RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 METTL5Q9NRN9 209 aaKnown RBP11.68□□□□□ -0.54
SDCBP-211ENST00000523441 PCDHGC3Q9UN70 934 aa11.68□□□□□ -0.54
SDCBP-211ENST00000523441 DGKBQ9Y6T7 804 aa11.68□□□□□ -0.54
SDCBP-211ENST00000523441 PRSS38A1L453 326 aa11.67□□□□□ -0.54
SDCBP-211ENST00000523441 KDELR3O43731 214 aa11.67□□□□□ -0.54
SDCBP-211ENST00000523441 SEMA7AO75326 666 aa11.67□□□□□ -0.54
SDCBP-211ENST00000523441 RECQL5O94762 991 aaPredicted RBP11.67□□□□□ -0.54
SDCBP-211ENST00000523441 FGF1P05230 155 aa11.67□□□□□ -0.54
SDCBP-211ENST00000523441 RHOQP17081 205 aa11.67□□□□□ -0.54
SDCBP-211ENST00000523441 MAPK9P45984 424 aa11.67□□□□□ -0.54
SDCBP-211ENST00000523441 COBLL1Q53SF7 1204 aa11.67□□□□□ -0.54
SDCBP-211ENST00000523441 TTI2Q6NXR4 508 aa11.67□□□□□ -0.54
SDCBP-211ENST00000523441 DOK6Q6PKX4 331 aa11.67□□□□□ -0.54
SDCBP-211ENST00000523441 ASB18Q6ZVZ8 466 aa11.67□□□□□ -0.54
SDCBP-211ENST00000523441 TIPARPQ7Z3E1 657 aaKnown RBP11.67□□□□□ -0.54
SDCBP-211ENST00000523441 HEATR4Q86WZ0 1026 aa11.67□□□□□ -0.54
SDCBP-211ENST00000523441 ZSWIM9Q86XI8 627 aa11.67□□□□□ -0.54
SDCBP-211ENST00000523441 XYLT1Q86Y38 959 aa11.67□□□□□ -0.54
SDCBP-211ENST00000523441 CAMK1DQ8IU85 385 aa11.67□□□□□ -0.54
SDCBP-211ENST00000523441 PELI3Q8N2H9 469 aa11.67□□□□□ -0.54
SDCBP-211ENST00000523441 SSC4DQ8WTU2 575 aa11.67□□□□□ -0.54
SDCBP-211ENST00000523441 C18orf8Q96DM3 657 aa11.67□□□□□ -0.54
SDCBP-211ENST00000523441 AHCYL2Q96HN2 611 aaKnown RBP11.67□□□□□ -0.54
SDCBP-211ENST00000523441 ASPSCR1Q9BZE9 553 aa11.67□□□□□ -0.54
SDCBP-211ENST00000523441 MAGEH1Q9H213 219 aa11.67□□□□□ -0.54
SDCBP-211ENST00000523441 SUV39H2Q9H5I1 410 aa11.67□□□□□ -0.54
SDCBP-211ENST00000523441 WDR26Q9H7D7 661 aa11.67□□□□□ -0.54
SDCBP-211ENST00000523441 APMAPQ9HDC9 416 aa11.67□□□□□ -0.54
SDCBP-211ENST00000523441 CASS4Q9NQ75 786 aa11.67□□□□□ -0.54
SDCBP-211ENST00000523441 TAAR2Q9P1P5 351 aa11.67□□□□□ -0.54
SDCBP-211ENST00000523441 MAP10Q9P2G4 905 aa11.67□□□□□ -0.54
SDCBP-211ENST00000523441 MAN1B1Q9UKM7 699 aa11.67□□□□□ -0.54
SDCBP-211ENST00000523441 PLEKHM1Q9Y4G2 1056 aa11.67□□□□□ -0.54
SDCBP-211ENST00000523441 PCDHGA3Q9Y5H0 932 aa11.67□□□□□ -0.54
SDCBP-211ENST00000523441 GOLGA6L4A6NEF3 574 aa11.66□□□□□ -0.54
SDCBP-211ENST00000523441 PPM1DO15297 605 aa11.66□□□□□ -0.54
SDCBP-211ENST00000523441 ZW10O43264 779 aa11.66□□□□□ -0.54
SDCBP-211ENST00000523441 KATNA1O75449 491 aa11.66□□□□□ -0.54
SDCBP-211ENST00000523441 LRIG2O94898 1065 aa11.66□□□□□ -0.54
SDCBP-211ENST00000523441 ELFN1P0C7U0 828 aa11.66□□□□□ -0.54
SDCBP-211ENST00000523441 CCNB1P14635 433 aa11.66□□□□□ -0.54
SDCBP-211ENST00000523441 KELP23276 732 aa11.66□□□□□ -0.54
SDCBP-211ENST00000523441 CLCN1P35523 988 aa11.66□□□□□ -0.54
SDCBP-211ENST00000523441 NOP2P46087 812 aaKnown RBP11.66□□□□□ -0.54
SDCBP-211ENST00000523441 POLD2P49005 469 aa11.66□□□□□ -0.54
SDCBP-211ENST00000523441 MAPKAPK2P49137 400 aa11.66□□□□□ -0.54
SDCBP-211ENST00000523441 COPB1P53618 953 aaKnown RBP11.66□□□□□ -0.54
SDCBP-211ENST00000523441 KIAA1024LP59773 190 aa11.66□□□□□ -0.54
SDCBP-211ENST00000523441 ILF3Q12906 894 aaKnown RBP eCLIP11.66□□□□□ -0.54
SDCBP-211ENST00000523441 ERV3-1Q14264 604 aa11.66□□□□□ -0.54
SDCBP-211ENST00000523441 NLRP14Q86W24 1093 aa11.66□□□□□ -0.54
SDCBP-211ENST00000523441 NRROSQ86YC3 692 aa11.66□□□□□ -0.54
SDCBP-211ENST00000523441 ZDHHC17Q8IUH5 632 aa11.66□□□□□ -0.54
SDCBP-211ENST00000523441 FMR1NBQ8N0W7 255 aaPredicted RBP11.66□□□□□ -0.54
SDCBP-211ENST00000523441 PYROXD2Q8N2H3 581 aa11.66□□□□□ -0.54
SDCBP-211ENST00000523441 TMEM35BQ8NCS4 154 aa11.66□□□□□ -0.54
SDCBP-211ENST00000523441 SPATA20Q8TB22 786 aa11.66□□□□□ -0.54
SDCBP-211ENST00000523441 PTCD2Q8WV60 388 aaKnown RBP11.66□□□□□ -0.54
SDCBP-211ENST00000523441 NT5C3BQ969T7 300 aa11.66□□□□□ -0.54
SDCBP-211ENST00000523441 TBC1D31Q96DN5 1066 aa11.66□□□□□ -0.54
SDCBP-211ENST00000523441 PGAP3Q96FM1 320 aaPredicted RBP11.66□□□□□ -0.54
SDCBP-211ENST00000523441 DDA1Q9BW61 102 aa11.66□□□□□ -0.54
SDCBP-211ENST00000523441 GSDMCQ9BYG8 508 aa11.66□□□□□ -0.54
SDCBP-211ENST00000523441 TMEM248Q9NWD8 314 aa11.66□□□□□ -0.54
SDCBP-211ENST00000523441 PPARGC1AQ9UBK2 798 aaKnown RBP11.66□□□□□ -0.54
SDCBP-211ENST00000523441 DKK3Q9UBP4 350 aa11.66□□□□□ -0.54
SDCBP-211ENST00000523441 LHX3Q9UBR4 397 aa11.66□□□□□ -0.54
SDCBP-211ENST00000523441 APEX2Q9UBZ4 518 aa11.66□□□□□ -0.54
SDCBP-211ENST00000523441 PILRAQ9UKJ1 303 aa11.66□□□□□ -0.54
SDCBP-211ENST00000523441 ATP8A1Q9Y2Q0 1164 aa11.66□□□□□ -0.54
SDCBP-211ENST00000523441 ZDHHC9Q9Y397 364 aa11.66□□□□□ -0.54
SDCBP-211ENST00000523441 LRBAP50851 2863 aa11.65□□□□□ -0.54
SDCBP-211ENST00000523441 IGHV1OR21-1A0A087WYE8 117 aa11.65□□□□□ -0.54
SDCBP-211ENST00000523441 MKRN2OSH3BPM6 223 aa11.65□□□□□ -0.54
SDCBP-211ENST00000523441 FOXN3O00409 490 aaPredicted RBP11.65□□□□□ -0.54
SDCBP-211ENST00000523441 CAPN5O15484 640 aaPredicted RBP11.65□□□□□ -0.54
SDCBP-211ENST00000523441 BUB1BO60566 1050 aaPredicted RBP11.65□□□□□ -0.54
SDCBP-211ENST00000523441 THRAP10827 490 aa11.65□□□□□ -0.54
SDCBP-211ENST00000523441 MAP4P27816 1152 aaKnown RBP11.65□□□□□ -0.54
SDCBP-211ENST00000523441 MMP12P39900 470 aa11.65□□□□□ -0.54
SDCBP-211ENST00000523441 CD97P48960 835 aa11.65□□□□□ -0.54
SDCBP-211ENST00000523441 CYTH1Q15438 398 aa11.65□□□□□ -0.54
SDCBP-211ENST00000523441 CAPRIN2Q6IMN6 1127 aaKnown RBP11.65□□□□□ -0.54
SDCBP-211ENST00000523441 GBP6Q6ZN66 633 aa11.65□□□□□ -0.54
SDCBP-211ENST00000523441 TMEM135Q86UB9 458 aa11.65□□□□□ -0.54
SDCBP-211ENST00000523441 SRRM1Q8IYB3 904 aaKnown RBP11.65□□□□□ -0.54
SDCBP-211ENST00000523441 CCDC185Q8N715 623 aa11.65□□□□□ -0.54
SDCBP-211ENST00000523441 SPDYE1Q8NFV5 336 aaPredicted RBP11.65□□□□□ -0.54
SDCBP-211ENST00000523441 OR4D9Q8NGE8 314 aa11.65□□□□□ -0.54
SDCBP-211ENST00000523441 CPA5Q8WXQ8 436 aa11.65□□□□□ -0.54
SDCBP-211ENST00000523441 SHC3Q92529 594 aa11.65□□□□□ -0.54
SDCBP-211ENST00000523441 RTP4Q96DX8 246 aa11.65□□□□□ -0.54
SDCBP-211ENST00000523441 B3GNT4Q9C0J1 378 aa11.65□□□□□ -0.54
SDCBP-211ENST00000523441 PRDM8Q9NQV8 689 aa11.65□□□□□ -0.54
SDCBP-211ENST00000523441 DNAJC12Q9UKB3 198 aa11.65□□□□□ -0.54
SDCBP-211ENST00000523441 SUFUQ9UMX1 484 aa11.65□□□□□ -0.54
SDCBP-211ENST00000523441 CRYBG3Q68DQ2 2970 aa11.64□□□□□ -0.55
SDCBP-211ENST00000523441 RP1L1Q8IWN7 2480 aaPredicted RBP11.64□□□□□ -0.55
SDCBP-211ENST00000523441 ZNF106Q9H2Y7 1883 aaKnown RBP11.64□□□□□ -0.55
SDCBP-211ENST00000523441 BICDL2A1A5D9 508 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms