP48-211ENST00000526044 CBWD1Q9BRT8 395 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 FAM213AQ9BRX8 229 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 MSTO1Q9BUK6 570 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 FSD1LQ9BXM9 530 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 FTHL17Q9BXU8 183 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 IFIH1Q9BYX4 1025 aaKnown RBP4.74□□□□□ -1.65
USP48-211ENST00000526044 TRIM6Q9C030 488 aaPredicted RBP4.74□□□□□ -1.65
USP48-211ENST00000526044 AGPAT3Q9NRZ7 376 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 RGS18Q9NS28 235 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 DMAC2Q9NW81 257 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 DKK4Q9UBT3 224 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 ZNF212Q9UDV6 495 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 CORO2BQ9UQ03 480 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 PIN4Q9Y237 131 aaKnown RBP4.74□□□□□ -1.65
USP48-211ENST00000526044 PCDHB2Q9Y5E7 798 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 STYXL1Q9Y6J8 313 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 SIP14410 1827 aa4.74□□□□□ -1.65
USP48-211ENST00000526044 UMODL1Q5DID0 1318 aa4.73□□□□□ -1.65
USP48-211ENST00000526044 CNTNAP2Q9UHC6 1331 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms