RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 SMIM28A0A1B0GU29 152 aa13.86□□□□□ -0.19
SYNPO-205ENST00000522122 H3BN98 237 aa13.86□□□□□ -0.19
SYNPO-205ENST00000522122 GPR25O00155 361 aa13.86□□□□□ -0.19
SYNPO-205ENST00000522122 PABPC1P11940 636 aaKnown RBP13.86□□□□□ -0.19
SYNPO-205ENST00000522122 PTPN9P43378 593 aa13.86□□□□□ -0.19
SYNPO-205ENST00000522122 AQP4P55087 323 aa13.86□□□□□ -0.19
SYNPO-205ENST00000522122 INO80DQ53TQ3 878 aaPredicted RBP13.86□□□□□ -0.19
SYNPO-205ENST00000522122 ADAMTSL2Q86TH1 951 aa13.86□□□□□ -0.19
SYNPO-205ENST00000522122 HEATR4Q86WZ0 1026 aa13.86□□□□□ -0.19
SYNPO-205ENST00000522122 TRIM48Q8IWZ4 208 aa13.86□□□□□ -0.19
SYNPO-205ENST00000522122 BPIFB6Q8NFQ5 453 aa13.86□□□□□ -0.19
SYNPO-205ENST00000522122 SLC7A6OSQ96CW6 309 aaPredicted RBP13.86□□□□□ -0.19
SYNPO-205ENST00000522122 MTFMTQ96DP5 389 aaKnown RBP13.86□□□□□ -0.19
SYNPO-205ENST00000522122 YME1L1Q96TA2 773 aa13.86□□□□□ -0.19
SYNPO-205ENST00000522122 EGFL7Q9UHF1 273 aa13.86□□□□□ -0.19
SYNPO-205ENST00000522122 ZNF536O15090 1300 aa13.86□□□□□ -0.19
SYNPO-205ENST00000522122 CAPN8A6NHC0 703 aa13.86□□□□□ -0.19
SYNPO-205ENST00000522122 SH3BGRLO75368 114 aa13.86□□□□□ -0.19
SYNPO-205ENST00000522122 CATP04040 527 aaKnown RBP13.86□□□□□ -0.19
SYNPO-205ENST00000522122 FGF1P05230 155 aa13.86□□□□□ -0.19
SYNPO-205ENST00000522122 ABL2P42684 1182 aa13.86□□□□□ -0.19
SYNPO-205ENST00000522122 GAD2Q05329 585 aa13.86□□□□□ -0.19
SYNPO-205ENST00000522122 LBX2Q6XYB7 198 aa13.86□□□□□ -0.19
SYNPO-205ENST00000522122 ZNF614Q8N883 585 aa13.86□□□□□ -0.19
SYNPO-205ENST00000522122 TMEM174Q8WUU8 243 aa13.86□□□□□ -0.19
SYNPO-205ENST00000522122 LPPQ93052 612 aa13.86□□□□□ -0.19
SYNPO-205ENST00000522122 OSGEPL1Q9H4B0 414 aa13.86□□□□□ -0.19
SYNPO-205ENST00000522122 CHRAC1Q9NRG0 131 aa13.86□□□□□ -0.19
SYNPO-205ENST00000522122 RSL24D1Q9UHA3 163 aaKnown RBP13.86□□□□□ -0.19
SYNPO-205ENST00000522122 DDX60LQ5H9U9 1706 aaKnown RBP13.85□□□□□ -0.19
SYNPO-205ENST00000522122 COL2A1P02458 1487 aaPredicted RBP13.85□□□□□ -0.19
SYNPO-205ENST00000522122 LPOP22079 712 aaPredicted RBP13.85□□□□□ -0.19
SYNPO-205ENST00000522122 ARL4DP49703 201 aa13.85□□□□□ -0.19
SYNPO-205ENST00000522122 PURAQ00577 322 aaKnown RBP13.85□□□□□ -0.19
SYNPO-205ENST00000522122 GRIK3Q13003 919 aa13.85□□□□□ -0.19
SYNPO-205ENST00000522122 RALGPS1Q5JS13 557 aa13.85□□□□□ -0.19
SYNPO-205ENST00000522122 HECTD3Q5T447 861 aa13.85□□□□□ -0.19
SYNPO-205ENST00000522122 DCLRE1AQ6PJP8 1040 aa13.85□□□□□ -0.19
SYNPO-205ENST00000522122 TXNDC11Q6PKC3 985 aa13.85□□□□□ -0.19
SYNPO-205ENST00000522122 GCNT7Q6ZNI0 430 aa13.85□□□□□ -0.19
SYNPO-205ENST00000522122 CMASQ8NFW8 434 aaPredicted RBP13.85□□□□□ -0.19
SYNPO-205ENST00000522122 REPS1Q96D71 796 aa13.85□□□□□ -0.19
SYNPO-205ENST00000522122 CLK4Q9HAZ1 481 aaKnown RBP13.85□□□□□ -0.19
SYNPO-205ENST00000522122 ATAD3AQ9NVI7 634 aa13.85□□□□□ -0.19
SYNPO-205ENST00000522122 SNX6Q9UNH7 406 aa13.85□□□□□ -0.19
SYNPO-205ENST00000522122 ST3GAL5Q9UNP4 418 aa13.85□□□□□ -0.19
SYNPO-205ENST00000522122 FFAR3O14843 346 aa13.85□□□□□ -0.19
SYNPO-205ENST00000522122 GPR42O15529 346 aa13.85□□□□□ -0.19
SYNPO-205ENST00000522122 DLDP09622 509 aaKnown RBP13.85□□□□□ -0.19
SYNPO-205ENST00000522122 CDH5P33151 784 aaPredicted RBP13.85□□□□□ -0.19
SYNPO-205ENST00000522122 FGD3Q5JSP0 725 aa13.85□□□□□ -0.19
SYNPO-205ENST00000522122 DEFB128Q7Z7B8 93 aa13.85□□□□□ -0.19
SYNPO-205ENST00000522122 PHACTR4Q8IZ21 702 aa13.85□□□□□ -0.19
SYNPO-205ENST00000522122 MTMR14Q8NCE2 650 aa13.85□□□□□ -0.19
SYNPO-205ENST00000522122 C19orf18Q8NEA5 215 aa13.85□□□□□ -0.19
SYNPO-205ENST00000522122 OR4L1Q8NH43 312 aa13.85□□□□□ -0.19
SYNPO-205ENST00000522122 ZFAND2BQ8WV99 257 aa13.85□□□□□ -0.19
SYNPO-205ENST00000522122 ZFP14Q9HCL3 533 aa13.85□□□□□ -0.19
SYNPO-205ENST00000522122 PCDHB12Q9Y5F1 795 aa13.85□□□□□ -0.19
SYNPO-205ENST00000522122 A0A1B0GW55 424 aa13.85□□□□□ -0.19
SYNPO-205ENST00000522122 SLC15A5A6NIM6 579 aa13.85□□□□□ -0.19
SYNPO-205ENST00000522122 FAM159BA6NKW6 160 aa13.85□□□□□ -0.19
SYNPO-205ENST00000522122 NTRK1P04629 796 aa13.85□□□□□ -0.19
SYNPO-205ENST00000522122 LINC00032P0C843 101 aa13.85□□□□□ -0.19
SYNPO-205ENST00000522122 DUX4L2P0CJ85 424 aa13.85□□□□□ -0.19
SYNPO-205ENST00000522122 DUX4L3P0CJ86 424 aa13.85□□□□□ -0.19
SYNPO-205ENST00000522122 DUX4L4P0CJ87 422 aa13.85□□□□□ -0.19
SYNPO-205ENST00000522122 DUX4L5P0CJ88 424 aa13.85□□□□□ -0.19
SYNPO-205ENST00000522122 DUX4L6P0CJ89 424 aa13.85□□□□□ -0.19
SYNPO-205ENST00000522122 DUX4L7P0CJ90 424 aa13.85□□□□□ -0.19
SYNPO-205ENST00000522122 TALDO1P37837 337 aa13.85□□□□□ -0.19
SYNPO-205ENST00000522122 EIF2B2P49770 351 aaKnown RBP13.85□□□□□ -0.19
SYNPO-205ENST00000522122 LIMK2P53671 638 aa13.85□□□□□ -0.19
SYNPO-205ENST00000522122 ITGADQ13349 1161 aa13.85□□□□□ -0.19
SYNPO-205ENST00000522122 DSELQ8IZU8 1212 aa13.85□□□□□ -0.19
SYNPO-205ENST00000522122 DUX4Q9UBX2 424 aa13.85□□□□□ -0.19
SYNPO-205ENST00000522122 DNMT3LQ9UJW3 386 aa13.85□□□□□ -0.19
SYNPO-205ENST00000522122 MYH4Q9Y623 1939 aa13.85□□□□□ -0.19
SYNPO-205ENST00000522122 ALDH1A2O94788 518 aa13.85□□□□□ -0.19
SYNPO-205ENST00000522122 AP2A1O95782 977 aa13.85□□□□□ -0.19
SYNPO-205ENST00000522122 HPCAL1P37235 193 aa13.85□□□□□ -0.19
SYNPO-205ENST00000522122 ZNF132P52740 706 aa13.85□□□□□ -0.19
SYNPO-205ENST00000522122 ATN1P54259 1190 aaPredicted RBP13.85□□□□□ -0.19
SYNPO-205ENST00000522122 ARL13AQ5H913 290 aaPredicted RBP13.85□□□□□ -0.19
SYNPO-205ENST00000522122 ARHGAP36Q6ZRI8 547 aa13.85□□□□□ -0.19
SYNPO-205ENST00000522122 CYP4Z2PQ8N1L4 340 aa13.85□□□□□ -0.19
SYNPO-205ENST00000522122 OR7A2PQ8NGA2 310 aa13.85□□□□□ -0.19
SYNPO-205ENST00000522122 PPTC7Q8NI37 304 aa13.85□□□□□ -0.19
SYNPO-205ENST00000522122 HOPXQ9BPY8 73 aaPredicted RBP13.85□□□□□ -0.19
SYNPO-205ENST00000522122 EBF4Q9BQW3 602 aa13.85□□□□□ -0.19
SYNPO-205ENST00000522122 TIMMDC1Q9NPL8 285 aa13.85□□□□□ -0.19
SYNPO-205ENST00000522122 COPG1Q9Y678 874 aaKnown RBP13.85□□□□□ -0.19
SYNPO-205ENST00000522122 E7ESA3 106 aa13.84□□□□□ -0.19
SYNPO-205ENST00000522122 UGT1A9O60656 530 aa13.84□□□□□ -0.19
SYNPO-205ENST00000522122 PAGE1O75459 146 aa13.84□□□□□ -0.19
SYNPO-205ENST00000522122 OTCP00480 354 aa13.84□□□□□ -0.19
SYNPO-205ENST00000522122 IDH2P48735 452 aaKnown RBP13.84□□□□□ -0.19
SYNPO-205ENST00000522122 RPL38P63173 70 aaKnown RBP13.84□□□□□ -0.19
SYNPO-205ENST00000522122 ZNF618Q5T7W0 954 aa13.84□□□□□ -0.19
SYNPO-205ENST00000522122 RSBN1Q5VWQ0 802 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms