RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 LRRC53A6NM62 1247 aa15.48■□□□□ 0.07
MRPS28-209ENST00000522987 EFSO43281 561 aa15.48■□□□□ 0.07
MRPS28-209ENST00000522987 NOBOXO60393 691 aa15.48■□□□□ 0.07
MRPS28-209ENST00000522987 JMJD7P0C870 316 aa15.48■□□□□ 0.07
MRPS28-209ENST00000522987 GOLGA6DP0CG33 693 aa15.48■□□□□ 0.07
MRPS28-209ENST00000522987 MIPP30301 263 aa15.48■□□□□ 0.07
MRPS28-209ENST00000522987 MAPK10P53779 464 aa15.48■□□□□ 0.07
MRPS28-209ENST00000522987 AIF1P55008 147 aa15.48■□□□□ 0.07
MRPS28-209ENST00000522987 SLC10A7Q0GE19 358 aa15.48■□□□□ 0.07
MRPS28-209ENST00000522987 NCAPHQ15003 741 aa15.48■□□□□ 0.07
MRPS28-209ENST00000522987 PHF19Q5T6S3 580 aa15.48■□□□□ 0.07
MRPS28-209ENST00000522987 LVRNQ6Q4G3 990 aa15.48■□□□□ 0.07
MRPS28-209ENST00000522987 RBM43Q6ZSC3 357 aaKnown RBP15.48■□□□□ 0.07
MRPS28-209ENST00000522987 CYP4V2Q6ZWL3 525 aaPredicted RBP15.48■□□□□ 0.07
MRPS28-209ENST00000522987 DPPA4Q7L190 304 aa15.48■□□□□ 0.07
MRPS28-209ENST00000522987 VASH2Q86V25 355 aa15.48■□□□□ 0.07
MRPS28-209ENST00000522987 GPR156Q8NFN8 814 aa15.48■□□□□ 0.07
MRPS28-209ENST00000522987 ATL2Q8NHH9 583 aa15.48■□□□□ 0.07
MRPS28-209ENST00000522987 HCAR2Q8TDS4 363 aa15.48■□□□□ 0.07
MRPS28-209ENST00000522987 PTCD2Q8WV60 388 aaKnown RBP15.48■□□□□ 0.07
MRPS28-209ENST00000522987 CCNL2Q96S94 520 aaPredicted RBP15.48■□□□□ 0.07
MRPS28-209ENST00000522987 STRADBQ9C0K7 418 aa15.48■□□□□ 0.07
MRPS28-209ENST00000522987 GOLGA6AQ9NYA3 693 aa15.48■□□□□ 0.07
MRPS28-209ENST00000522987 B4GALT6Q9UBX8 382 aa15.48■□□□□ 0.07
MRPS28-209ENST00000522987 PCDHGC4Q9Y5F7 938 aa15.48■□□□□ 0.07
MRPS28-209ENST00000522987 J3QKU1 62 aa15.47■□□□□ 0.07
MRPS28-209ENST00000522987 PRPSAP2O60256 369 aa15.47■□□□□ 0.07
MRPS28-209ENST00000522987 TCF4P15884 667 aa15.47■□□□□ 0.07
MRPS28-209ENST00000522987 KIAA1024LP59773 190 aa15.47■□□□□ 0.07
MRPS28-209ENST00000522987 ASIC2Q16515 512 aa15.47■□□□□ 0.07
MRPS28-209ENST00000522987 SMTNL2Q2TAL5 461 aa15.47■□□□□ 0.07
MRPS28-209ENST00000522987 AMZ1Q400G9 498 aa15.47■□□□□ 0.07
MRPS28-209ENST00000522987 E4F1Q66K89 784 aaPredicted RBP15.47■□□□□ 0.07
MRPS28-209ENST00000522987 SPECC1LQ69YQ0 1117 aa15.47■□□□□ 0.07
MRPS28-209ENST00000522987 ZFAND4Q86XD8 727 aa15.47■□□□□ 0.07
MRPS28-209ENST00000522987 JPH3Q8WXH2 748 aaPredicted RBP15.47■□□□□ 0.07
MRPS28-209ENST00000522987 ZNF653Q96CK0 615 aa15.47■□□□□ 0.07
MRPS28-209ENST00000522987 SYT11Q9BT88 431 aa15.47■□□□□ 0.07
MRPS28-209ENST00000522987 RDH14Q9HBH5 336 aa15.47■□□□□ 0.07
MRPS28-209ENST00000522987 PARVAQ9NVD7 372 aa15.47■□□□□ 0.07
MRPS28-209ENST00000522987 ETNK2Q9NVF9 386 aa15.47■□□□□ 0.07
MRPS28-209ENST00000522987 CWC15Q9P013 229 aaKnown RBP15.47■□□□□ 0.07
MRPS28-209ENST00000522987 LRIT1Q9P2V4 623 aa15.47■□□□□ 0.07
MRPS28-209ENST00000522987 CNOT8Q9UFF9 292 aaKnown RBP15.47■□□□□ 0.07
MRPS28-209ENST00000522987 PRAMEF33A0A0G2JMD5 474 aa15.46■□□□□ 0.07
MRPS28-209ENST00000522987 PRSS38A1L453 326 aa15.46■□□□□ 0.07
MRPS28-209ENST00000522987 PRAMEF10O60809 474 aa15.46■□□□□ 0.07
MRPS28-209ENST00000522987 RNF8O76064 485 aa15.46■□□□□ 0.07
MRPS28-209ENST00000522987 AMPD1P23109 780 aa15.46■□□□□ 0.07
MRPS28-209ENST00000522987 AK4P27144 223 aaPredicted RBP15.46■□□□□ 0.07
MRPS28-209ENST00000522987 MAXP61244 160 aa15.46■□□□□ 0.07
MRPS28-209ENST00000522987 IL10RBQ08334 325 aa15.46■□□□□ 0.07
MRPS28-209ENST00000522987 ARHGEF7Q14155 803 aa15.46■□□□□ 0.07
MRPS28-209ENST00000522987 ZNF235Q14590 738 aa15.46■□□□□ 0.07
MRPS28-209ENST00000522987 LBRQ14739 615 aaKnown RBP15.46■□□□□ 0.07
MRPS28-209ENST00000522987 AGERQ15109 404 aa15.46■□□□□ 0.07
MRPS28-209ENST00000522987 MAP9Q49MG5 647 aa15.46■□□□□ 0.07
MRPS28-209ENST00000522987 C14orf28Q4W4Y0 310 aa15.46■□□□□ 0.07
MRPS28-209ENST00000522987 CERCAMQ5T4B2 595 aa15.46■□□□□ 0.07
MRPS28-209ENST00000522987 AFMIDQ63HM1 303 aa15.46■□□□□ 0.07
MRPS28-209ENST00000522987 PLEKHA7Q6IQ23 1121 aa15.46■□□□□ 0.07
MRPS28-209ENST00000522987 PNCKQ6P2M8 343 aa15.46■□□□□ 0.07
MRPS28-209ENST00000522987 SPRED1Q7Z699 444 aa15.46■□□□□ 0.07
MRPS28-209ENST00000522987 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.46■□□□□ 0.07
MRPS28-209ENST00000522987 PATE1Q8WXA2 126 aa15.46■□□□□ 0.07
MRPS28-209ENST00000522987 HSPH1Q92598 858 aa15.46■□□□□ 0.07
MRPS28-209ENST00000522987 ECHDC3Q96DC8 303 aa15.46■□□□□ 0.07
MRPS28-209ENST00000522987 NUS1Q96E22 293 aa15.46■□□□□ 0.07
MRPS28-209ENST00000522987 TMEM74Q96NL1 305 aa15.46■□□□□ 0.07
MRPS28-209ENST00000522987 SMIM14Q96QK8 99 aa15.46■□□□□ 0.07
MRPS28-209ENST00000522987 SEMA6CQ9H3T2 930 aa15.46■□□□□ 0.07
MRPS28-209ENST00000522987 HAUS4Q9H6D7 363 aa15.46■□□□□ 0.07
MRPS28-209ENST00000522987 WDR26Q9H7D7 661 aa15.46■□□□□ 0.07
MRPS28-209ENST00000522987 ZWILCHQ9H900 591 aa15.46■□□□□ 0.07
MRPS28-209ENST00000522987 CARS2Q9HA77 564 aaKnown RBP15.46■□□□□ 0.07
MRPS28-209ENST00000522987 SPATS2LQ9NUQ6 558 aaKnown RBP15.46■□□□□ 0.07
MRPS28-209ENST00000522987 FOXJ2Q9P0K8 574 aa15.46■□□□□ 0.07
MRPS28-209ENST00000522987 SSUH2Q9Y2M2 353 aa15.46■□□□□ 0.07
MRPS28-209ENST00000522987 DGKBQ9Y6T7 804 aa15.46■□□□□ 0.07
MRPS28-209ENST00000522987 FLNBO75369 2602 aaKnown RBP15.45■□□□□ 0.06
MRPS28-209ENST00000522987 TMEM191CA6NGB0 347 aa15.45■□□□□ 0.06
MRPS28-209ENST00000522987 TRAFD1O14545 582 aaPredicted RBP15.45■□□□□ 0.06
MRPS28-209ENST00000522987 LRCH4O75427 683 aa15.45■□□□□ 0.06
MRPS28-209ENST00000522987 CPP00450 1065 aa15.45■□□□□ 0.06
MRPS28-209ENST00000522987 FTLP02792 175 aaPredicted RBP15.45■□□□□ 0.06
MRPS28-209ENST00000522987 CCDC172P0C7W6 258 aa15.45■□□□□ 0.06
MRPS28-209ENST00000522987 SKILP12757 684 aa15.45■□□□□ 0.06
MRPS28-209ENST00000522987 GLB1P16278 677 aa15.45■□□□□ 0.06
MRPS28-209ENST00000522987 CTPS1P17812 591 aa15.45■□□□□ 0.06
MRPS28-209ENST00000522987 ALDH4A1P30038 563 aa15.45■□□□□ 0.06
MRPS28-209ENST00000522987 HTR7P34969 479 aa15.45■□□□□ 0.06
MRPS28-209ENST00000522987 GNPDA1P46926 289 aa15.45■□□□□ 0.06
MRPS28-209ENST00000522987 CSNK1DP48730 415 aa15.45■□□□□ 0.06
MRPS28-209ENST00000522987 POLD2P49005 469 aa15.45■□□□□ 0.06
MRPS28-209ENST00000522987 OR1D5P58170 312 aa15.45■□□□□ 0.06
MRPS28-209ENST00000522987 NFKB2Q00653 900 aa15.45■□□□□ 0.06
MRPS28-209ENST00000522987 CNGA3Q16281 694 aa15.45■□□□□ 0.06
MRPS28-209ENST00000522987 DOK6Q6PKX4 331 aa15.45■□□□□ 0.06
MRPS28-209ENST00000522987 RFLNAQ6ZTI6 216 aa15.45■□□□□ 0.06
MRPS28-209ENST00000522987 USP53Q70EK8 1073 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms