RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 TIGD4Q8IY51 512 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 SCYL3Q8IZE3 742 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 BATF2Q8N1L9 274 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 GUF1Q8N442 669 aaKnown RBP4.53□□□□□ -1.68
CD44-213ENST00000525209 TOP6BLQ8N6T0 577 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 SIRT6Q8N6T7 355 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 ENDOVQ8N8Q3 282 aaKnown RBP4.53□□□□□ -1.68
CD44-213ENST00000525209 STEAP2Q8NFT2 490 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 FBXO18Q8NFZ0 1043 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 TSPAN14Q8NG11 270 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 OR5AN1Q8NGI8 311 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 OCC1Q8TAD7 63 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.53□□□□□ -1.68
CD44-213ENST00000525209 MIB2Q96AX9 1013 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 HES6Q96HZ4 224 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 ARL5BQ96KC2 179 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 CATSPER2Q96P56 530 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 OR2A14Q96R47 310 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 CCT7Q99832 543 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 SSX3Q99909 188 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 WDR83Q9BRX9 315 aaKnown RBP4.53□□□□□ -1.68
CD44-213ENST00000525209 C17orf80Q9BSJ5 609 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 CTDSP1Q9GZU7 261 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 LSG1Q9H089 658 aaKnown RBP4.53□□□□□ -1.68
CD44-213ENST00000525209 SERHL2Q9H4I8 314 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 C8orf33Q9H7E9 229 aaPredicted RBP4.53□□□□□ -1.68
CD44-213ENST00000525209 AKTIPQ9H8T0 292 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 FAM118AQ9NWS6 357 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 GPRC5DQ9NZD1 345 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 SPG21Q9NZD8 308 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 LMCD1Q9NZU5 365 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 FBLN5Q9UBX5 448 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 STK39Q9UEW8 545 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 VAV3Q9UKW4 847 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 USP22Q9UPT9 525 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 R3HDM2Q9Y2K5 976 aaKnown RBP4.53□□□□□ -1.68
CD44-213ENST00000525209 COPG1Q9Y678 874 aaKnown RBP4.53□□□□□ -1.68
CD44-213ENST00000525209 CAPN6Q9Y6Q1 641 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 DDX49Q9Y6V7 483 aaKnown RBP4.53□□□□□ -1.68
CD44-213ENST00000525209 COMMD3-BMI1R4GMX3 469 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 CARMIL2Q6F5E8 1435 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 KIF21BO75037 1637 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 ABCA10Q8WWZ4 1543 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 TEX14Q8IWB6 1497 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 A0A087WZY1 265 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 C15orf38-AP3S2A0A0A6YYH1 394 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 A0A1B0GVM2 712 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 C2orf92A0A1B0GVN3 265 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 C5orf51A6NDU8 294 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 AGAP5A6NIR3 686 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 ZNF785A8K8V0 405 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 TMCO5BA8MYB1 307 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 PRR33A8MZF0 331 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 WNT10BO00744 389 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 N4BP3O15049 544 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 TEX33O43247 280 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 CIDEAO60543 219 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 SEC31AO94979 1220 aaKnown RBP4.52□□□□□ -1.69
CD44-213ENST00000525209 CELF2O95319 508 aaKnown RBP4.52□□□□□ -1.69
CD44-213ENST00000525209 WISP1O95388 367 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 SLC16A8O95907 504 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 CHEK2O96017 543 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 LMNAP02545 664 aaKnown RBP4.52□□□□□ -1.69
CD44-213ENST00000525209 C8orf89P0DMQ9 161 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 IL2RBP14784 551 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 PRKACBP22694 351 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 CHMLP26374 656 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 MAP4P27816 1152 aaKnown RBP4.52□□□□□ -1.69
CD44-213ENST00000525209 PTPN6P29350 595 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 ALDH1B1P30837 517 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 PRKAR1BP31321 381 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 HNF1BP35680 557 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 FRKP42685 505 aaPredicted RBP4.52□□□□□ -1.69
CD44-213ENST00000525209 CRKLP46109 303 aaKnown RBP4.52□□□□□ -1.69
CD44-213ENST00000525209 GABRB2P47870 512 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 SCNN1GP51170 649 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 ANTXR2P58335 489 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 EIF3EP60228 445 aaKnown RBP4.52□□□□□ -1.69
CD44-213ENST00000525209 ATP2C1P98194 919 aaPredicted RBP4.52□□□□□ -1.69
CD44-213ENST00000525209 TAP1Q03518 808 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 BNIP1Q12981 228 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 PDZK1IP1Q13113 114 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 ZSCAN23Q3MJ62 389 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 NADK2Q4G0N4 442 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 ZNF667Q5HYK9 610 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 OR6B2Q6IFH4 312 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 MIS18BP1Q6P0N0 1132 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 CORO6Q6QEF8 472 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 CFAP77Q6ZQR2 320 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 FAM214BQ7L5A3 538 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 GPRIN1Q7Z2K8 1008 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 ABI3BPQ7Z7G0 1075 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 EXOC3L1Q86VI1 746 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 ZNF573Q86YE8 665 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 CCDC83Q8IWF9 413 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 REXO1L1PQ8IX06 675 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 CFAP206Q8IYR0 622 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 FAM9CQ8IZT9 166 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 KRT222Q8N1A0 295 aa4.52□□□□□ -1.69
CD44-213ENST00000525209 LILRA3Q8N6C8 439 aaPredicted RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms