RNA–Protein interactions for RNA: ENST00000525207.1

SF3B2-204, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-204ENST00000525207 DNAJC7Q99615 494 aa9.48□□□□□ -0.89
SF3B2-204ENST00000525207 PACSIN1Q9BY11 444 aa9.48□□□□□ -0.89
SF3B2-204ENST00000525207 WDR26Q9H7D7 661 aa9.48□□□□□ -0.89
SF3B2-204ENST00000525207 NOD2Q9HC29 1040 aa9.48□□□□□ -0.89
SF3B2-204ENST00000525207 FGF22Q9HCT0 170 aa9.48□□□□□ -0.89
SF3B2-204ENST00000525207 UVRAGQ9P2Y5 699 aa9.48□□□□□ -0.89
SF3B2-204ENST00000525207 B4GALT6Q9UBX8 382 aa9.48□□□□□ -0.89
SF3B2-204ENST00000525207 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.48□□□□□ -0.896e-19■■□□□ 14.3
SF3B2-204ENST00000525207 DGKBQ9Y6T7 804 aa9.48□□□□□ -0.89
SF3B2-204ENST00000525207 SCN8AQ9UQD0 1980 aa9.48□□□□□ -0.89
SF3B2-204ENST00000525207 A0A1W2PQ67 120 aa9.47□□□□□ -0.89
SF3B2-204ENST00000525207 TTC24A2A3L6 582 aaPredicted RBP9.47□□□□□ -0.89
SF3B2-204ENST00000525207 CPED1A4D0V7 1026 aa9.47□□□□□ -0.89
SF3B2-204ENST00000525207 NPIPB15A6NHN6 443 aaPredicted RBP9.47□□□□□ -0.89
SF3B2-204ENST00000525207 CACNB4O00305 520 aaPredicted RBP9.47□□□□□ -0.89
SF3B2-204ENST00000525207 YY2O15391 372 aa9.47□□□□□ -0.89
SF3B2-204ENST00000525207 TCEA3O75764 348 aa9.47□□□□□ -0.89
SF3B2-204ENST00000525207 DXOO77932 396 aaKnown RBP9.47□□□□□ -0.89
SF3B2-204ENST00000525207 PROSCO94903 275 aa9.47□□□□□ -0.89
SF3B2-204ENST00000525207 HEXIM1O94992 359 aaKnown RBP9.47□□□□□ -0.89
SF3B2-204ENST00000525207 MPOP05164 745 aa9.47□□□□□ -0.89
SF3B2-204ENST00000525207 HOXB3P14651 431 aaPredicted RBP9.47□□□□□ -0.89
SF3B2-204ENST00000525207 IL4RP24394 825 aa9.47□□□□□ -0.89
SF3B2-204ENST00000525207 VIPR1P32241 457 aa9.47□□□□□ -0.89
SF3B2-204ENST00000525207 MAN1A1P33908 653 aa9.47□□□□□ -0.89
SF3B2-204ENST00000525207 GARSP41250 739 aaKnown RBP9.47□□□□□ -0.89
SF3B2-204ENST00000525207 PDX1P52945 283 aa9.47□□□□□ -0.89
SF3B2-204ENST00000525207 SRP54P61011 504 aaKnown RBP9.47□□□□□ -0.89
SF3B2-204ENST00000525207 GABREP78334 506 aa9.47□□□□□ -0.89
SF3B2-204ENST00000525207 GALNT2Q10471 571 aa9.47□□□□□ -0.89
SF3B2-204ENST00000525207 TCEA2Q15560 299 aa9.47□□□□□ -0.89
SF3B2-204ENST00000525207 HADHQ16836 314 aaKnown RBP9.47□□□□□ -0.89
SF3B2-204ENST00000525207 ISXQ2M1V0 245 aa9.47□□□□□ -0.89
SF3B2-204ENST00000525207 ASTE1Q2TB18 679 aaPredicted RBP9.47□□□□□ -0.89
SF3B2-204ENST00000525207 MARC1Q5VT66 337 aa9.47□□□□□ -0.89
SF3B2-204ENST00000525207 SPECC1LQ69YQ0 1117 aa9.47□□□□□ -0.89
SF3B2-204ENST00000525207 LVRNQ6Q4G3 990 aa9.47□□□□□ -0.89
SF3B2-204ENST00000525207 CRTC1Q6UUV9 634 aa9.47□□□□□ -0.89
SF3B2-204ENST00000525207 GKN2Q86XP6 184 aa9.47□□□□□ -0.89
SF3B2-204ENST00000525207 LRRC49Q8IUZ0 686 aa9.47□□□□□ -0.89
SF3B2-204ENST00000525207 PELI3Q8N2H9 469 aa9.47□□□□□ -0.89
SF3B2-204ENST00000525207 SDR16C5Q8N3Y7 309 aa9.47□□□□□ -0.89
SF3B2-204ENST00000525207 OR56A4Q8NGH8 313 aa9.47□□□□□ -0.89
SF3B2-204ENST00000525207 TPCN2Q8NHX9 752 aa9.47□□□□□ -0.89
SF3B2-204ENST00000525207 PDCD6IPQ8WUM4 868 aaKnown RBP9.47□□□□□ -0.89
SF3B2-204ENST00000525207 NSMCE1Q8WV22 266 aa9.47□□□□□ -0.89
SF3B2-204ENST00000525207 OR1E3Q8WZA6 343 aa9.47□□□□□ -0.89
SF3B2-204ENST00000525207 FUBP1Q96AE4 644 aaKnown RBP9.47□□□□□ -0.89
SF3B2-204ENST00000525207 FAF2Q96CS3 445 aa9.47□□□□□ -0.89
SF3B2-204ENST00000525207 NUS1Q96E22 293 aa9.47□□□□□ -0.89
SF3B2-204ENST00000525207 CRELD1Q96HD1 420 aa9.47□□□□□ -0.89
SF3B2-204ENST00000525207 COQ10AQ96MF6 247 aa9.47□□□□□ -0.89
SF3B2-204ENST00000525207 MCCC1Q96RQ3 725 aaPredicted RBP9.47□□□□□ -0.89
SF3B2-204ENST00000525207 RBM15Q96T37 977 aaKnown RBP eCLIP9.47□□□□□ -0.89
SF3B2-204ENST00000525207 CCDC3Q9BQI4 270 aa9.47□□□□□ -0.89
SF3B2-204ENST00000525207 ABCG4Q9H172 646 aa9.47□□□□□ -0.89
SF3B2-204ENST00000525207 CTTNBP2NLQ9P2B4 639 aa9.47□□□□□ -0.89
SF3B2-204ENST00000525207 DOLKQ9UPQ8 538 aa9.47□□□□□ -0.89
SF3B2-204ENST00000525207 PCDHGC4Q9Y5F7 938 aa9.47□□□□□ -0.89
SF3B2-204ENST00000525207 ATRXP46100 2492 aa9.46□□□□□ -0.89
SF3B2-204ENST00000525207 IGSF10Q6WRI0 2623 aa9.46□□□□□ -0.89
SF3B2-204ENST00000525207 SSU72P8A0A1W2PR75 194 aa9.46□□□□□ -0.9
SF3B2-204ENST00000525207 TMEM202A6NGA9 273 aa9.46□□□□□ -0.9
SF3B2-204ENST00000525207 PSMD11O00231 422 aa9.46□□□□□ -0.9
SF3B2-204ENST00000525207 TNFRSF10CO14798 259 aa9.46□□□□□ -0.9
SF3B2-204ENST00000525207 CASC3O15234 703 aaKnown RBP9.46□□□□□ -0.9
SF3B2-204ENST00000525207 CBFA2T2O43439 604 aa9.46□□□□□ -0.9
SF3B2-204ENST00000525207 MFAP3LO75121 409 aa9.46□□□□□ -0.9
SF3B2-204ENST00000525207 USP12O75317 370 aa9.46□□□□□ -0.9
SF3B2-204ENST00000525207 PGLSO95336 258 aa9.46□□□□□ -0.9
SF3B2-204ENST00000525207 MAP3K6O95382 1288 aa9.46□□□□□ -0.9
SF3B2-204ENST00000525207 HOXC4P09017 264 aaPredicted RBP9.46□□□□□ -0.9
SF3B2-204ENST00000525207 H2AFZP0C0S5 128 aa9.46□□□□□ -0.9
SF3B2-204ENST00000525207 MYCLP1P12525 358 aaPredicted RBP9.46□□□□□ -0.9
SF3B2-204ENST00000525207 CTSEP14091 401 aa9.46□□□□□ -0.9
SF3B2-204ENST00000525207 KELP23276 732 aa9.46□□□□□ -0.9
SF3B2-204ENST00000525207 NFKBIAP25963 317 aa9.46□□□□□ -0.9
SF3B2-204ENST00000525207 ITPKBP27987 946 aa9.46□□□□□ -0.9
SF3B2-204ENST00000525207 ACTN2P35609 894 aa9.46□□□□□ -0.9
SF3B2-204ENST00000525207 TRIM23P36406 574 aa9.46□□□□□ -0.9
SF3B2-204ENST00000525207 SSR1P43307 286 aaKnown RBP9.46□□□□□ -0.9
SF3B2-204ENST00000525207 TAS2R40P59535 323 aa9.46□□□□□ -0.9
SF3B2-204ENST00000525207 ACOX1Q15067 660 aa9.46□□□□□ -0.9
SF3B2-204ENST00000525207 PAFAH1B3Q15102 231 aaKnown RBP9.46□□□□□ -0.9
SF3B2-204ENST00000525207 ATP13A4Q4VNC1 1196 aa9.46□□□□□ -0.9
SF3B2-204ENST00000525207 TIGD7Q6NT04 549 aaPredicted RBP9.46□□□□□ -0.9
SF3B2-204ENST00000525207 IGF2-ASQ6U949 168 aa9.46□□□□□ -0.9
SF3B2-204ENST00000525207 RBM44Q6ZP01 1051 aaKnown RBP9.46□□□□□ -0.9
SF3B2-204ENST00000525207 USP45Q70EL2 814 aa9.46□□□□□ -0.9
SF3B2-204ENST00000525207 H2AFVQ71UI9 128 aa9.46□□□□□ -0.9
SF3B2-204ENST00000525207 RD3Q7Z3Z2 195 aa9.46□□□□□ -0.9
SF3B2-204ENST00000525207 TEX26Q8N6G2 289 aa9.46□□□□□ -0.9
SF3B2-204ENST00000525207 WDR48Q8TAF3 677 aa9.46□□□□□ -0.9
SF3B2-204ENST00000525207 SCG3Q8WXD2 468 aaKnown RBP9.46□□□□□ -0.9
SF3B2-204ENST00000525207 MAML1Q92585 1016 aa9.46□□□□□ -0.9
SF3B2-204ENST00000525207 FGF11Q92914 225 aa9.46□□□□□ -0.9
SF3B2-204ENST00000525207 GRAMD1AQ96CP6 724 aa9.46□□□□□ -0.9
SF3B2-204ENST00000525207 DTD2Q96FN9 168 aa9.46□□□□□ -0.9
SF3B2-204ENST00000525207 POLR1EQ9GZS1 481 aaKnown RBP9.46□□□□□ -0.9
SF3B2-204ENST00000525207 POLR1BQ9H9Y6 1135 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms