RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 TSSK4Q6SA08 328 aa12.43□□□□□ -0.42
PABPC1-219ENST00000522387 AADATQ8N5Z0 425 aa12.43□□□□□ -0.42
PABPC1-219ENST00000522387 PIH1D2Q8WWB5 315 aa12.43□□□□□ -0.42
PABPC1-219ENST00000522387 RLN3Q8WXF3 142 aa12.43□□□□□ -0.42
PABPC1-219ENST00000522387 ARRDC3Q96B67 414 aa12.43□□□□□ -0.42
PABPC1-219ENST00000522387 TADA1Q96BN2 335 aa12.43□□□□□ -0.42
PABPC1-219ENST00000522387 MRGPRX1Q96LB2 322 aa12.43□□□□□ -0.42
PABPC1-219ENST00000522387 TRIB3Q96RU7 358 aa12.43□□□□□ -0.42
PABPC1-219ENST00000522387 GABRG3Q99928 467 aa12.43□□□□□ -0.42
PABPC1-219ENST00000522387 DYRK4Q9NR20 520 aa12.43□□□□□ -0.42
PABPC1-219ENST00000522387 CHRAC1Q9NRG0 131 aa12.43□□□□□ -0.42
PABPC1-219ENST00000522387 MMP17Q9ULZ9 603 aa12.43□□□□□ -0.42
PABPC1-219ENST00000522387 INVSQ9Y283 1065 aa12.43□□□□□ -0.42
PABPC1-219ENST00000522387 SPO11Q9Y5K1 396 aa12.43□□□□□ -0.42
PABPC1-219ENST00000522387 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.43□□□□□ -0.42
PABPC1-219ENST00000522387 CKAP5Q14008 2032 aa12.42□□□□□ -0.42
PABPC1-219ENST00000522387 LOC285095A0A1B0GVY8 99 aa12.42□□□□□ -0.42
PABPC1-219ENST00000522387 NPIPB15A6NHN6 443 aaPredicted RBP12.42□□□□□ -0.42
PABPC1-219ENST00000522387 NEMP1O14524 444 aa12.42□□□□□ -0.42
PABPC1-219ENST00000522387 RNASEH1O60930 286 aaKnown RBP12.42□□□□□ -0.42
PABPC1-219ENST00000522387 ACSL3O95573 720 aa12.42□□□□□ -0.42
PABPC1-219ENST00000522387 PRNPP04156 253 aa12.42□□□□□ -0.42
PABPC1-219ENST00000522387 F7P08709 466 aaPredicted RBP12.42□□□□□ -0.42
PABPC1-219ENST00000522387 TPSB2P20231 275 aa12.42□□□□□ -0.42
PABPC1-219ENST00000522387 XPAP23025 273 aaPredicted RBP12.42□□□□□ -0.42
PABPC1-219ENST00000522387 HNF1BP35680 557 aa12.42□□□□□ -0.42
PABPC1-219ENST00000522387 DRG2P55039 364 aaKnown RBP12.42□□□□□ -0.42
PABPC1-219ENST00000522387 SARNPP82979 210 aaKnown RBP12.42□□□□□ -0.42
PABPC1-219ENST00000522387 CNTN1Q12860 1018 aa12.42□□□□□ -0.42
PABPC1-219ENST00000522387 TPSAB1Q15661 275 aa12.42□□□□□ -0.42
PABPC1-219ENST00000522387 UGP2Q16851 508 aa12.42□□□□□ -0.42
PABPC1-219ENST00000522387 ZNF805Q5CZA5 627 aa12.42□□□□□ -0.42
PABPC1-219ENST00000522387 CCDC121Q6ZUS5 278 aa12.42□□□□□ -0.42
PABPC1-219ENST00000522387 PDIK1LQ8N165 341 aa12.42□□□□□ -0.42
PABPC1-219ENST00000522387 HDDC3Q8N4P3 179 aa12.42□□□□□ -0.42
PABPC1-219ENST00000522387 SIPA1Q96FS4 1042 aa12.42□□□□□ -0.42
PABPC1-219ENST00000522387 WRAP53Q9BUR4 548 aaKnown RBP12.42□□□□□ -0.42
PABPC1-219ENST00000522387 ADGRE3Q9BY15 652 aa12.42□□□□□ -0.42
PABPC1-219ENST00000522387 CPEB1Q9BZB8 566 aaKnown RBP12.42□□□□□ -0.42
PABPC1-219ENST00000522387 MYLKQ15746 1914 aa12.42□□□□□ -0.42
PABPC1-219ENST00000522387 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.42□□□□□ -0.42
PABPC1-219ENST00000522387 FOXO6A8MYZ6 492 aa12.42□□□□□ -0.42
PABPC1-219ENST00000522387 GOLGA8TH3BQL2 631 aa12.42□□□□□ -0.42
PABPC1-219ENST00000522387 HTRA2O43464 458 aaPredicted RBP12.42□□□□□ -0.42
PABPC1-219ENST00000522387 NDST3O95803 873 aa12.42□□□□□ -0.42
PABPC1-219ENST00000522387 ELK3P41970 407 aa12.42□□□□□ -0.42
PABPC1-219ENST00000522387 MAGOHP61326 146 aaKnown RBP12.42□□□□□ -0.42
PABPC1-219ENST00000522387 LRRC32Q14392 662 aa12.42□□□□□ -0.42
PABPC1-219ENST00000522387 QPCTQ16769 361 aa12.42□□□□□ -0.42
PABPC1-219ENST00000522387 EOGTQ5NDL2 527 aa12.42□□□□□ -0.42
PABPC1-219ENST00000522387 TRMT11Q7Z4G4 463 aaKnown RBP12.42□□□□□ -0.42
PABPC1-219ENST00000522387 KDM1BQ8NB78 822 aa12.42□□□□□ -0.42
PABPC1-219ENST00000522387 BBOF1Q8ND07 529 aa12.42□□□□□ -0.42
PABPC1-219ENST00000522387 FBXO36Q8NEA4 188 aa12.42□□□□□ -0.42
PABPC1-219ENST00000522387 MDGA1Q8NFP4 955 aa12.42□□□□□ -0.42
PABPC1-219ENST00000522387 OR2T3Q8NH03 318 aa12.42□□□□□ -0.42
PABPC1-219ENST00000522387 CFAP36Q96G28 342 aa12.42□□□□□ -0.42
PABPC1-219ENST00000522387 FEM1CQ96JP0 617 aa12.42□□□□□ -0.42
PABPC1-219ENST00000522387 OMDQ99983 421 aa12.42□□□□□ -0.42
PABPC1-219ENST00000522387 WDR83Q9BRX9 315 aaKnown RBP12.42□□□□□ -0.42
PABPC1-219ENST00000522387 PABPC3Q9H361 631 aaKnown RBP12.42□□□□□ -0.42
PABPC1-219ENST00000522387 FBXL12Q9NXK8 326 aa12.42□□□□□ -0.42
PABPC1-219ENST00000522387 CD84Q9UIB8 345 aa12.42□□□□□ -0.42
PABPC1-219ENST00000522387 KNL1Q8NG31 2342 aa12.41□□□□□ -0.42
PABPC1-219ENST00000522387 C1orf232A0A0U1RR37 186 aa12.41□□□□□ -0.42
PABPC1-219ENST00000522387 FAM86C2PA6NEL3 165 aa12.41□□□□□ -0.42
PABPC1-219ENST00000522387 FZD6O60353 706 aa12.41□□□□□ -0.42
PABPC1-219ENST00000522387 SUN1O94901 812 aa12.41□□□□□ -0.42
PABPC1-219ENST00000522387 CLDN7O95471 211 aa12.41□□□□□ -0.42
PABPC1-219ENST00000522387 DNTTP04053 509 aa12.41□□□□□ -0.42
PABPC1-219ENST00000522387 ACADMP11310 421 aa12.41□□□□□ -0.42
PABPC1-219ENST00000522387 CES1P23141 567 aa12.41□□□□□ -0.42
PABPC1-219ENST00000522387 DRD3P35462 400 aa12.41□□□□□ -0.42
PABPC1-219ENST00000522387 P2RY2P41231 377 aa12.41□□□□□ -0.42
PABPC1-219ENST00000522387 MAPK8P45983 427 aa12.41□□□□□ -0.42
PABPC1-219ENST00000522387 CSNK1DP48730 415 aa12.41□□□□□ -0.42
PABPC1-219ENST00000522387 ARL4CP56559 192 aa12.41□□□□□ -0.42
PABPC1-219ENST00000522387 RPS14P62263 151 aaKnown RBP12.41□□□□□ -0.42
PABPC1-219ENST00000522387 CWF19L1Q69YN2 538 aaKnown RBP12.41□□□□□ -0.42
PABPC1-219ENST00000522387 LRRC8BQ6P9F7 803 aa12.41□□□□□ -0.42
PABPC1-219ENST00000522387 CCDC91Q7Z6B0 441 aa12.41□□□□□ -0.42
PABPC1-219ENST00000522387 LINC00523Q86TU6 105 aa12.41□□□□□ -0.42
PABPC1-219ENST00000522387 HOOK3Q86VS8 718 aa12.41□□□□□ -0.42
PABPC1-219ENST00000522387 UNC5BQ8IZJ1 945 aa12.41□□□□□ -0.42
PABPC1-219ENST00000522387 ZCCHC9Q8N567 271 aaKnown RBP12.41□□□□□ -0.42
PABPC1-219ENST00000522387 FAM160A2Q8N612 972 aaPredicted RBP12.41□□□□□ -0.42
PABPC1-219ENST00000522387 EPS8L3Q8TE67 593 aaKnown RBP12.41□□□□□ -0.42
PABPC1-219ENST00000522387 MFSD3Q96ES6 412 aa12.41□□□□□ -0.42
PABPC1-219ENST00000522387 OSBPL6Q9BZF3 934 aa12.41□□□□□ -0.42
PABPC1-219ENST00000522387 RSPH9Q9H1X1 276 aaPredicted RBP12.41□□□□□ -0.42
PABPC1-219ENST00000522387 PCDH12Q9NPG4 1184 aa12.41□□□□□ -0.42
PABPC1-219ENST00000522387 MTRF1LQ9UGC7 380 aaKnown RBP12.41□□□□□ -0.42
PABPC1-219ENST00000522387 SLC2A6Q9UGQ3 507 aa12.41□□□□□ -0.42
PABPC1-219ENST00000522387 COQ6Q9Y2Z9 468 aa12.41□□□□□ -0.42
PABPC1-219ENST00000522387 ERI2A8K979 691 aaKnown RBP12.4□□□□□ -0.42
PABPC1-219ENST00000522387 C1QTNF3-AMACRE9PGA6 284 aa12.4□□□□□ -0.42
PABPC1-219ENST00000522387 ZNF189O75820 626 aaPredicted RBP12.4□□□□□ -0.42
PABPC1-219ENST00000522387 TIMP2P16035 220 aa12.4□□□□□ -0.42
PABPC1-219ENST00000522387 GABRG2P18507 467 aa12.4□□□□□ -0.42
PABPC1-219ENST00000522387 CA4P22748 312 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms