RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 LRRC72A6NJI9 287 aa6.53□□□□□ -1.36
VPS13B-211ENST00000522802 SCDO00767 359 aa6.53□□□□□ -1.36
VPS13B-211ENST00000522802 TIMM44O43615 452 aa6.53□□□□□ -1.36
VPS13B-211ENST00000522802 RTN2O75298 545 aa6.53□□□□□ -1.36
VPS13B-211ENST00000522802 PPFIA2O75334 1257 aa6.53□□□□□ -1.36
VPS13B-211ENST00000522802 TNFSF15O95150 251 aa6.53□□□□□ -1.36
VPS13B-211ENST00000522802 LDHAP00338 332 aaKnown RBP6.53□□□□□ -1.36
VPS13B-211ENST00000522802 GP1BAP07359 652 aa6.53□□□□□ -1.36
VPS13B-211ENST00000522802 ENO2P09104 434 aaPredicted RBP6.53□□□□□ -1.36
VPS13B-211ENST00000522802 WT1P19544 449 aaPredicted RBP6.53□□□□□ -1.36
VPS13B-211ENST00000522802 ADORA2BP29275 332 aa6.53□□□□□ -1.36
VPS13B-211ENST00000522802 MAT2AP31153 395 aaKnown RBP6.53□□□□□ -1.36
VPS13B-211ENST00000522802 CD70P32970 193 aa6.53□□□□□ -1.36
VPS13B-211ENST00000522802 CYP4F2P78329 520 aa6.53□□□□□ -1.36
VPS13B-211ENST00000522802 IRF9Q00978 393 aa6.53□□□□□ -1.36
VPS13B-211ENST00000522802 DBPQ10586 325 aaPredicted RBP6.53□□□□□ -1.36
VPS13B-211ENST00000522802 ADAM9Q13443 819 aa6.53□□□□□ -1.36
VPS13B-211ENST00000522802 DRAP1Q14919 205 aaPredicted RBP6.53□□□□□ -1.36
VPS13B-211ENST00000522802 SEPT7Q16181 437 aaKnown RBP6.53□□□□□ -1.36
VPS13B-211ENST00000522802 TBR1Q16650 682 aa6.53□□□□□ -1.36
VPS13B-211ENST00000522802 SKIDA1Q1XH10 827 aa6.53□□□□□ -1.36
VPS13B-211ENST00000522802 POM121L1PQ3SYA9 428 aa6.53□□□□□ -1.36
VPS13B-211ENST00000522802 SLC45A4Q5BKX6 768 aa6.53□□□□□ -1.36
VPS13B-211ENST00000522802 CD276Q5ZPR3 534 aa6.53□□□□□ -1.36
VPS13B-211ENST00000522802 GUSBP11Q6P575 273 aa6.53□□□□□ -1.36
VPS13B-211ENST00000522802 CRTC1Q6UUV9 634 aa6.53□□□□□ -1.36
VPS13B-211ENST00000522802 LIPIQ6XZB0 460 aa6.53□□□□□ -1.36
VPS13B-211ENST00000522802 STK32CQ86UX6 486 aa6.53□□□□□ -1.36
VPS13B-211ENST00000522802 VASH2Q86V25 355 aa6.53□□□□□ -1.36
VPS13B-211ENST00000522802 MMAAQ8IVH4 418 aaKnown RBP6.53□□□□□ -1.36
VPS13B-211ENST00000522802 SYCP3Q8IZU3 236 aa6.53□□□□□ -1.36
VPS13B-211ENST00000522802 CPXM2Q8N436 756 aa6.53□□□□□ -1.36
VPS13B-211ENST00000522802 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.53□□□□□ -1.36
VPS13B-211ENST00000522802 C12orf29Q8N999 325 aa6.53□□□□□ -1.36
VPS13B-211ENST00000522802 KYQ8NBH2 561 aa6.53□□□□□ -1.36
VPS13B-211ENST00000522802 RASSF8Q8NHQ8 419 aa6.53□□□□□ -1.36
VPS13B-211ENST00000522802 IFI44Q8TCB0 444 aa6.53□□□□□ -1.36
VPS13B-211ENST00000522802 MAPK15Q8TD08 544 aa6.53□□□□□ -1.36
VPS13B-211ENST00000522802 WFIKKN2Q8TEU8 576 aa6.53□□□□□ -1.36
VPS13B-211ENST00000522802 HTR3CQ8WXA8 447 aa6.53□□□□□ -1.36
VPS13B-211ENST00000522802 DNAJC19Q96DA6 116 aa6.53□□□□□ -1.36
VPS13B-211ENST00000522802 SGF29Q96ES7 293 aa6.53□□□□□ -1.36
VPS13B-211ENST00000522802 CALML4Q96GE6 196 aa6.53□□□□□ -1.36
VPS13B-211ENST00000522802 APOLD1Q96LR9 279 aa6.53□□□□□ -1.36
VPS13B-211ENST00000522802 CGRRF1Q99675 332 aa6.53□□□□□ -1.36
VPS13B-211ENST00000522802 MYOCQ99972 504 aa6.53□□□□□ -1.36
VPS13B-211ENST00000522802 OMDQ99983 421 aa6.53□□□□□ -1.36
VPS13B-211ENST00000522802 FUCA2Q9BTY2 467 aa6.53□□□□□ -1.36
VPS13B-211ENST00000522802 SLC2A11Q9BYW1 496 aa6.53□□□□□ -1.36
VPS13B-211ENST00000522802 ARHGAP20Q9P2F6 1191 aa6.53□□□□□ -1.36
VPS13B-211ENST00000522802 FZD4Q9ULV1 537 aa6.53□□□□□ -1.36
VPS13B-211ENST00000522802 PLA2G4CQ9UP65 541 aa6.53□□□□□ -1.36
VPS13B-211ENST00000522802 PRKAB1Q9Y478 270 aa6.53□□□□□ -1.36
VPS13B-211ENST00000522802 PCDHGA8Q9Y5G5 932 aa6.53□□□□□ -1.36
VPS13B-211ENST00000522802 PMF1-BGLAPU3KQ54 211 aa6.53□□□□□ -1.36
VPS13B-211ENST00000522802 LRRK1Q38SD2 2015 aa6.53□□□□□ -1.36
VPS13B-211ENST00000522802 UBE4BO95155 1302 aa6.52□□□□□ -1.37
VPS13B-211ENST00000522802 ADGRG4Q8IZF6 3080 aa6.52□□□□□ -1.37
VPS13B-211ENST00000522802 ZNF233A6NK53 670 aa6.52□□□□□ -1.37
VPS13B-211ENST00000522802 DVL2O14641 736 aa6.52□□□□□ -1.37
VPS13B-211ENST00000522802 SLC26A4O43511 780 aa6.52□□□□□ -1.37
VPS13B-211ENST00000522802 NOBOXO60393 691 aa6.52□□□□□ -1.37
VPS13B-211ENST00000522802 NEBLO76041 1014 aa6.52□□□□□ -1.37
VPS13B-211ENST00000522802 FAM200BP0CF97 657 aa6.52□□□□□ -1.37
VPS13B-211ENST00000522802 CFPP27918 469 aa6.52□□□□□ -1.37
VPS13B-211ENST00000522802 SDHAP31040 664 aa6.52□□□□□ -1.37
VPS13B-211ENST00000522802 SLC8A1P32418 973 aa6.52□□□□□ -1.37
VPS13B-211ENST00000522802 HOXD13P35453 343 aa6.52□□□□□ -1.37
VPS13B-211ENST00000522802 DRD3P35462 400 aa6.52□□□□□ -1.37
VPS13B-211ENST00000522802 UBA7P41226 1012 aa6.52□□□□□ -1.37
VPS13B-211ENST00000522802 DUSP3P51452 185 aaPredicted RBP6.52□□□□□ -1.37
VPS13B-211ENST00000522802 NDST1P52848 882 aa6.52□□□□□ -1.37
VPS13B-211ENST00000522802 ANAPC15P60006 121 aa6.52□□□□□ -1.37
VPS13B-211ENST00000522802 E2F5Q15329 346 aa6.52□□□□□ -1.37
VPS13B-211ENST00000522802 SNRNP35Q16560 246 aaKnown RBP6.52□□□□□ -1.37
VPS13B-211ENST00000522802 CDKN3Q16667 212 aa6.52□□□□□ -1.37
VPS13B-211ENST00000522802 ZNF699Q32M78 642 aa6.52□□□□□ -1.37
VPS13B-211ENST00000522802 HNRNPA1L2Q32P51 320 aaKnown RBP6.52□□□□□ -1.37
VPS13B-211ENST00000522802 VWA3BQ502W6 1294 aa6.52□□□□□ -1.37
VPS13B-211ENST00000522802 C9orf64Q5T6V5 341 aa6.52□□□□□ -1.37
VPS13B-211ENST00000522802 ARL6IP4Q66PJ3 421 aaKnown RBP6.52□□□□□ -1.37
VPS13B-211ENST00000522802 ZNF662Q6ZS27 426 aa6.52□□□□□ -1.37
VPS13B-211ENST00000522802 CCDC186Q7Z3E2 898 aa6.52□□□□□ -1.37
VPS13B-211ENST00000522802 OR14C36Q8NHC7 312 aa6.52□□□□□ -1.37
VPS13B-211ENST00000522802 ZNF564Q8TBZ8 553 aaPredicted RBP6.52□□□□□ -1.37
VPS13B-211ENST00000522802 HPS3Q969F9 1004 aa6.52□□□□□ -1.37
VPS13B-211ENST00000522802 CCDC127Q96BQ5 260 aa6.52□□□□□ -1.37
VPS13B-211ENST00000522802 ZBTB8AQ96BR9 441 aa6.52□□□□□ -1.37
VPS13B-211ENST00000522802 TNIP3Q96KP6 325 aa6.52□□□□□ -1.37
VPS13B-211ENST00000522802 AK8Q96MA6 479 aa6.52□□□□□ -1.37
VPS13B-211ENST00000522802 TWNKQ96RR1 684 aa6.52□□□□□ -1.37
VPS13B-211ENST00000522802 SEMA3CQ99985 751 aa6.52□□□□□ -1.37
VPS13B-211ENST00000522802 LLPHQ9BRT6 129 aaKnown RBP6.52□□□□□ -1.37
VPS13B-211ENST00000522802 ABCG4Q9H172 646 aa6.52□□□□□ -1.37
VPS13B-211ENST00000522802 OLFML3Q9NRN5 406 aa6.52□□□□□ -1.37
VPS13B-211ENST00000522802 SEL1LQ9UBV2 794 aa6.52□□□□□ -1.37
VPS13B-211ENST00000522802 PLEKHB1Q9UF11 243 aaPredicted RBP6.52□□□□□ -1.37
VPS13B-211ENST00000522802 SCML1Q9UN30 329 aa6.52□□□□□ -1.37
VPS13B-211ENST00000522802 ZNF510Q9Y2H8 683 aa6.52□□□□□ -1.37
VPS13B-211ENST00000522802 KIF3AQ9Y496 699 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms