RNA–Protein interactions for RNA: ENST00000522653.5

TCF7-223, Transcript of transcription factor 7, human

TSL 2

Gene TCF7, Length 5,340 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF7-223	ENST00000522653	FAM71D	Q8N9W8	422 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	COLGALT1	Q8NBJ5	622 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	THUMPD3	Q9BV44	507 aa	Known RBP	10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	TTYH3	Q9C0H2	523 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	SERINC1	Q9NRX5	453 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	UBP1	Q9NZI7	540 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	CNTNAP1	P78357	1384 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	OR5K4	A6NMS3	321 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	CPSF4	O95639	269 aa	Known RBP	10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	NUDT17	P0C025	328 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	AQP5	P55064	265 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	ACTR1A	P61163	376 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	GRB10	Q13322	594 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	QPCT	Q16769	361 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	TMEM63B	Q5T3F8	832 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	UNQ6126/PRO20091	Q6UXV3	157 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	TMEM192	Q8IY95	271 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	KIAA0319L	Q8IZA0	1049 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	TMEM132C	Q8N3T6	1108 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	HTR3C	Q8WXA8	447 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	OVCA2	Q8WZ82	227 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	VPS45	Q9NRW7	570 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	PCDH10	Q9P2E7	1040 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	COPG2	Q9UBF2	871 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	SERTAD3	Q9UJW9	196 aa		10.37	□□□□□ -0.75
TCF7-223	ENST00000522653	PRR23D1	E9PI22	279 aa	Predicted RBP	10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	USP1	O94782	785 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	PRR23D2	P0DMB1	279 aa	Predicted RBP	10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	TOB1	P50616	345 aa	Predicted RBP	10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	RNF220	Q5VTB9	566 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	RAB43	Q86YS6	212 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	TMEM139	Q8IV31	216 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	COPS5	Q92905	334 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	KLHDC7B	Q96G42	594 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	TMEM79	Q9BSE2	394 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	CDT1	Q9H211	546 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	MAGEH1	Q9H213	219 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	ELAC1	Q9H777	363 aa	Known RBP	10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	AVEN	Q9NQS1	362 aa	Predicted RBP	10.36	□□□□□ -0.75
TCF7-223	ENST00000522653		A0A087WXM4	84 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653		A0A0U1RQJ8	604 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	C1orf232	A0A0U1RR37	186 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	TRIM49D1	C9J1S8	452 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653		E9PBE3	544 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	CASK	O14936	926 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	TMCC2	O75069	709 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	CER1	O95813	267 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	JUP	P14923	745 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	RFTN1	Q14699	578 aa	Predicted RBP	10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	PCID2	Q5JVF3	399 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	CERS6	Q6ZMG9	384 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	MICU2	Q8IYU8	434 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	PNPLA2	Q96AD5	504 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	DCUN1D5	Q9BTE7	237 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	EFCAB1	Q9HAE3	211 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	SH3BP4	Q9P0V3	963 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	OR12D3	Q9UGF7	316 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	ACTL7B	Q9Y614	415 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	SLC37A4	O43826	429 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	DLX3	O60479	287 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	CORO1A	P31146	461 aa	Known RBP	10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	NEK3	P51956	506 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	XIAP	P98170	497 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	GRM2	Q14416	872 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	PDK3	Q15120	406 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	CDC73	Q6P1J9	531 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	FAM174A	Q8TBP5	190 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	LCN9	Q8WX39	176 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	NXPE3	Q969Y0	559 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	KAZALD1	Q96I82	304 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	THAP2	Q9H0W7	228 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	NKX2-4	Q9H2Z4	354 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	PDE7B	Q9NP56	450 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	SCML1	Q9UN30	329 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	SLC27A5	Q9Y2P5	690 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	SNX8	Q9Y5X2	465 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	MED1	Q15648	1581 aa	Predicted RBP	10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	C3	P01024	1663 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	CNOT3	O75175	753 aa	Known RBP	10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	CHRNA1	P02708	482 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	PAICS	P22234	425 aa	Known RBP	10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	GLRA2	P23416	452 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	FOXK1	P85037	733 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	STXBP5	Q5T5C0	1151 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	SPOCD1	Q6ZMY3	1216 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	SV2A	Q7L0J3	742 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	OR6Y1	Q8NGX8	325 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	CLP1	Q92989	425 aa	Known RBP	10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	MAGED4	Q96JG8	741 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	NDC1	Q9BTX1	674 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	DDX4	Q9NQI0	724 aa	Known RBP	10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	IGSF9	Q9P2J2	1179 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	GHRL	Q9UBU3	117 aa		10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	PNMA8B	Q9ULN7	279 aa	Predicted RBP	10.36	□□□□□ -0.75
TCF7-223	ENST00000522653	CYP3A7-CYP3A51P	A0A087WV96	503 aa		10.35	□□□□□ -0.75
TCF7-223	ENST00000522653		F8VP50	259 aa		10.35	□□□□□ -0.75
TCF7-223	ENST00000522653	FCGR1A	P12314	374 aa		10.35	□□□□□ -0.75
TCF7-223	ENST00000522653	CYP3A7	P24462	503 aa		10.35	□□□□□ -0.75
TCF7-223	ENST00000522653	CCDC153	Q494R4	210 aa		10.35	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms