RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 FAM96AQ9H5X1 160 aa18.52■□□□□ 0.55
TRAPPC9-210ENST00000521667 STN1Q9H668 368 aaKnown RBP18.52■□□□□ 0.55
TRAPPC9-210ENST00000521667 IGSF5Q9NSI5 407 aa18.52■□□□□ 0.55
TRAPPC9-210ENST00000521667 PNPOQ9NVS9 261 aa18.52■□□□□ 0.55
TRAPPC9-210ENST00000521667 PLK2Q9NYY3 685 aa18.52■□□□□ 0.55
TRAPPC9-210ENST00000521667 KIAA1522Q9P206 1035 aaPredicted RBP18.52■□□□□ 0.55
TRAPPC9-210ENST00000521667 CORO1CQ9ULV4 474 aaPredicted RBP18.52■□□□□ 0.55
TRAPPC9-210ENST00000521667 FGF19O95750 216 aa18.51■□□□□ 0.55
TRAPPC9-210ENST00000521667 HSPA4LO95757 839 aa18.51■□□□□ 0.55
TRAPPC9-210ENST00000521667 PSMA3P25788 255 aa18.51■□□□□ 0.55
TRAPPC9-210ENST00000521667 EPHA5P54756 1037 aa18.51■□□□□ 0.55
TRAPPC9-210ENST00000521667 SEMA3AQ14563 771 aa18.51■□□□□ 0.55
TRAPPC9-210ENST00000521667 FAM83EQ2M2I3 478 aa18.51■□□□□ 0.55
TRAPPC9-210ENST00000521667 GPR158Q5T848 1215 aa18.51■□□□□ 0.55
TRAPPC9-210ENST00000521667 FAM91A1Q658Y4 838 aa18.51■□□□□ 0.55
TRAPPC9-210ENST00000521667 FAM45BPQ6NSW5 357 aa18.51■□□□□ 0.55
TRAPPC9-210ENST00000521667 RTL10Q7L3V2 364 aa18.51■□□□□ 0.55
TRAPPC9-210ENST00000521667 PACS2Q86VP3 889 aa18.51■□□□□ 0.55
TRAPPC9-210ENST00000521667 OR4K2Q8NGD2 314 aa18.51■□□□□ 0.55
TRAPPC9-210ENST00000521667 FIBINQ8TAL6 211 aa18.51■□□□□ 0.55
TRAPPC9-210ENST00000521667 FAM45AQ8TCE6 357 aa18.51■□□□□ 0.55
TRAPPC9-210ENST00000521667 SH3RF2Q8TEC5 729 aa18.51■□□□□ 0.55
TRAPPC9-210ENST00000521667 INPP5DQ92835 1189 aa18.51■□□□□ 0.55
TRAPPC9-210ENST00000521667 MRPL57Q9BQC6 102 aaKnown RBP18.51■□□□□ 0.55
TRAPPC9-210ENST00000521667 TUBB6Q9BUF5 446 aa18.51■□□□□ 0.55
TRAPPC9-210ENST00000521667 NMUR2Q9GZQ4 415 aa18.51■□□□□ 0.55
TRAPPC9-210ENST00000521667 GPAMQ9HCL2 828 aa18.51■□□□□ 0.55
TRAPPC9-210ENST00000521667 CHD7Q9P2D1 2997 aa18.51■□□□□ 0.55
TRAPPC9-210ENST00000521667 RANBP2P49792 3224 aaKnown RBP18.51■□□□□ 0.55
TRAPPC9-210ENST00000521667 K7ERQ8 282 aa18.5■□□□□ 0.55
TRAPPC9-210ENST00000521667 HNRNPCL1O60812 293 aaKnown RBP18.5■□□□□ 0.55
TRAPPC9-210ENST00000521667 HOXB8P17481 243 aaPredicted RBP18.5■□□□□ 0.55
TRAPPC9-210ENST00000521667 SLC8A1P32418 973 aa18.5■□□□□ 0.55
TRAPPC9-210ENST00000521667 RASSF2P50749 326 aa18.5■□□□□ 0.55
TRAPPC9-210ENST00000521667 AP1S1P61966 158 aa18.5■□□□□ 0.55
TRAPPC9-210ENST00000521667 LMAN2Q12907 356 aa18.5■□□□□ 0.55
TRAPPC9-210ENST00000521667 CSHL1Q14406 222 aa18.5■□□□□ 0.55
TRAPPC9-210ENST00000521667 ATXN7L2Q5T6C5 722 aaPredicted RBP18.5■□□□□ 0.55
TRAPPC9-210ENST00000521667 AGAP9Q5VTM2 703 aa18.5■□□□□ 0.55
TRAPPC9-210ENST00000521667 CYB5D1Q6P9G0 228 aa18.5■□□□□ 0.55
TRAPPC9-210ENST00000521667 AFTPHQ6ULP2 937 aa18.5■□□□□ 0.55
TRAPPC9-210ENST00000521667 MICAL1Q8TDZ2 1067 aa18.5■□□□□ 0.55
TRAPPC9-210ENST00000521667 PRR11Q96HE9 360 aaPredicted RBP18.5■□□□□ 0.55
TRAPPC9-210ENST00000521667 RILPQ96NA2 401 aa18.5■□□□□ 0.55
TRAPPC9-210ENST00000521667 SMIM14Q96QK8 99 aa18.5■□□□□ 0.55
TRAPPC9-210ENST00000521667 EBF4Q9BQW3 602 aa18.5■□□□□ 0.55
TRAPPC9-210ENST00000521667 CLEC4EQ9ULY5 219 aa18.5■□□□□ 0.55
TRAPPC9-210ENST00000521667 CRYL1Q9Y2S2 319 aa18.5■□□□□ 0.55
TRAPPC9-210ENST00000521667 RWDD3Q9Y3V2 267 aa18.5■□□□□ 0.55
TRAPPC9-210ENST00000521667 BPTFQ12830 3046 aa18.5■□□□□ 0.55
TRAPPC9-210ENST00000521667 FZD6O60353 706 aa18.5■□□□□ 0.55
TRAPPC9-210ENST00000521667 DLX3O60479 287 aa18.5■□□□□ 0.55
TRAPPC9-210ENST00000521667 RFPL2O75678 378 aa18.5■□□□□ 0.55
TRAPPC9-210ENST00000521667 CYBBP04839 570 aa18.5■□□□□ 0.55
TRAPPC9-210ENST00000521667 LTA4HP09960 611 aaKnown RBP18.5■□□□□ 0.55
TRAPPC9-210ENST00000521667 MYOGP15173 224 aa18.5■□□□□ 0.55
TRAPPC9-210ENST00000521667 ALOX15P16050 662 aaPredicted RBP18.5■□□□□ 0.55
TRAPPC9-210ENST00000521667 PTPN2P17706 415 aa18.5■□□□□ 0.55
TRAPPC9-210ENST00000521667 LPOP22079 712 aaPredicted RBP18.5■□□□□ 0.55
TRAPPC9-210ENST00000521667 DDX6P26196 483 aaKnown RBP eCLIP18.5■□□□□ 0.55
TRAPPC9-210ENST00000521667 ABL2P42684 1182 aa18.5■□□□□ 0.55
TRAPPC9-210ENST00000521667 GRIA4P48058 902 aa18.5■□□□□ 0.55
TRAPPC9-210ENST00000521667 STC1P52823 247 aa18.5■□□□□ 0.55
TRAPPC9-210ENST00000521667 CDKN2DP55273 166 aa18.5■□□□□ 0.55
TRAPPC9-210ENST00000521667 ELF3P78545 371 aaPredicted RBP18.5■□□□□ 0.55
TRAPPC9-210ENST00000521667 UBE3AQ05086 875 aa18.5■□□□□ 0.55
TRAPPC9-210ENST00000521667 KRT72Q14CN4 511 aa18.5■□□□□ 0.55
TRAPPC9-210ENST00000521667 TYSND1Q2T9J0 566 aa18.5■□□□□ 0.55
TRAPPC9-210ENST00000521667 TTC7BQ86TV6 843 aa18.5■□□□□ 0.55
TRAPPC9-210ENST00000521667 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.5■□□□□ 0.55
TRAPPC9-210ENST00000521667 TCEAL4Q96EI5 215 aa18.5■□□□□ 0.55
TRAPPC9-210ENST00000521667 UBXN10Q96LJ8 280 aa18.5■□□□□ 0.55
TRAPPC9-210ENST00000521667 TMEM237Q96Q45 408 aa18.5■□□□□ 0.55
TRAPPC9-210ENST00000521667 C17orf80Q9BSJ5 609 aa18.5■□□□□ 0.55
TRAPPC9-210ENST00000521667 UNKQ9C0B0 810 aaKnown RBP18.5■□□□□ 0.55
TRAPPC9-210ENST00000521667 MAN1C1Q9NR34 630 aa18.5■□□□□ 0.55
TRAPPC9-210ENST00000521667 LINC01553A4QN01 128 aa18.49■□□□□ 0.55
TRAPPC9-210ENST00000521667 CCDC22O60826 627 aa18.49■□□□□ 0.55
TRAPPC9-210ENST00000521667 SLC4A1P02730 911 aa18.49■□□□□ 0.55
TRAPPC9-210ENST00000521667 CCDC166P0CW27 439 aa18.49■□□□□ 0.55
TRAPPC9-210ENST00000521667 PMLP29590 882 aa18.49■□□□□ 0.55
TRAPPC9-210ENST00000521667 SLC26A3P40879 764 aa18.49■□□□□ 0.55
TRAPPC9-210ENST00000521667 CMTM8Q8IZV2 173 aa18.49■□□□□ 0.55
TRAPPC9-210ENST00000521667 EFHBQ8N7U6 833 aa18.49■□□□□ 0.55
TRAPPC9-210ENST00000521667 SLC7A6OSQ96CW6 309 aaPredicted RBP18.49■□□□□ 0.55
TRAPPC9-210ENST00000521667 TM6SF2Q9BZW4 377 aa18.49■□□□□ 0.55
TRAPPC9-210ENST00000521667 DRC3Q9H069 523 aa18.49■□□□□ 0.55
TRAPPC9-210ENST00000521667 ARL8BQ9NVJ2 186 aa18.49■□□□□ 0.55
TRAPPC9-210ENST00000521667 INTS10Q9NVR2 710 aaKnown RBP18.49■□□□□ 0.55
TRAPPC9-210ENST00000521667 DNAJC28Q9NX36 388 aa18.49■□□□□ 0.55
TRAPPC9-210ENST00000521667 HACD3Q9P035 362 aa18.49■□□□□ 0.55
TRAPPC9-210ENST00000521667 LNPEPQ9UIQ6 1025 aa18.49■□□□□ 0.55
TRAPPC9-210ENST00000521667 CCL26Q9Y258 94 aa18.49■□□□□ 0.55
TRAPPC9-210ENST00000521667 CHD9Q3L8U1 2897 aa18.49■□□□□ 0.55
TRAPPC9-210ENST00000521667 ARHGEF15O94989 841 aa18.49■□□□□ 0.55
TRAPPC9-210ENST00000521667 WISP3O95389 354 aaPredicted RBP18.49■□□□□ 0.55
TRAPPC9-210ENST00000521667 FDXRP22570 491 aa18.49■□□□□ 0.55
TRAPPC9-210ENST00000521667 CD70P32970 193 aa18.49■□□□□ 0.55
TRAPPC9-210ENST00000521667 ASPHQ12797 758 aa18.49■□□□□ 0.55
TRAPPC9-210ENST00000521667 TEAD2Q15562 447 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms