RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 GPD1P21695 349 aa11.54□□□□□ -0.56
MRPS28-206ENST00000520946 MMP12P39900 470 aa11.54□□□□□ -0.56
MRPS28-206ENST00000520946 NSFP46459 744 aaKnown RBP11.54□□□□□ -0.56
MRPS28-206ENST00000520946 B4GALNT1Q00973 533 aa11.54□□□□□ -0.56
MRPS28-206ENST00000520946 TRA2AQ13595 282 aaKnown RBP eCLIP11.54□□□□□ -0.56
MRPS28-206ENST00000520946 AGERQ15109 404 aa11.54□□□□□ -0.56
MRPS28-206ENST00000520946 CYTH1Q15438 398 aa11.54□□□□□ -0.56
MRPS28-206ENST00000520946 RAB6CQ53S08 254 aa11.54□□□□□ -0.56
MRPS28-206ENST00000520946 HSP90AA4PQ58FG1 418 aa11.54□□□□□ -0.56
MRPS28-206ENST00000520946 DCAF12Q5T6F0 453 aa11.54□□□□□ -0.56
MRPS28-206ENST00000520946 KLHDC7AQ5VTJ3 777 aa11.54□□□□□ -0.56
MRPS28-206ENST00000520946 DENND2CQ68D51 928 aa11.54□□□□□ -0.56
MRPS28-206ENST00000520946 NYAP1Q6ZVC0 841 aa11.54□□□□□ -0.56
MRPS28-206ENST00000520946 BNIPLQ7Z465 357 aa11.54□□□□□ -0.56
MRPS28-206ENST00000520946 KDELC2Q7Z4H8 507 aa11.54□□□□□ -0.56
MRPS28-206ENST00000520946 SRLQ86TD4 932 aa11.54□□□□□ -0.56
MRPS28-206ENST00000520946 SLITRK4Q8IW52 837 aa11.54□□□□□ -0.56
MRPS28-206ENST00000520946 MLKLQ8NB16 471 aa11.54□□□□□ -0.56
MRPS28-206ENST00000520946 CCL4L1Q8NHW4 92 aa11.54□□□□□ -0.56
MRPS28-206ENST00000520946 SLC30A5Q8TAD4 765 aa11.54□□□□□ -0.56
MRPS28-206ENST00000520946 C9orf43Q8TAL5 461 aaPredicted RBP11.54□□□□□ -0.56
MRPS28-206ENST00000520946 ART4Q93070 314 aa11.54□□□□□ -0.56
MRPS28-206ENST00000520946 NKD1Q969G9 470 aa11.54□□□□□ -0.56
MRPS28-206ENST00000520946 NTAN1Q96AB6 310 aa11.54□□□□□ -0.56
MRPS28-206ENST00000520946 CCDC74BQ96LY2 380 aa11.54□□□□□ -0.56
MRPS28-206ENST00000520946 NUDT22Q9BRQ3 303 aa11.54□□□□□ -0.56
MRPS28-206ENST00000520946 EFHD1Q9BUP0 239 aa11.54□□□□□ -0.56
MRPS28-206ENST00000520946 CINPQ9BW66 212 aaPredicted RBP11.54□□□□□ -0.56
MRPS28-206ENST00000520946 SLC12A9Q9BXP2 914 aa11.54□□□□□ -0.56
MRPS28-206ENST00000520946 STK33Q9BYT3 514 aa11.54□□□□□ -0.56
MRPS28-206ENST00000520946 MAGEB5Q9BZ81 275 aa11.54□□□□□ -0.56
MRPS28-206ENST00000520946 RAB6CQ9H0N0 254 aa11.54□□□□□ -0.56
MRPS28-206ENST00000520946 CDH19Q9H159 772 aa11.54□□□□□ -0.56
MRPS28-206ENST00000520946 GPN2Q9H9Y4 310 aaPredicted RBP11.54□□□□□ -0.56
MRPS28-206ENST00000520946 ZNF71Q9NQZ8 489 aaPredicted RBP11.54□□□□□ -0.56
MRPS28-206ENST00000520946 KCNK4Q9NYG8 393 aa11.54□□□□□ -0.56
MRPS28-206ENST00000520946 KIAA1468Q9P260 1216 aa11.54□□□□□ -0.56
MRPS28-206ENST00000520946 LHX3Q9UBR4 397 aa11.54□□□□□ -0.56
MRPS28-206ENST00000520946 TUBD1Q9UJT1 453 aa11.54□□□□□ -0.56
MRPS28-206ENST00000520946 IGHV5-10-1A0A0J9YXX1 117 aa11.53□□□□□ -0.56
MRPS28-206ENST00000520946 C2CD4BA6NLJ0 364 aa11.53□□□□□ -0.56
MRPS28-206ENST00000520946 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.53□□□□□ -0.56
MRPS28-206ENST00000520946 FGF10O15520 208 aaPredicted RBP11.53□□□□□ -0.56
MRPS28-206ENST00000520946 B4GAT1O43505 415 aa11.53□□□□□ -0.56
MRPS28-206ENST00000520946 ECEL1O95672 775 aa11.53□□□□□ -0.56
MRPS28-206ENST00000520946 HOXC4P09017 264 aaPredicted RBP11.53□□□□□ -0.56
MRPS28-206ENST00000520946 PRKAR1AP10644 381 aa11.53□□□□□ -0.56
MRPS28-206ENST00000520946 FGF3P11487 239 aaPredicted RBP11.53□□□□□ -0.56
MRPS28-206ENST00000520946 CCNB1P14635 433 aa11.53□□□□□ -0.56
MRPS28-206ENST00000520946 LIFP15018 202 aa11.53□□□□□ -0.56
MRPS28-206ENST00000520946 UCHL3P15374 230 aa11.53□□□□□ -0.56
MRPS28-206ENST00000520946 MMP8P22894 467 aa11.53□□□□□ -0.56
MRPS28-206ENST00000520946 ERCC5P28715 1186 aaPredicted RBP11.53□□□□□ -0.56
MRPS28-206ENST00000520946 CASRP41180 1078 aa11.53□□□□□ -0.56
MRPS28-206ENST00000520946 GPR3P46089 330 aa11.53□□□□□ -0.56
MRPS28-206ENST00000520946 GNPDA1P46926 289 aa11.53□□□□□ -0.56
MRPS28-206ENST00000520946 HDAC4P56524 1084 aa11.53□□□□□ -0.56
MRPS28-206ENST00000520946 TPI1P60174 286 aa11.53□□□□□ -0.56
MRPS28-206ENST00000520946 CDR2Q01850 454 aa11.53□□□□□ -0.56
MRPS28-206ENST00000520946 C1QBPQ07021 282 aaKnown RBP11.53□□□□□ -0.56
MRPS28-206ENST00000520946 IGFBP7Q16270 282 aa11.53□□□□□ -0.56
MRPS28-206ENST00000520946 PNCKQ6P2M8 343 aa11.53□□□□□ -0.56
MRPS28-206ENST00000520946 SLC30A9Q6PML9 568 aa11.53□□□□□ -0.56
MRPS28-206ENST00000520946 LIPIQ6XZB0 460 aa11.53□□□□□ -0.56
MRPS28-206ENST00000520946 TRIM72Q6ZMU5 477 aa11.53□□□□□ -0.56
MRPS28-206ENST00000520946 TMPRSS9Q7Z410 1059 aa11.53□□□□□ -0.56
MRPS28-206ENST00000520946 ATCAYQ86WG3 371 aa11.53□□□□□ -0.56
MRPS28-206ENST00000520946 LURAP1LQ8IV03 231 aa11.53□□□□□ -0.56
MRPS28-206ENST00000520946 SFTPA2Q8IWL1 248 aa11.53□□□□□ -0.56
MRPS28-206ENST00000520946 PYROXD2Q8N2H3 581 aa11.53□□□□□ -0.56
MRPS28-206ENST00000520946 JOSD2Q8TAC2 188 aa11.53□□□□□ -0.56
MRPS28-206ENST00000520946 PDCD6IPQ8WUM4 868 aaKnown RBP11.53□□□□□ -0.56
MRPS28-206ENST00000520946 DPYSL5Q9BPU6 564 aa11.53□□□□□ -0.56
MRPS28-206ENST00000520946 KLC2Q9H0B6 622 aa11.53□□□□□ -0.56
MRPS28-206ENST00000520946 EPN3Q9H201 632 aa11.53□□□□□ -0.56
MRPS28-206ENST00000520946 SP110Q9HB58 689 aa11.53□□□□□ -0.56
MRPS28-206ENST00000520946 LRRC4CQ9HCJ2 640 aa11.53□□□□□ -0.56
MRPS28-206ENST00000520946 SPATS2LQ9NUQ6 558 aaKnown RBP11.53□□□□□ -0.56
MRPS28-206ENST00000520946 ADAM22Q9P0K1 906 aa11.53□□□□□ -0.56
MRPS28-206ENST00000520946 TAAR2Q9P1P5 351 aa11.53□□□□□ -0.56
MRPS28-206ENST00000520946 DACH1Q9UI36 760 aa11.53□□□□□ -0.56
MRPS28-206ENST00000520946 TSPAN11A1L157 253 aa11.52□□□□□ -0.57
MRPS28-206ENST00000520946 EFCAB7A8K855 629 aa11.52□□□□□ -0.57
MRPS28-206ENST00000520946 F8VZ95 297 aa11.52□□□□□ -0.57
MRPS28-206ENST00000520946 BUB1BO60566 1050 aaPredicted RBP11.52□□□□□ -0.57
MRPS28-206ENST00000520946 RAD1O60671 282 aa11.52□□□□□ -0.57
MRPS28-206ENST00000520946 CALB1P05937 261 aa11.52□□□□□ -0.57
MRPS28-206ENST00000520946 MYCLP1P12525 358 aaPredicted RBP11.52□□□□□ -0.57
MRPS28-206ENST00000520946 MPSTP25325 297 aa11.52□□□□□ -0.57
MRPS28-206ENST00000520946 UGT1A3P35503 534 aa11.52□□□□□ -0.57
MRPS28-206ENST00000520946 SCNN1BP51168 640 aa11.52□□□□□ -0.57
MRPS28-206ENST00000520946 COPB1P53618 953 aaKnown RBP11.52□□□□□ -0.57
MRPS28-206ENST00000520946 LIMK2P53671 638 aa11.52□□□□□ -0.57
MRPS28-206ENST00000520946 RAB15P59190 212 aa11.52□□□□□ -0.57
MRPS28-206ENST00000520946 MC1RQ01726 317 aa11.52□□□□□ -0.57
MRPS28-206ENST00000520946 C4orf17Q53FE4 359 aa11.52□□□□□ -0.57
MRPS28-206ENST00000520946 SNAP47Q5SQN1 464 aa11.52□□□□□ -0.57
MRPS28-206ENST00000520946 ARTNQ5T4W7 220 aa11.52□□□□□ -0.57
MRPS28-206ENST00000520946 NKAIN2Q5VXU1 208 aa11.52□□□□□ -0.57
MRPS28-206ENST00000520946 DNAJC24Q6P3W2 148 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms